Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 0.0e+00 3574.3 1832 100.0
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 0.0e+00 3362.8 1827 94.4
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 0.0e+00 2219.5 1850 63.6
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 0.0e+00 2003.0 1852 58.7
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 0.0e+00 2002.3 1870 58.6
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 0.0e+00 1971.4 1850 57.8
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 0.0e+00 1958.3 1858 57.1
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 0.0e+00 1951.4 1846 57.1
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 0.0e+00 1931.8 1845 57.3
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 0.0e+00 1929.5 2055 53.1
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 0.0e+00 1903.6 1860 55.8
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 0.0e+00 1900.2 1879 55.9
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 0.0e+00 1885.2 1856 56.1
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 0.0e+00 1882.1 1862 56.0
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 0.0e+00 1875.5 1841 55.8
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 0.0e+00 1872.8 1848 55.9
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 0.0e+00 1846.6 1682 59.5
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 0.0e+00 1839.7 1838 54.2
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 0.0e+00 1833.5 1846 54.2
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 0.0e+00 1821.6 1860 54.0
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 0.0e+00 1821.2 1855 53.4
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 0.0e+00 1806.6 1846 53.1
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 0.0e+00 1805.0 1851 54.5
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 0.0e+00 1797.3 1847 53.3
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 0.0e+00 1781.9 1855 53.0
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 0.0e+00 1771.9 1847 52.5
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 0.0e+00 1771.5 1850 53.6
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 0.0e+00 1770.4 1849 52.9
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 0.0e+00 1768.8 1850 53.7
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 0.0e+00 1767.3 1841 52.9
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 0.0e+00 1763.8 1844 53.0
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 0.0e+00 1755.0 1840 52.8
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 0.0e+00 1745.3 1854 51.5
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 0.0e+00 1730.3 1905 50.9
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 0.0e+00 1729.1 1832 52.7
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 0.0e+00 1708.7 1893 50.7
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 0.0e+00 1702.2 1848 52.2
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 0.0e+00 1699.9 1845 51.4
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 0.0e+00 1697.2 1514 59.9
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 0.0e+00 1696.8 1849 51.3
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 0.0e+00 1696.4 1818 52.3
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 0.0e+00 1696.0 1844 51.3
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 0.0e+00 1695.6 1756 53.0
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 0.0e+00 1691.4 1823 51.5
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 0.0e+00 1684.8 1845 51.3
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 0.0e+00 1683.7 1848 51.0
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 0.0e+00 1683.7 1853 51.6
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 0.0e+00 1682.2 1850 51.1
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 0.0e+00 1676.4 1853 50.5
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 0.0e+00 1675.6 1855 50.9
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 0.0e+00 1675.6 1843 50.9
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 0.0e+00 1671.8 1547 57.5
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 0.0e+00 1671.0 1846 50.5
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 0.0e+00 1671.0 1870 50.4
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 0.0e+00 1669.4 1742 53.6
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 0.0e+00 1664.4 1857 51.1
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 0.0e+00 1659.4 1846 50.7
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 0.0e+00 1658.3 1851 50.4
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 0.0e+00 1657.5 1851 50.5
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 0.0e+00 1656.0 1926 50.8
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 0.0e+00 1654.8 1865 51.2
