Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO729G0102 Papaver somniferum HOM05D003018 ORTHO05D003402 4.9e-54 214.2 104 100.0
PSO729G0279 Papaver somniferum HOM05D003018 ORTHO05D003402 7.3e-42 173.7 85 96.5
PSO017G0083 Papaver somniferum HOM05D003018 ORTHO05D003402 1.3e-41 172.9 82 100.0
PSO339G1784 Papaver somniferum HOM05D003018 ORTHO05D003402 1.4e-24 116.3 86 62.8
PSO832G1145 Papaver somniferum HOM05D003018 ORTHO05D003402 1.4e-24 116.3 74 73.0
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.2e-23 113.2 80 66.2
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.2e-23 113.2 80 66.2
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 2.6e-23 112.1 80 63.8
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 2.6e-23 112.1 80 65.0
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 5.8e-23 110.9 80 63.8
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 7.6e-23 110.5 80 63.8
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.0e-22 110.2 80 65.0
CARHR158570 Cardamine hirsuta HOM05D003018 ORTHO05D003402 1.3e-22 109.8 88 60.2
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 1.3e-22 109.8 80 65.0
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 1.3e-22 109.8 80 63.8
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 1.3e-22 109.8 80 63.8
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 1.3e-22 109.8 80 63.8
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 1.3e-22 109.8 80 63.8
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.7e-22 109.4 88 58.0
Eucgr.K00528 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.7e-22 109.4 88 58.0
Gohir.A11G017100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.2e-22 109.0 88 61.4
GSVIVG01038683001 Vitis vinifera HOM05D003018 ORTHO05D003402 2.2e-22 109.0 79 64.6
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 2.9e-22 108.6 80 62.5
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 2.9e-22 108.6 80 62.5
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.9e-22 108.6 88 61.4
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 2.9e-22 108.6 80 62.5
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 2.9e-22 108.6 80 62.5
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 3.8e-22 108.2 80 61.2
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 3.8e-22 108.2 80 61.2
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 5.0e-22 107.8 86 60.5
A06p18200 Brassica napus HOM05D003018 ORTHO05D003402 6.5e-22 107.5 79 67.1
BraA06t24904Z Brassica rapa HOM05D003018 ORTHO05D003402 6.5e-22 107.5 79 67.1
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 6.5e-22 107.5 79 63.3
DCAR_010557 Daucus carota HOM05D003018 ORTHO05D003402 6.5e-22 107.5 80 63.8
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 6.5e-22 107.5 80 62.5
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 6.5e-22 107.5 80 63.8
Duzib084G0455 Durio zibethinus HOM05D003018 ORTHO05D003402 8.4e-22 107.1 80 62.5
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 8.4e-22 107.1 80 63.8
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 8.4e-22 107.1 79 64.6
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 1.1e-21 106.7 80 61.2
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 1.1e-21 106.7 80 60.0
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 1.1e-21 106.7 79 63.3
BcaNung01249 Brassica carinata HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
BcaNung02005 Brassica carinata HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
A06p35470 Brassica napus HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
C07p43070 Brassica napus HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
C08p05060 Brassica napus HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
