Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0362 Papaver somniferum HOM05D010315 ORTHO05D016663 1.1e-130 470.7 393 100.0
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 1.1e-29 135.2 285 33.3
PSO063G6719 Papaver somniferum HOM05D015807 ORTHO05D000090 1.3e-19 101.7 81 61.7
PSO732G0024 Papaver somniferum HOM05D000162 ORTHO05D000090 2.5e-18 97.4 104 49.0
PSO017G0734 Papaver somniferum HOM05D000162 ORTHO05D000090 6.2e-17 92.8 87 54.0
PSO017G5411 Papaver somniferum HOM05D000162 ORTHO05D000090 1.8e-16 91.3 118 44.1
PSO210G3738 Papaver somniferum HOM05D010315 ORTHO05D011376 1.5e-15 88.2 84 56.0
PSO210G7725 Papaver somniferum HOM05D010315 ORTHO05D011376 9.9e-15 85.5 86 53.5
PSO732G0487 Papaver somniferum HOM05D000162 ORTHO05D000090 4.9e-14 83.2 223 46.2
PSO063G6560 Papaver somniferum HOM05D000162 ORTHO05D000090 2.4e-13 80.9 119 42.0
PSO063G0531 Papaver somniferum HOM05D000162 ORTHO05D000090 7.1e-13 79.3 83 53.0
PSO017G1775 Papaver somniferum HOM05D000162 ORTHO05D000090 1.2e-12 78.6 107 43.0
PSO675G8780 Papaver somniferum HOM05D000162 ORTHO05D000090 2.1e-12 77.8 82 54.9
PSO675G0716 Papaver somniferum HOM05D000162 ORTHO05D000090 4.6e-12 76.6 107 41.1
PSO675G2912 Papaver somniferum HOM05D000162 ORTHO05D000090 1.8e-11 74.7 82 51.2
PSO675G3325 Papaver somniferum HOM05D016375 ORTHO05D011376 3.0e-11 73.9 81 46.9
PSO063G7407 Papaver somniferum HOM05D000162 ORTHO05D000090 8.7e-11 72.4 82 50.0
PSO675G6024 Papaver somniferum HOM05D000162 ORTHO05D000090 8.7e-11 72.4 102 41.2
PSO732G0062 Papaver somniferum HOM05D000162 ORTHO05D000090 8.7e-11 72.4 49 71.4
PSO675G0744 Papaver somniferum HOM05D000162 ORTHO05D000090 1.1e-10 72.0 102 42.2
PSO378G0001 Papaver somniferum HOM05D000162 ORTHO05D000090 1.5e-10 71.6 82 50.0
PSO675G4027 Papaver somniferum HOM05D000162 ORTHO05D000090 1.5e-10 71.6 82 50.0
PSO675G5902 Papaver somniferum HOM05D000162 ORTHO05D000090 1.5e-10 71.6 82 50.0
PSO229G0164 Papaver somniferum HOM05D000162 ORTHO05D000090 2.5e-10 70.9 82 52.4
PSO675G3369 Papaver somniferum HOM05D000162 ORTHO05D000090 2.5e-10 70.9 58 62.1
PSO732G0429 Papaver somniferum HOM05D000162 ORTHO05D000090 3.3e-10 70.5 107 38.3
PSO675G0884 Papaver somniferum HOM05D000162 ORTHO05D000090 4.3e-10 70.1 101 41.6
PSO675G1057 Papaver somniferum HOM05D000162 ORTHO05D000090 4.3e-10 70.1 83 48.2
PSO732G0225 Papaver somniferum HOM05D000162 ORTHO05D000090 4.3e-10 70.1 102 39.2
PSO675G0651 Papaver somniferum HOM05D000162 ORTHO05D000090 5.6e-10 69.7 108 38.0
PSO675G1267 Papaver somniferum HOM05D000162 ORTHO05D000090 5.6e-10 69.7 105 38.1
QL08p052740 Quercus lobata HOM05D000162 ORTHO05D000090 5.6e-10 69.7 72 45.8
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 7.4e-10 69.3 84 42.9
PSO732G0790 Papaver somniferum HOM05D000162 ORTHO05D000090 1.3e-09 68.6 84 47.6
PSO675G7877 Papaver somniferum HOM05D000162 ORTHO05D000090 1.6e-09 68.2 82 50.0
