Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G1248 Papaver somniferum HOM05D004097 ORTHO05D005352 1.1e-95 353.2 174 100.0
PSO675G1898 Papaver somniferum HOM05D004097 ORTHO05D005352 3.3e-63 245.4 204 65.7
PSO017G2193 Papaver somniferum HOM05D004097 ORTHO05D005352 4.7e-49 198.4 198 54.0
PSO478G3686 Papaver somniferum HOM05D004097 ORTHO05D005352 2.6e-47 192.6 155 62.6
Aqoxy5G03417 Aquilegia oxysepala HOM05D004097 ORTHO05D005352 1.2e-44 183.7 197 49.7
MBI11_g07450_MAGBIO Magnolia biondii HOM05D004097 ORTHO05D005352 4.2e-42 175.3 195 48.7
TAR629G3065 Trochodendron aralioides HOM05D004097 ORTHO05D005352 9.4e-42 174.1 198 45.5
Nn4g22358 Nelumbo nucifera HOM05D004097 ORTHO05D005352 1.6e-41 173.3 155 55.5
GSVIVG01010441001 Vitis vinifera HOM05D004097 ORTHO05D005352 6.1e-41 171.4 196 45.9
Dinv14824 Davidia involucrata HOM05D004097 ORTHO05D005352 1.0e-40 170.6 149 55.7
Hma1.2p1_0668F.1_g200000 Hydrangea macrophylla HOM05D004097 ORTHO05D005352 9.7e-39 164.1 155 51.0
ATR0561G059 Amborella trichopoda HOM05D004097 ORTHO05D005352 2.8e-38 162.5 199 44.7
QL03p053766 Quercus lobata HOM05D004097 ORTHO05D005352 3.7e-38 162.2 155 51.6
MD13G1116700 Malus domestica HOM05D004097 ORTHO05D005352 1.4e-37 160.2 155 49.0
Haze_12390 Corylus avellana HOM05D004097 ORTHO05D005352 4.1e-37 158.7 155 51.0
Prupe.1G228800 Prunus persica HOM05D004097 ORTHO05D005352 4.1e-37 158.7 155 49.0
Actinidia20697 Actinidia chinensis HOM05D004097 ORTHO05D005352 7.0e-37 157.9 198 41.4
MD16G1117400 Malus domestica HOM05D004097 ORTHO05D005352 9.1e-37 157.5 155 48.4
EL10Ac6g13480 Beta vulgaris HOM05D004097 ORTHO05D005352 1.2e-36 157.1 155 51.6
Cfa009333 Carpinus fangiana HOM05D004097 ORTHO05D005352 2.7e-36 156.0 152 51.3
Migut.K00711 Erythranthe guttata HOM05D004097 ORTHO05D005352 2.7e-36 156.0 191 41.9
Sc04g0010030 Simmondsia chinensis HOM05D004097 ORTHO05D005352 7.7e-36 154.5 198 42.9
CSS0033535 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 2.2e-35 152.9 197 40.1
RcHm_v2.0_Chr4g0430631 Rosa chinensis HOM05D004097 ORTHO05D005352 2.9e-35 152.5 154 49.4
Medtr8g080290 Medicago truncatula HOM05D004097 ORTHO05D005352 5.0e-35 151.8 155 47.7
CSS0021321 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 6.5e-35 151.4 197 39.6
Glyma.05G146500 Glycine max HOM05D004097 ORTHO05D005352 6.5e-35 151.4 198 41.4
PGR102G2071 Punica granatum HOM05D004097 ORTHO05D005352 6.5e-35 151.4 154 47.4
Manes.13G018100 Manihot esculenta HOM05D004097 ORTHO05D005352 8.5e-35 151.0 198 41.4
FvH4_4g23960 Fragaria vesca HOM05D004097 ORTHO05D005352 1.1e-34 150.6 193 42.0
FAN12G2099 Fragaria x ananassa HOM05D004097 ORTHO05D005352 1.1e-34 150.6 193 42.0
Oeu019032.1 Olea europaea HOM05D004097 ORTHO05D005352 1.1e-34 150.6 191 41.4
Ciclev10030695m.g Citrus clementina HOM05D004097 ORTHO05D005352 1.5e-34 150.2 198 40.9
TWI18G1202 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 1.5e-34 150.2 155 47.7
HPP92_023192 Vanilla planifolia HOM05D004097 ORTHO05D005352 1.5e-34 150.2 199 41.7
AUR62005598 Chenopodium quinoa HOM05D004097 ORTHO05D005352 1.9e-34 149.8 155 46.5
AUR62024129 Chenopodium quinoa HOM05D004097 ORTHO05D005352 2.5e-34 149.4 155 45.8
Lj6C825T6 Lonicera japonica HOM05D004097 ORTHO05D005352 2.5e-34 149.4 211 40.8
SGA_v2.0_scaffold130G34253 Striga asiatica HOM05D004097 ORTHO05D005352 3.2e-34 149.1 192 40.1
TWI36G0618 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 3.2e-34 149.1 155 48.4
Glyma.08G103167 Glycine max HOM05D004097 ORTHO05D005352 4.2e-34 148.7 198 41.4
Psat7g078280 Pisum sativum HOM05D004097 ORTHO05D005352 4.2e-34 148.7 198 40.4