BolC7t44834H Brassica oleracea HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
BraA06t26470Z Brassica rapa HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
Sp2g22740 Schrenkiella parvula HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 65.0
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 1.4e-21 106.3 80 62.5
Thhalv10010930m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 1.9e-21 105.9 80 63.8
Lj1g0024936 Lotus japonicus HOM05D003018 ORTHO05D003402 1.9e-21 105.9 80 61.2
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 2.5e-21 105.5 79 60.8
CsaV3_5G000150 Cucumis sativus L. HOM05D003018 ORTHO05D003402 2.5e-21 105.5 80 60.0
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 2.5e-21 105.5 80 61.2
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 2.5e-21 105.5 80 61.2
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 3.2e-21 105.1 80 61.2
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 3.2e-21 105.1 79 62.0
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 4.2e-21 104.8 80 61.2
CiPaw.05G208700 Carya illinoinensis HOM05D003018 ORTHO05D003402 4.2e-21 104.8 79 60.8
Thhalv10004788m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 4.2e-21 104.8 80 62.5
THA.LOC104798993 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 4.2e-21 104.8 80 65.0
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 4.2e-21 104.8 80 60.0
AL5G29400 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 7.2e-21 104.0 80 62.5
AL6G36250 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 7.2e-21 104.0 80 63.8
AT5G24650 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 7.2e-21 104.0 80 63.8
BcaC07g39417 Brassica carinata HOM05D003018 ORTHO05D003402 7.2e-21 104.0 75 66.7
C08p24540 Brassica napus HOM05D003018 ORTHO05D003402 7.2e-21 104.0 75 66.7
BolC8t50072H Brassica oleracea HOM05D003018 ORTHO05D003402 7.2e-21 104.0 75 66.7
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 7.2e-21 104.0 79 60.8
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 7.2e-21 104.0 80 61.2
Carub.0006s2250 Capsella rubella HOM05D003018 ORTHO05D003402 9.3e-21 103.6 80 63.8
CARHR188810 Cardamine hirsuta HOM05D003018 ORTHO05D003402 9.3e-21 103.6 80 62.5
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 9.3e-21 103.6 80 58.8
ECA232G4756 Erigeron canadensis HOM05D003018 ORTHO05D003402 9.3e-21 103.6 82 59.8
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 1.2e-20 103.2 80 58.8
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 1.2e-20 103.2 80 58.8
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 1.2e-20 103.2 84 59.5
Carub.0005s1589 Capsella rubella HOM05D003018 ORTHO05D003402 1.2e-20 103.2 80 62.5
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 1.6e-20 102.8 80 58.8
AT3G49560 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 2.1e-20 102.4 80 61.2
SalBow4G0431 Salvia bowleyana HOM05D003018 ORTHO05D003402 2.1e-20 102.4 79 59.5
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 2.1e-20 102.4 83 60.2
unitig_62.g23859 Utricularia gibba HOM05D003018 ORTHO05D003402 2.1e-20 102.4 79 62.0
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 2.7e-20 102.1 80 62.5
Aa31LG4G18050 Aethionema arabicum HOM05D003018 ORTHO05D003402 2.7e-20 102.1 80 61.2
Gohir.A09G187100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.7e-20 102.1 74 64.9
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 2.7e-20 102.1 80 58.8
Sed0009908 Sechium edule HOM05D003018 ORTHO05D003402 2.7e-20 102.1 80 58.8
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 7.9e-20 100.5 80 57.5
SEGI_14341 Sequoiadendron giganteum HOM05D003018 ORTHO05D003402 7.9e-20 100.5 84 54.8
Zm00001eb242440 Zea mays HOM05D003018 ORTHO05D003402 7.9e-20 100.5 75 64.0