PSO017G5081 Papaver somniferum HOM05D000162 ORTHO05D000090 2.1e-09 67.8 53 64.2
Sp3g30160 Schrenkiella parvula HOM05D005287 ORTHO05D006893 2.1e-09 67.8 83 37.3
PSO063G4718 Papaver somniferum HOM05D000162 ORTHO05D010954 2.8e-09 67.4 36 83.3
PSO017G5385 Papaver somniferum HOM05D029812 ORTHO05D016663 3.7e-09 67.0 75 42.7
PSO732G0095 Papaver somniferum HOM05D000162 ORTHO05D000090 4.8e-09 66.6 49 65.3
PSO675G8928 Papaver somniferum HOM05D000162 ORTHO05D000090 6.2e-09 66.2 59 54.2
CARHR087740 Cardamine hirsuta HOM05D000891 ORTHO05D000761 8.2e-09 65.9 85 36.5
PSO063G0380 Papaver somniferum HOM05D000162 ORTHO05D000090 8.2e-09 65.9 85 45.9
PSO729G0261 Papaver somniferum HOM05D000162 ORTHO05D000090 8.2e-09 65.9 59 55.9
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 1.1e-08 65.5 67 43.3
Sp3g11320 Schrenkiella parvula HOM05D000891 ORTHO05D000761 1.1e-08 65.5 84 36.9
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 1.4e-08 65.1 86 36.0
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 1.8e-08 64.7 67 41.8
AT3G13150 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 2.4e-08 64.3 85 35.3
BcaB03g16413 Brassica carinata HOM05D005287 ORTHO05D006893 2.4e-08 64.3 83 36.1
PSO675G5632 Papaver somniferum HOM05D000162 ORTHO05D000090 2.4e-08 64.3 59 54.2
AL3G24890 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 3.1e-08 63.9 85 35.3
CARHR107150 Cardamine hirsuta HOM05D005287 ORTHO05D006893 3.1e-08 63.9 83 32.5
PSO063G0011 Papaver somniferum HOM05D010315 ORTHO05D011376 3.1e-08 63.9 75 45.3
RcHm_v2.0_Chr5g0074231 Rosa chinensis HOM05D009519 ORTHO05D010307 3.1e-08 63.9 76 40.8
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 4.0e-08 63.5 67 41.8
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 4.0e-08 63.5 67 41.8
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 5.3e-08 63.2 86 34.9
FAN02G3427 Fragaria x ananassa HOM05D000855 ORTHO05D008530 5.3e-08 63.2 71 38.0
FAN09G2418 Fragaria x ananassa HOM05D000855 ORTHO05D008530 5.3e-08 63.2 71 38.0
FAN14G2211 Fragaria x ananassa HOM05D000855 ORTHO05D008530 5.3e-08 63.2 71 38.0
PSO732G0543 Papaver somniferum HOM05D000162 ORTHO05D000090 5.3e-08 63.2 102 35.3
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 5.3e-08 63.2 67 41.8
HPP92_017937 Vanilla planifolia HOM05D000855 ORTHO05D008530 5.3e-08 63.2 71 40.8
A01p40400 Brassica napus HOM05D000891 ORTHO05D000761 6.9e-08 62.8 85 34.1
C01p51940 Brassica napus HOM05D000891 ORTHO05D000761 6.9e-08 62.8 85 34.1
BolC1t05142H Brassica oleracea HOM05D000891 ORTHO05D000761 6.9e-08 62.8 85 34.1
BraA01t04075Z Brassica rapa HOM05D000891 ORTHO05D000761 6.9e-08 62.8 85 34.1
Thhalv10022574m.g Eutrema salsugineum HOM05D005287 ORTHO05D006893 6.9e-08 62.8 83 34.9
FvH4_6g15290 Fragaria vesca HOM05D000855 ORTHO05D008530 6.9e-08 62.8 71 38.0
