Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 8.5e-103 377.1 203 100.0
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 1.4e-100 369.8 204 96.1
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 1.8e-60 236.5 203 61.1
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 1.2e-59 233.8 204 62.3
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 3.8e-58 228.8 207 61.8
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 1.4e-57 226.9 203 62.1
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 3.2e-57 225.7 208 67.3
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 2.1e-56 223.0 205 59.5
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 2.7e-56 222.6 212 58.0
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 3.5e-56 222.2 205 59.0
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 3.5e-56 222.2 210 60.0
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 3.5e-56 222.2 212 59.4
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 1.3e-55 220.3 218 57.3
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 3.0e-55 219.2 157 68.8
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.1e-54 217.2 211 57.3
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 1.5e-54 216.9 203 57.6
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 1.9e-54 216.5 209 59.8
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 1.9e-54 216.5 215 56.7
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 2.5e-54 216.1 214 56.5
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.5e-54 216.1 203 56.7
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.5e-54 216.1 203 56.7
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 4.3e-54 215.3 215 56.3
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 5.6e-54 214.9 179 60.9
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 5.6e-54 214.9 203 60.1
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 5.6e-54 214.9 185 61.1
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.6e-53 213.4 211 56.4
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 3.6e-53 212.2 210 56.2
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 4.8e-53 211.8 152 68.4
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 8.1e-53 211.1 210 55.7
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 1.1e-52 210.7 207 55.1
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 2.4e-52 209.5 210 55.7
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 2.4e-52 209.5 209 56.0
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 3.1e-52 209.1 203 57.6
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 5.3e-52 208.4 172 61.6
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 6.9e-52 208.0 153 68.0
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 1.5e-51 206.8 170 61.8
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 2.0e-51 206.5 207 54.1
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 3.4e-51 205.7 222 54.1
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 3.4e-51 205.7 204 56.4
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 3.4e-51 205.7 182 59.3
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 4.4e-51 205.3 150 69.3
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 4.4e-51 205.3 146 70.5
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 4.4e-51 205.3 218 53.7
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 5.8e-51 204.9 204 56.9
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 7.6e-51 204.5 153 66.7
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 9.9e-51 204.1 209 54.5
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 9.9e-51 204.1 209 54.5
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.3e-50 203.8 209 54.5
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 1.7e-50 203.4 204 55.4
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 2.2e-50 203.0 156 66.0
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 2.2e-50 203.0 178 60.7
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 2.9e-50 202.6 220 54.1
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 3.8e-50 202.2 211 52.6
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 3.8e-50 202.2 177 61.0
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 3.8e-50 202.2 208 54.8
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 4.9e-50 201.8 208 54.8
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 8.4e-50 201.1 172 60.5
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 1.1e-49 200.7 206 55.3
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 1.1e-49 200.7 158 63.3
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 1.4e-49 200.3 202 54.0
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.4e-49 200.3 200 55.0
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.4e-49 200.3 167 64.1
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 1.9e-49 199.9 168 61.3
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 1.9e-49 199.9 156 62.8
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 2.4e-49 199.5 173 60.1
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 2.4e-49 199.5 208 54.3
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 2.4e-49 199.5 208 54.8
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 5.4e-49 198.4 172 59.9
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 5.4e-49 198.4 118 78.8
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 7.1e-49 198.0 156 62.2
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 9.3e-49 197.6 176 60.2
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 1.2e-48 197.2 176 59.1
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 1.2e-48 197.2 138 70.3
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 1.2e-48 197.2 167 58.7
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 1.2e-48 197.2 172 61.6
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 2.1e-48 196.4 127 74.0
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 2.1e-48 196.4 127 74.0
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 4.6e-48 195.3 211 53.6
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 6.0e-48 194.9 124 74.2
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 1.3e-47 193.7 149 67.1
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 3.0e-47 192.6 170 57.6
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 5.1e-47 191.8 171 57.3
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 6.6e-47 191.4 156 62.2
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 1.5e-46 190.3 154 60.4
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 1.5e-46 190.3 171 61.4
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 1.5e-46 190.3 150 64.0
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 1.5e-46 190.3 150 64.0
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 1.5e-46 190.3 187 54.0
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 1.9e-46 189.9 158 61.4
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 1.9e-46 189.9 158 61.4
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 1.9e-46 189.9 150 64.0
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 1.9e-46 189.9 194 54.1
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 2.5e-46 189.5 113 77.0
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 3.3e-46 189.1 197 52.8
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 3.3e-46 189.1 113 76.1
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 4.3e-46 188.7 129 69.0
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 7.3e-46 188.0 158 58.2
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 9.6e-46 187.6 138 65.9
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 2.8e-45 186.0 182 57.7
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 2.8e-45 186.0 163 59.5
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 1.8e-44 183.3 166 57.8
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 2.4e-44 183.0 185 54.1
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 2.4e-44 183.0 164 53.7
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 2.4e-44 183.0 185 51.9
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.2e-43 180.6 146 58.2
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 2.6e-43 179.5 150 58.7
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 3.4e-43 179.1 171 55.6
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 7.6e-43 177.9 153 58.8
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 6.4e-42 174.9 178 50.0
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 3.2e-41 172.6 164 54.3
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 5.5e-41 171.8 179 52.5
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 2.7e-40 169.5 148 54.7
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 2.7e-40 169.5 166 52.4
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 6.0e-40 168.3 153 56.2
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.3e-39 167.2 118 66.1
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 1.9e-38 163.3 108 67.6
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 9.6e-38 161.0 113 64.6
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 3.7e-37 159.1 130 61.5
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 3.1e-36 156.0 172 50.0
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 3.1e-36 156.0 145 53.8
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 1.1e-33 147.5 133 55.6
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 3.9e-31 139.0 109 58.7
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 5.3e-28 128.6 151 49.7
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 1.3e-26 124.0 113 51.3
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 2.7e-24 116.3 137 41.6
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 6.1e-24 115.2 103 53.4
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 5.0e-18 95.5 90 54.4
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 1.0e-07 61.2 129 36.4


User provided reference genes

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