Lalb_Chr08g0239401 Lupinus albus HOM05D003018 ORTHO05D003402 1.0e-19 100.1 80 58.8
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 1.3e-19 99.8 63 71.4
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.3e-19 99.8 77 61.0
Os04g0405100 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 1.3e-19 99.8 77 61.0
unitig_52.g16865 Utricularia gibba HOM05D003018 ORTHO05D003402 1.3e-19 99.8 75 62.7
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 1.8e-19 99.4 79 58.2
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 2.3e-19 99.0 80 60.0
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 2.3e-19 99.0 65 70.8
THA.LOC104814958 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 2.3e-19 99.0 80 61.2
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 3.0e-19 98.6 92 55.4
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 3.9e-19 98.2 74 60.8
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 3.9e-19 98.2 91 52.7
unitig_64.g29776 Utricularia gibba HOM05D000525 ORTHO05D001368 3.9e-19 98.2 72 63.9
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 6.7e-19 97.4 80 55.0
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 8.7e-19 97.1 82 57.3
AUR62005947 Chenopodium quinoa HOM05D003018 ORTHO05D003402 1.1e-18 96.7 81 58.0
AUR62028118 Chenopodium quinoa HOM05D003018 ORTHO05D003402 1.1e-18 96.7 81 58.0
Sed0018717 Sechium edule HOM05D003018 ORTHO05D003402 1.1e-18 96.7 64 67.2
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 1.5e-18 96.3 77 58.4
BcaB01g00697 Brassica carinata HOM05D003018 ORTHO05D003402 1.5e-18 96.3 75 62.7
CiPaw.05G209100 Carya illinoinensis HOM05D003018 ORTHO05D003402 1.5e-18 96.3 74 60.8
FAN10G1538 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.5e-18 96.3 89 52.8
Sp5g12550 Schrenkiella parvula HOM05D003018 ORTHO05D003402 1.5e-18 96.3 75 62.7
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 1.9e-18 95.9 81 60.5
FAN03G3459 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.9e-18 95.9 89 52.8
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 1.9e-18 95.9 74 62.2
FvH4_7g33330 Fragaria vesca HOM05D003018 ORTHO05D003402 2.5e-18 95.5 89 52.8
Psat5g071120 Pisum sativum HOM05D003018 ORTHO05D003402 2.5e-18 95.5 74 59.5
FAN10G3922 Fragaria x ananassa HOM05D003018 ORTHO05D003402 4.3e-18 94.7 89 51.7
EL10Ac3g05130 Beta vulgaris HOM05D003018 ORTHO05D003402 5.7e-18 94.4 82 57.3
Aa31LG11G3900 Aethionema arabicum HOM05D003018 ORTHO05D003402 7.4e-18 94.0 75 61.3
FAN01G2324 Fragaria x ananassa HOM05D003018 ORTHO05D003402 9.7e-18 93.6 89 51.7
Hma1.2p1_0115F.1_g055830 Hydrangea macrophylla HOM05D003018 ORTHO05D003402 9.7e-18 93.6 74 59.5
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 1.3e-17 93.2 80 55.0
Mapoly0083s0018 Marchantia polymorpha HOM05D003018 ORTHO05D003402 2.2e-17 92.4 75 58.7
Zm00001eb181270 Zea mays HOM05D003018 ORTHO05D003402 2.2e-17 92.4 73 61.6
BcaC06g31152 Brassica carinata HOM05D003018 ORTHO05D003402 2.8e-17 92.0 57 73.7
C07p34140 Brassica napus HOM05D003018 ORTHO05D003402 2.8e-17 92.0 57 73.7
BolC7t43927H Brassica oleracea HOM05D003018 ORTHO05D003402 2.8e-17 92.0 57 73.7
BolC7t43940H Brassica oleracea HOM05D003018 ORTHO05D003402 2.8e-17 92.0 57 73.7
TPR.G35918 Trifolium pratense HOM05D003018 ORTHO05D003402 4.8e-17 91.3 80 51.2
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 6.3e-17 90.9 74 58.1
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 6.3e-17 90.9 74 58.1
PSO339G5858 Papaver somniferum HOM05D003018 ORTHO05D003402 6.3e-17 90.9 71 60.6
Sc19g0000360 Simmondsia chinensis HOM05D003018 ORTHO05D003402 8.2e-17 90.5 80 53.8
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 1.1e-16 90.1 89 50.6