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 0.0e+00 1619.8 1838 50.4
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 0.0e+00 1617.8 1854 49.9
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 0.0e+00 1612.4 1850 49.9
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 0.0e+00 1592.0 1853 48.9
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 0.0e+00 1582.0 1857 48.9
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 0.0e+00 1563.5 1759 49.7
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 0.0e+00 1545.4 1850 48.9
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 0.0e+00 1524.6 1653 52.5
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 0.0e+00 1505.7 1845 47.7
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 0.0e+00 1503.0 1539 54.3
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 0.0e+00 1474.9 1603 50.9
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 0.0e+00 1384.0 1886 44.0
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 0.0e+00 1376.7 1167 62.5
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 0.0e+00 1374.0 1442 52.1
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 0.0e+00 1311.6 1428 50.7
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 0.0e+00 1234.6 1451 49.4
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 0.0e+00 1122.8 1013 58.9
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 0.0e+00 1094.7 953 60.8
ClCG10G002230 Citrullus lanatus HOM05D003893 ORTHO05D005167 0.0e+00 1092.8 1068 56.2
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 0.0e+00 1083.9 1398 45.6
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 2.8e-309 1066.2 1916 35.9
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 3.0e-308 1062.8 1729 39.6
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 2.3e-300 1036.6 1362 46.1
SalBow1G5499 Salvia bowleyana HOM05D003893 ORTHO05D005167 2.9e-274 949.9 1002 53.6
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 1.2e-272 944.5 1481 41.5
SalBow1G1311 Salvia bowleyana HOM05D003893 ORTHO05D005167 2.1e-253 880.6 795 59.9
Hma1.2p1_0840F.1_g226640 Hydrangea macrophylla HOM05D003893 ORTHO05D005167 3.6e-240 836.6 800 57.9
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 6.1e-232 809.3 955 48.8
BcaNung07386 Brassica carinata HOM05D003893 ORTHO05D005167 5.7e-198 696.4 736 55.6
QL01p036487 Quercus lobata HOM05D003893 ORTHO05D005167 1.2e-182 645.6 514 66.0
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 6.2e-176 623.2 1502 31.4
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 2.1e-136 491.9 608 44.2
Psat4g075840 Pisum sativum HOM05D003893 ORTHO05D005167 1.5e-134 485.7 406 62.3
TPR.G17142 Trifolium pratense HOM05D003893 ORTHO05D005167 1.4e-132 479.2 403 61.5
Haze_08368 Corylus avellana HOM05D003893 ORTHO05D005167 2.3e-130 471.9 479 54.9
SalBow1G6370 Salvia bowleyana HOM05D003893 ORTHO05D005167 8.2e-128 463.4 620 42.9
Nitab4.5_0000500g0310 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.0e-122 446.4 410 60.7
ClCG10G002220 Citrullus lanatus HOM05D003893 ORTHO05D005167 1.1e-121 443.0 571 44.5
vmacro17756 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 1.5e-118 432.6 433 57.7
VMungo0251G0173 Vigna mungo HOM05D003893 ORTHO05D005167 5.7e-113 414.1 391 56.3
CDE12G0047 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 7.0e-111 407.1 544 43.0
Nitab4.5_0009451g0060 Nicotiana tabacum HOM05D003893 ORTHO05D005167 3.6e-107 394.8 336 62.2
Haze_08369 Corylus avellana HOM05D003893 ORTHO05D005167 2.8e-104 385.2 311 65.0
Ca_30503_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 4.7e-91 341.3 283 63.3
Nitab4.5_0009451g0070 Nicotiana tabacum HOM05D003893 ORTHO05D005167 7.5e-89 334.0 587 35.6
SalBow1G0831 Salvia bowleyana HOM05D003893 ORTHO05D005167 7.7e-86 323.9 477 41.9
Haze_08365 Corylus avellana HOM05D003893 ORTHO05D005167 5.0e-85 321.2 370 51.1
Haze_08367 Corylus avellana HOM05D003893 ORTHO05D005167 1.6e-83 316.2 347 53.6
ATR0665G055 Amborella trichopoda HOM05D003893 ORTHO05D005167 8.0e-83 313.9 490 40.8
Hund14480 Selenicereus undatus HOM05D003893 ORTHO05D005167 3.7e-80 305.1 307 54.7
COL.COLO4_22133 Corchorus olitorius HOM05D003893 ORTHO05D005167 8.6e-77 293.9 499 38.3
SEGI_27963 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 4.7e-75 288.1 508 35.8
Haze_08366 Corylus avellana HOM05D003893 ORTHO05D005167 2.0e-73 282.7 254 55.9
Cpa.g.sc2698.1 Carica papaya HOM05D003893 ORTHO05D005167 4.4e-73 281.6 179 79.3
CDE12G0573 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 7.8e-70 270.8 181 74.6
CBR_g21115 Chara braunii HOM05D003893 ORTHO05D005167 3.0e-69 268.9 410 42.4
Os03g0100500 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 9.5e-68 263.8 214 65.0
Cre01.g027350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 2.4e-63 249.2 548 33.0
