Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 1.2e-236 822.8 409 100.0
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.5e-236 822.4 409 99.8
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 6.4e-198 694.1 414 82.4
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.0e-195 685.3 414 82.6
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 2.1e-193 679.1 413 81.8
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 7.3e-186 654.1 411 79.1
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 7.3e-186 654.1 411 79.1
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 9.5e-186 653.7 411 79.1
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.2e-183 646.7 418 76.1
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 3.9e-179 631.7 411 76.9
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.6e-177 626.3 411 75.7
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 1.8e-176 622.9 411 74.7
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.0e-176 621.7 414 75.1
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 1.2e-175 620.2 415 73.7
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.7e-174 616.3 415 74.7
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.7e-174 616.3 414 74.6
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 8.4e-174 614.0 412 74.3
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 2.4e-173 612.5 422 73.0
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 3.2e-173 612.1 415 74.2
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 9.2e-173 610.5 411 74.7
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 2.7e-172 609.0 406 75.9
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.5e-172 608.6 410 72.9
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.0e-171 605.5 410 72.7
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 3.9e-171 605.1 417 73.6
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 8.7e-171 604.0 438 70.8
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 3.6e-169 598.6 424 72.2
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 2.4e-168 595.9 425 71.8
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 3.1e-168 595.5 423 71.4
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 3.1e-168 595.5 417 71.9
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.5e-167 593.2 425 70.6
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 3.4e-167 592.0 423 70.4
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 9.9e-167 590.5 423 70.4
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 6.4e-166 587.8 409 70.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 6.4e-166 587.8 423 69.5
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 8.4e-166 587.4 421 69.8
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 8.4e-166 587.4 423 70.0
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 9.3e-165 583.9 417 70.3
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 1.2e-164 583.6 423 69.0
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 7.8e-164 580.9 418 70.3
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 1.0e-163 580.5 418 70.3
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.3e-163 579.3 417 71.2
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 5.1e-163 578.2 415 69.6
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 6.6e-163 577.8 409 69.2
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 4.3e-162 575.1 415 68.7
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 9.6e-162 573.9 413 70.9
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 2.8e-161 572.4 410 71.5
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.8e-161 572.4 413 70.2
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 8.1e-161 570.9 421 70.3
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 6.9e-160 567.8 410 68.5
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 3.4e-159 565.5 423 68.8
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 7.6e-159 564.3 418 67.9
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 1.9e-157 559.7 417 68.3
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 9.3e-157 557.4 416 69.2
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.2e-156 557.0 410 68.3
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 4.6e-156 555.1 418 68.4
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 1.3e-155 553.5 417 68.1
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 3.0e-155 552.4 410 67.1
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 5.1e-155 551.6 417 68.3
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 1.1e-154 550.4 410 67.6
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.5e-154 550.1 412 68.4
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.5e-154 550.1 409 68.0
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 9.6e-154 547.4 418 67.5
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 9.6e-154 547.4 416 68.0
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 2.8e-153 545.8 411 67.9
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 1.2e-151 540.4 409 67.2
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 7.6e-151 537.7 418 66.7
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 7.6e-151 537.7 422 66.4
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 4.9e-150 535.0 417 66.7
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 8.4e-150 534.3 417 66.7
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.9e-149 533.1 415 67.0
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.9e-149 533.1 415 67.0
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.9e-149 533.1 415 67.0
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 3.2e-149 532.3 414 66.9
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 9.3e-149 530.8 409 65.8
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 3.5e-148 528.9 409 65.5
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 3.5e-148 528.9 409 65.5
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 2.8e-145 519.2 416 66.3
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 4.8e-145 518.5 424 64.9
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.1e-144 515.8 408 64.7
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 6.9e-144 514.6 425 64.2
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 2.0e-143 513.1 409 66.5
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.3e-142 510.4 410 65.6
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 3.8e-142 508.8 422 63.7
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.1e-141 507.3 409 64.1
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 3.2e-141 505.8 404 64.9
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 2.7e-140 502.7 410 63.7
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 2.3e-139 499.6 415 62.4
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 3.9e-139 498.8 387 66.7
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.3e-137 493.8 406 62.3
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.2e-137 493.0 405 63.5
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.4e-136 490.3 476 56.7
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.6e-132 476.9 402 62.7
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.4e-128 463.0 364 65.9
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 7.2e-125 451.4 408 59.6
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 1.8e-120 436.8 464 50.9
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 1.5e-119 433.7 409 56.0
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.3e-118 430.6 251 85.7
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.7e-110 403.7 349 61.3
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.1e-109 401.0 254 79.1
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 6.3e-105 385.2 239 79.9
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 4.7e-100 369.0 472 44.1
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.2e-98 364.4 414 48.3
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.2e-95 354.4 416 48.1
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.3e-94 350.9 298 62.4
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 1.9e-93 347.1 470 43.8
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.7e-89 334.0 248 68.5
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 3.9e-78 296.2 439 41.5
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 7.3e-77 292.0 287 55.7
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.1e-75 288.1 182 76.9
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 1.3e-44 184.9 163 52.8
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 8.7e-38 162.2 499 27.9
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.1e-36 157.5 172 46.5
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.4e-35 154.1 484 26.7
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 2.6e-34 150.6 444 29.1
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 4.2e-32 143.3 195 44.6
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 8.7e-30 135.6 165 45.5
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 2.5e-24 117.5 108 54.6
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.2e-23 115.2 98 62.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 3.0e-22 110.5 70 77.1
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 8.8e-14 82.4 126 39.7


User provided reference genes

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