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 6.9e-08 62.8 71 39.4
Prupe.6G241600 Prunus persica HOM05D000855 ORTHO05D008530 6.9e-08 62.8 86 34.9
Sc20g0004090 Simmondsia chinensis HOM05D000855 ORTHO05D008530 6.9e-08 62.8 67 40.3
AL3G49590 Arabidopsis lyrata HOM05D005287 ORTHO05D006893 9.0e-08 62.4 83 31.3
AT2G16880 Arabidopsis thaliana HOM05D005287 ORTHO05D006893 9.0e-08 62.4 83 31.3
Carub.0003s1249 Capsella rubella HOM05D000891 ORTHO05D000761 1.2e-07 62.0 84 34.5
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 1.2e-07 62.0 67 40.3
PSO017G0842 Papaver somniferum HOM05D000162 ORTHO05D000090 1.2e-07 62.0 60 55.0
PSO017G4889 Papaver somniferum HOM05D000162 ORTHO05D000090 1.2e-07 62.0 60 55.0
PSO063G1965 Papaver somniferum HOM05D000162 ORTHO05D000090 1.2e-07 62.0 46 67.4
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 1.2e-07 62.0 68 38.2
PSO832G1482 Papaver somniferum HOM05D000030 ORTHO05D000031 1.2e-07 62.0 33 78.8
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 1.2e-07 62.0 86 36.0
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 1.2e-07 62.0 67 38.8
Cfa017505 Carpinus fangiana HOM05D000855 ORTHO05D008530 1.5e-07 61.6 67 40.3
Haze_20657 Corylus avellana HOM05D000855 ORTHO05D008530 1.5e-07 61.6 67 40.3
Migut.F01800 Erythranthe guttata HOM05D005287 ORTHO05D006893 1.5e-07 61.6 78 35.9
MBI12_g09049_MAGBIO Magnolia biondii HOM05D029812 ORTHO05D016663 1.5e-07 61.6 47 63.8
SalBow3G1200 Salvia bowleyana HOM05D000855 ORTHO05D008530 1.5e-07 61.6 67 38.8
SalBow3G1712 Salvia bowleyana HOM05D000855 ORTHO05D008530 1.5e-07 61.6 67 38.8
AT3G09650 Arabidopsis thaliana HOM05D000855 ORTHO05D008530 2.0e-07 61.2 67 38.8
A07p04270 Brassica napus HOM05D005287 ORTHO05D006893 2.0e-07 61.2 83 33.7
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 2.0e-07 61.2 84 34.5
BraA07t28218Z Brassica rapa HOM05D005287 ORTHO05D006893 2.0e-07 61.2 83 33.7
AUR62040505 Chenopodium quinoa HOM05D000855 ORTHO05D008530 2.0e-07 61.2 65 40.0
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 2.0e-07 61.2 67 38.8
Hma1.2p1_0111F.1_g053860 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 2.0e-07 61.2 67 38.8
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 2.0e-07 61.2 86 34.9
Ah.08g211930 Amaranthus hybridus HOM05D000855 ORTHO05D008530 2.6e-07 60.8 67 37.3
ATR0564G055 Amborella trichopoda HOM05D002986 ORTHO05D007611 2.6e-07 60.8 86 36.0
CsaV3_3G035530 Cucumis sativus L. HOM05D000855 ORTHO05D008530 2.6e-07 60.8 67 41.8
Lalb_Chr02g0153641 Lupinus albus HOM05D000855 ORTHO05D008530 2.6e-07 60.8 71 39.4
PSO675G6237 Papaver somniferum HOM05D010315 ORTHO05D050183 2.6e-07 60.8 66 48.5
Zm00001eb156000 Zea mays HOM05D000855 ORTHO05D008530 2.6e-07 60.8 67 37.3
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 3.4e-07 60.5 83 34.9
Eucgr.K03209 Eucalyptus grandis HOM05D000855 ORTHO05D008530 3.4e-07 60.5 67 40.3