PRCOL_00006953 Prasinoderma coloniale HOM05D003893 ORTHO05D005167 2.3e-58 232.6 795 26.4
Migut.E01263 Erythranthe guttata HOM05D003893 ORTHO05D005167 3.1e-58 232.3 369 37.9
Psat7g156960 Pisum sativum HOM05D003893 ORTHO05D005167 5.8e-57 228.0 394 37.1
CDE12G0397 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 4.1e-55 221.9 400 36.2
SMO364G0317 Selaginella moellendorffii HOM05D003893 ORTHO05D005167 1.2e-54 220.3 178 61.2
CBR_g21120 Chara braunii HOM05D003893 ORTHO05D005167 3.0e-53 215.7 882 25.6
VMungo0251G2570 Vigna mungo HOM05D003893 ORTHO05D005167 2.1e-51 209.5 138 74.6
VMungo0251G2254 Vigna mungo HOM05D003893 ORTHO05D005167 1.1e-47 197.2 107 87.9
arahy.Tifrunner.gnm1.ann1.NA56E9 Arachis hypogaea HOM05D003893 ORTHO05D005167 2.3e-45 189.5 143 67.1
Rhsim11G0002000 Rhododendron simsii HOM05D003893 ORTHO05D005167 1.5e-44 186.8 112 83.0
Nitab4.5_0026472g0010 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.3e-43 183.7 427 33.7
CiPaw.11G072500 Carya illinoinensis HOM05D003893 ORTHO05D005167 2.0e-41 176.4 305 37.7
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 2.4e-39 169.5 147 53.7
COL.COLO4_04209 Corchorus olitorius HOM05D003893 ORTHO05D005167 2.3e-37 162.9 188 50.5
CBR_g21119 Chara braunii HOM05D000019 ORTHO05D005167 1.9e-36 159.8 202 41.6
COL.COLO4_04210 Corchorus olitorius HOM05D003893 ORTHO05D005167 2.1e-35 156.4 154 55.2
Cre15.g637350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 5.5e-31 141.7 150 44.7
arahy.Tifrunner.gnm1.ann1.L0U5DT Arachis hypogaea HOM05D003893 ORTHO05D005167 7.1e-31 141.4 149 53.0
arahy.Tifrunner.gnm1.ann1.LQQ75E Arachis hypogaea HOM05D003893 ORTHO05D005167 1.0e-29 137.5 85 77.6
arahy.Tifrunner.gnm1.ann1.MLK8WM Arachis hypogaea HOM05D003893 ORTHO05D005167 1.0e-29 137.5 85 78.8
Os10g0142900 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 1.0e-29 137.5 179 41.9
Cpa.g.sc98.30 Carica papaya HOM05D003893 ORTHO05D005167 8.7e-29 134.4 159 47.2
SEGI_19363 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 6.2e-27 128.3 131 52.7
Gohir.D02G139050 Gossypium hirsutum HOM05D003893 ORTHO05D005167 2.2e-24 119.8 82 67.1
Gorai.005G158100 Gossypium raimondii HOM05D003893 ORTHO05D005167 6.5e-24 118.2 82 67.1
Gohir.D11G202680 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.9e-23 116.7 82 67.1
arahy.Tifrunner.gnm1.ann1.9S00H1 Arachis hypogaea HOM05D003893 ORTHO05D005167 3.2e-23 115.9 72 76.4
arahy.Tifrunner.gnm1.ann1.FKEW18 Arachis hypogaea HOM05D003893 ORTHO05D005167 5.5e-23 115.2 134 48.5
ATR0665G236 Amborella trichopoda HOM05D003893 ORTHO05D005167 7.1e-23 114.8 157 41.4
SEGI_09425 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 1.3e-19 104.0 170 35.9
Ah.07g199170 Amaranthus hybridus HOM05D003893 ORTHO05D005167 2.1e-19 103.2 54 88.9
Gohir.A11G196650 Gossypium hirsutum HOM05D003893 ORTHO05D005167 2.8e-19 102.8 82 59.8
arahy.Tifrunner.gnm1.ann1.T8TVPL Arachis hypogaea HOM05D000826 ORTHO05D006448 2.2e-16 93.2 70 67.1
arahy.Tifrunner.gnm1.ann1.QNR9EZ Arachis hypogaea HOM05D000826 ORTHO05D006448 4.2e-15 89.0 70 65.7
arahy.Tifrunner.gnm1.ann1.UB4SVV Arachis hypogaea HOM05D003893 ORTHO05D005167 3.5e-14 85.9 64 67.2
Gorai.002G189000 Gossypium raimondii HOM05D003893 ORTHO05D047700 5.1e-13 82.0 63 60.3
arahy.Tifrunner.gnm1.ann1.BV66IC Arachis hypogaea HOM05D000826 ORTHO05D006448 1.9e-12 80.1 49 77.6
arahy.Tifrunner.gnm1.ann1.T26UD0 Arachis hypogaea HOM05D000826 ORTHO05D006448 1.9e-12 80.1 49 77.6
arahy.Tifrunner.gnm1.ann1.V6RYFZ Arachis hypogaea HOM05D000826 ORTHO05D006448 1.9e-12 80.1 49 77.6
arahy.Tifrunner.gnm1.ann1.AZ80GT Arachis hypogaea HOM05D000826 ORTHO05D006448 2.2e-11 76.6 48 75.0
BcaC08g45749 Brassica carinata HOM05D003893 ORTHO05D021800 8.2e-11 74.7 247 30.4
BcaC09g49809 Brassica carinata HOM05D003893 ORTHO05D017260 1.4e-10 73.9 120 37.5
C01p32750 Brassica napus HOM05D003893 ORTHO05D017260 1.8e-10 73.6 144 34.7
Ah.07g199150 Amaranthus hybridus HOM05D003893 ORTHO05D017260 5.3e-10 72.0 79 51.9
Gohir.D01G152650 Gossypium hirsutum HOM05D003893 ORTHO05D047700 6.9e-10 71.6 63 54.0
C05p27230 Brassica napus HOM05D003893 ORTHO05D005167 4.5e-09 68.9 113 38.1
COL.COLO4_00031 Corchorus olitorius HOM05D003893 ORTHO05D005167 4.5e-09 68.9 114 36.8
A01p25860 Brassica napus HOM05D003893 ORTHO05D017260 8.5e-08 64.7 109 37.6
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 1.4e-07 63.9 168 26.2
BcaC05g26842 Brassica carinata HOM05D003893 ORTHO05D021800 1.6e-06 60.5 77 42.9
BcaNung07323 Brassica carinata HOM05D003893 ORTHO05D005167 1.6e-06 60.5 45 62.2
CAN.G466.3 Capsicum annuum HOM05D003893 ORTHO05D005167 2.1e-06 60.1 63 44.4
PSO017G5227 Papaver somniferum HOM05D003893 ORTHO05D303226 6.1e-06 58.5 44 70.5
BolC5t31436H Brassica oleracea HOM05D003893 ORTHO05D021800 7.9e-06 58.2 145 30.3


User provided reference genes

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