Lsat_1_v5_gn_2_3400 Lactuca sativa HOM05D003018 ORTHO05D003402 1.8e-16 89.4 71 63.4
Zm00001eb084410 Zea mays HOM05D003018 ORTHO05D003402 1.8e-16 89.4 63 68.3
SMO356G0102 Selaginella moellendorffii HOM05D003018 ORTHO05D003402 5.3e-16 87.8 78 52.6
vmacro06209 Vaccinium macrocarpon HOM05D003018 ORTHO05D003502 5.3e-16 87.8 63 61.9
BcaC06g31155 Brassica carinata HOM05D003018 ORTHO05D003402 1.2e-15 86.7 61 65.6
BolC7t43925H Brassica oleracea HOM05D003018 ORTHO05D003402 1.2e-15 86.7 61 65.6
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 2.0e-15 85.9 99 45.5
A06p42880 Brassica napus HOM05D003018 ORTHO05D003402 5.9e-15 84.3 57 66.7
BraA06t27200Z Brassica rapa HOM05D003018 ORTHO05D003402 5.9e-15 84.3 57 66.7
BcaC06g31150 Brassica carinata HOM05D003018 ORTHO05D003402 1.0e-14 83.6 57 70.2
C07p34160 Brassica napus HOM05D003018 ORTHO05D003402 1.0e-14 83.6 57 70.2
BolC7t43931H Brassica oleracea HOM05D003018 ORTHO05D003402 1.0e-14 83.6 57 70.2
Pp3c16_18310 Physcomitrium patens HOM05D025156 ORTHO05D003402 1.0e-14 83.6 59 64.4
Haze_00335 Corylus avellana HOM05D003018 ORTHO05D003402 1.7e-14 82.8 79 51.9
BcaC06g31154 Brassica carinata HOM05D003018 ORTHO05D032594 3.8e-14 81.6 57 68.4
C07p34120 Brassica napus HOM05D003018 ORTHO05D032594 3.8e-14 81.6 57 68.4
BolC7t43926H Brassica oleracea HOM05D003018 ORTHO05D032594 3.8e-14 81.6 57 68.4
A06p42910 Brassica napus HOM05D003018 ORTHO05D003402 8.5e-14 80.5 57 66.7
CBR_g48001 Chara braunii HOM05D003018 ORTHO05D003402 3.2e-13 78.6 60 66.7
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 4.2e-13 78.2 80 50.0
Cc02_g00590 Coffea canephora HOM05D003018 ORTHO05D003402 1.2e-12 76.6 80 47.5
PRCOL_00000888 Prasinoderma coloniale HOM05D003018 ORTHO05D003402 1.6e-12 76.3 56 66.1
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 2.7e-12 75.5 83 48.2
BcaB08g34602 Brassica carinata HOM05D003018 ORTHO05D003402 4.6e-12 74.7 57 61.4
PSO339G1829 Papaver somniferum HOM05D003018 ORTHO05D003402 1.0e-11 73.6 66 54.5
Pp3c16_18078 Physcomitrium patens HOM05D003018 ORTHO05D003402 1.8e-11 72.8 61 59.0
Pp3c16_18085 Physcomitrium patens HOM05D003018 ORTHO05D003402 1.8e-11 72.8 61 59.0
C07p34110 Brassica napus HOM05D003018 ORTHO05D003402 5.1e-11 71.2 83 47.0
MCO01G667 Micromonas commoda HOM05D003018 ORTHO05D003402 5.1e-11 71.2 57 57.9
PSO782G4498 Papaver somniferum HOM05D003018 ORTHO05D003402 2.0e-10 69.3 46 69.6
PSO339G6351 Papaver somniferum HOM05D003018 ORTHO05D003402 7.4e-10 67.4 84 46.4
Nn7g35801 Nelumbo nucifera HOM05D003018 ORTHO05D003402 9.7e-10 67.0 55 60.0
PSO675G9013 Papaver somniferum HOM05D003018 ORTHO05D003402 9.7e-10 67.0 70 45.7
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 1.7e-09 66.2 77 45.5
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 2.2e-09 65.9 82 42.7
Cre03.g183100 Chlamydomonas reinhardtii HOM05D003018 ORTHO05D003402 2.2e-09 65.9 56 55.4
Cpa.g.sc3.188 Carica papaya HOM05D003018 ORTHO05D003402 6.3e-09 64.3 56 57.1
ClCG01G000020 Citrullus lanatus HOM05D003018 ORTHO05D003402 6.3e-09 64.3 52 57.7
Sabra15G0000400 Salix brachista HOM05D003018 ORTHO05D003402 6.3e-09 64.3 52 59.6
ClCG00G004180 Citrullus lanatus HOM05D003018 ORTHO05D003402 1.4e-08 63.2 52 57.7
MELO3C005915.2 Cucumis melo HOM05D003018 ORTHO05D003402 1.4e-08 63.2 52 57.7
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 6.9e-08 60.8 60 51.7
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 5.9e-07 57.8 52 57.7
HanXRQChr15g0497021 Helianthus annuus HOM05D003018 ORTHO05D003402 1.3e-06 56.6 37 75.7
PSO724G0429 Papaver somniferum HOM05D003018 ORTHO05D003402 1.7e-06 56.2 24 100.0
PSO339G5652 Papaver somniferum HOM05D003018 ORTHO05D003402 2.9e-06 55.5 33 75.8


User provided reference genes

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