Thhalv10020781m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 3.4e-07 60.5 85 34.1
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 3.4e-07 60.5 67 40.3
Psat6g067680 Pisum sativum HOM05D000855 ORTHO05D008530 3.4e-07 60.5 67 40.3
Atru.BG.218.p Acer truncatum HOM05D000855 ORTHO05D008530 4.5e-07 60.1 67 37.3
AUR62042604 Chenopodium quinoa HOM05D000855 ORTHO05D008530 4.5e-07 60.1 65 40.0
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.5e-07 60.1 89 39.3
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 4.5e-07 60.1 71 38.0
ECA240G4052 Erigeron canadensis HOM05D000162 ORTHO05D000090 5.8e-07 59.7 73 38.4
MBI12_g09300_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D008530 5.8e-07 59.7 86 33.7
ClCG10G020580 Citrullus lanatus HOM05D001673 ORTHO05D002312 7.6e-07 59.3 67 40.3
Ciclev10026953m.g Citrus clementina HOM05D006556 ORTHO05D008146 7.6e-07 59.3 83 36.1
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 7.6e-07 59.3 67 37.3
FAN28G1277 Fragaria x ananassa HOM05D007168 ORTHO05D000355 7.6e-07 59.3 92 29.3
PSO832G3774 Papaver somniferum HOM05D015807 ORTHO05D016663 7.6e-07 59.3 33 75.8
Actinidia04698 Actinidia chinensis HOM05D000855 ORTHO05D008530 1.0e-06 58.9 67 38.8
Aa31LG8G350 Aethionema arabicum HOM05D000891 ORTHO05D000761 1.0e-06 58.9 85 31.8
MELO3C009312.2 Cucumis melo HOM05D000855 ORTHO05D008530 1.0e-06 58.9 67 40.3
EL10Ac7g17347 Beta vulgaris HOM05D000855 ORTHO05D008530 1.3e-06 58.5 67 38.8
Sabra16G0092100 Salix brachista HOM05D000855 ORTHO05D008530 1.3e-06 58.5 86 33.7
Thecc.04G296100 Theobroma cacao HOM05D002444 ORTHO05D009235 1.3e-06 58.5 81 32.1
Thecc.05G053600 Theobroma cacao HOM05D000855 ORTHO05D008530 1.3e-06 58.5 67 38.8
TPR.G30250 Trifolium pratense HOM05D000855 ORTHO05D008530 1.3e-06 58.5 67 37.3
Ciclev10011148m.g Citrus clementina HOM05D000855 ORTHO05D008530 1.7e-06 58.2 67 37.3
Lsat_1_v5_gn_3_111340 Lactuca sativa HOM05D000162 ORTHO05D016663 1.7e-06 58.2 61 41.0
MD03G1106100 Malus domestica HOM05D031184 ORTHO05D010307 1.7e-06 58.2 73 39.7
Nn2g12986 Nelumbo nucifera HOM05D000855 ORTHO05D008530 1.7e-06 58.2 67 37.3
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 1.7e-06 58.2 80 30.0
Aqoxy4G03187 Aquilegia oxysepala HOM05D000855 ORTHO05D008530 2.2e-06 57.8 67 37.3
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 2.2e-06 57.8 80 32.5
CsaV3_3G031700 Cucumis sativus L. HOM05D003039 ORTHO05D009478 2.2e-06 57.8 46 47.8
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 2.2e-06 57.8 83 36.1
PSO832G0443 Papaver somniferum HOM05D015807 ORTHO05D000090 2.2e-06 57.8 33 72.7
THA.LOC104822733 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 2.2e-06 57.8 86 31.4
Aa31LG8G14080 Aethionema arabicum HOM05D005287 ORTHO05D006893 2.9e-06 57.4 83 28.9
CSS0013853 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 2.9e-06 57.4 67 37.3
CSS0023086 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 2.9e-06 57.4 67 37.3
Eucgr.G02802 Eucalyptus grandis HOM05D005287 ORTHO05D006893 2.9e-06 57.4 80 36.2
Lj5g0021887 Lotus japonicus HOM05D000855 ORTHO05D008530 2.9e-06 57.4 67 37.3
Manes.16G016000 Manihot esculenta HOM05D000891 ORTHO05D000761 2.9e-06 57.4 85 30.6
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 2.9e-06 57.4 79 34.2
CAN.G479.71 Capsicum annuum HOM05D007173 ORTHO05D009151 3.8e-06 57.0 85 32.9
Lalb_Chr02g0154271 Lupinus albus HOM05D006596 ORTHO05D008497 3.8e-06 57.0 83 33.7
Manes.05G012004 Manihot esculenta HOM05D003039 ORTHO05D009478 3.8e-06 57.0 84 32.1
PSO675G7582 Papaver somniferum HOM05D000162 ORTHO05D000090 3.8e-06 57.0 83 42.2
PSO782G3573 Papaver somniferum HOM05D000162 ORTHO05D000090 3.8e-06 57.0 36 66.7
PSO832G0277 Papaver somniferum HOM05D002295 ORTHO05D002789 3.8e-06 57.0 35 65.7
Peaxi162Scf00231g00042 Petunia axillaris HOM05D007173 ORTHO05D009151 3.8e-06 57.0 85 32.9
QL07p045308 Quercus lobata HOM05D000855 ORTHO05D008530 3.8e-06 57.0 67 37.3
Sabra11G0025500 Salix brachista HOM05D000891 ORTHO05D000761 3.8e-06 57.0 85 29.4
Ah.07g205900 Amaranthus hybridus HOM05D000001 ORTHO05D000003 4.9e-06 56.6 72 38.9
Aqoxy7G03329 Aquilegia oxysepala HOM05D003039 ORTHO05D009478 4.9e-06 56.6 49 42.9
arahy.Tifrunner.gnm1.ann1.QIT2C2 Arachis hypogaea HOM05D002453 ORTHO05D008746 4.9e-06 56.6 85 36.5
Gorai.006G247100 Gossypium raimondii HOM05D000162 ORTHO05D000090 4.9e-06 56.6 118 31.4
PSO063G7574 Papaver somniferum HOM05D000162 ORTHO05D000090 4.9e-06 56.6 44 63.6
Potri.019G062332 Populus trichocarpa HOM05D024593 ORTHO05D010307 4.9e-06 56.6 74 37.8
RcHm_v2.0_Chr5g0074191 Rosa chinensis HOM05D009519 ORTHO05D010307 4.9e-06 56.6 66 39.4
PGSC0003DMG400021711 Solanum tuberosum HOM05D000891 ORTHO05D000761 4.9e-06 56.6 80 32.5
VMungo1383G3318 Vigna mungo HOM05D000855 ORTHO05D019456 4.9e-06 56.6 78 30.8
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 4.9e-06 56.6 70 38.6
MBI16_g21730_MAGBIO Magnolia biondii HOM05D002825 ORTHO05D003824 6.5e-06 56.2 84 33.3
PSO732G0162 Papaver somniferum HOM05D000162 ORTHO05D000090 6.5e-06 56.2 97 36.1
QL04p076570 Quercus lobata HOM05D000162 ORTHO05D000090 6.5e-06 56.2 93 33.3
Zm00001eb059330 Zea mays HOM05D011046 ORTHO05D013342 6.5e-06 56.2 70 38.6
Zm00001eb121340 Zea mays HOM05D011046 ORTHO05D013342 6.5e-06 56.2 70 38.6
Zm00001eb398710 Zea mays HOM05D011046 ORTHO05D013342 6.5e-06 56.2 70 38.6
Aqoxy3G04285 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 8.4e-06 55.8 80 32.5
CiPaw.02G077000 Carya illinoinensis HOM05D000855 ORTHO05D008530 8.4e-06 55.8 56 41.1
Lj2P868T14 Lonicera japonica HOM05D003039 ORTHO05D009478 8.4e-06 55.8 41 53.7
Zm00001eb230400 Zea mays HOM05D000104 ORTHO05D009920 8.4e-06 55.8 86 38.4


User provided reference genes

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