Ca_18044_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 5.5e-34 148.3 198 40.4
Rhsim12G0102000 Rhododendron simsii HOM05D004097 ORTHO05D005352 7.2e-34 147.9 199 40.2
TPR.G17069 Trifolium pratense HOM05D004097 ORTHO05D005352 7.2e-34 147.9 193 41.5
CsaV3_5G030370 Cucumis sativus L. HOM05D004097 ORTHO05D005352 9.4e-34 147.5 155 45.8
Potri.010G059000 Populus trichocarpa HOM05D004097 ORTHO05D005352 9.4e-34 147.5 198 40.4
TPR.G17087 Trifolium pratense HOM05D004097 ORTHO05D005352 1.2e-33 147.1 193 42.0
Thecc.02G212500 Theobroma cacao HOM05D004097 ORTHO05D005352 1.6e-33 146.7 197 41.1
Atru.chr11.2303 Acer truncatum HOM05D004097 ORTHO05D005352 2.7e-33 146.0 155 49.0
CANSAT01G0794 Cannabis sativa HOM05D004097 ORTHO05D005352 2.7e-33 146.0 156 46.8
DCAR_031191 Daucus carota HOM05D004097 ORTHO05D005352 2.7e-33 146.0 191 39.8
Lj4g0020055 Lotus japonicus HOM05D004097 ORTHO05D005352 2.7e-33 146.0 198 41.4
Medtr8g080360 Medicago truncatula HOM05D004097 ORTHO05D005352 2.7e-33 146.0 193 42.5
Phvul.002G174800 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 2.7e-33 146.0 198 39.9
Duzib251G0245 Durio zibethinus HOM05D004097 ORTHO05D005352 3.6e-33 145.6 196 41.3
FAN07G0057 Fragaria x ananassa HOM05D004097 ORTHO05D005352 3.6e-33 145.6 193 40.4
Peaxi162Scf00128g01140 Petunia axillaris HOM05D004097 ORTHO05D005352 3.6e-33 145.6 198 41.4
Eucgr.B03480 Eucalyptus grandis HOM05D004097 ORTHO05D005352 6.1e-33 144.8 155 45.8
MSTRG.7991 Avicennia marina HOM05D004097 ORTHO05D005352 1.0e-32 144.1 191 40.8
CDE05G0715 Ceratophyllum demersum HOM05D004097 ORTHO05D005352 1.0e-32 144.1 154 45.5
Ca_18045_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 1.8e-32 143.3 197 39.6
Hund25455 Selenicereus undatus HOM05D004097 ORTHO05D005352 1.8e-32 143.3 193 39.4
arahy.Tifrunner.gnm1.ann1.11CB4V Arachis hypogaea HOM05D004097 ORTHO05D005352 2.3e-32 142.9 198 39.4
ClCG11G013780 Citrullus lanatus HOM05D004097 ORTHO05D005352 4.0e-32 142.1 155 43.9
MELO3C011876.2 Cucumis melo HOM05D004097 ORTHO05D005352 4.0e-32 142.1 155 43.9
Sabra10G0046600 Salix brachista HOM05D004097 ORTHO05D005352 5.2e-32 141.7 198 39.4
Cpa.g.sc1279.1 Carica papaya HOM05D004097 ORTHO05D005352 6.8e-32 141.4 154 46.8
Psat7g078160 Pisum sativum HOM05D004097 ORTHO05D005352 6.8e-32 141.4 198 39.9
CiPaw.05G112000 Carya illinoinensis HOM05D004097 ORTHO05D005352 8.8e-32 141.0 148 46.6
COL.COLO4_20377 Corchorus olitorius HOM05D004097 ORTHO05D005352 8.8e-32 141.0 196 40.3
Glyma.05G146400 Glycine max HOM05D004097 ORTHO05D005352 1.2e-31 140.6 198 38.9
Lalb_Chr13g0294231 Lupinus albus HOM05D004097 ORTHO05D005352 1.2e-31 140.6 193 37.8
VMungo0251G3132 Vigna mungo HOM05D004097 ORTHO05D005352 1.5e-31 140.2 155 47.1
HanXRQChr17g0540261 Helianthus annuus HOM05D004097 ORTHO05D005352 2.0e-31 139.8 154 42.2
Ah.02g130710 Amaranthus hybridus HOM05D004097 ORTHO05D005352 2.6e-31 139.4 188 41.0
ECA246G4064 Erigeron canadensis HOM05D004097 ORTHO05D005352 3.4e-31 139.0 191 38.2
Duzib248G1376 Durio zibethinus HOM05D004097 ORTHO05D005352 4.4e-31 138.7 196 39.8
Lsat_1_v5_gn_3_29780 Lactuca sativa HOM05D004097 ORTHO05D005352 4.4e-31 138.7 155 43.2
Prupe.1G228900 Prunus persica HOM05D004097 ORTHO05D005352 4.4e-31 138.7 149 46.3
Lalb_Chr13g0294221 Lupinus albus HOM05D004097 ORTHO05D005352 5.7e-31 138.3 197 39.1
FAN17G1448 Fragaria x ananassa HOM05D004097 ORTHO05D005352 9.8e-31 137.5 162 43.8
Sed0007371 Sechium edule HOM05D004097 ORTHO05D005352 1.3e-30 137.1 145 46.9
VMungo0251G0768 Vigna mungo HOM05D004097 ORTHO05D005352 1.3e-30 137.1 198 38.4
Gohir.D01G154900 Gossypium hirsutum HOM05D004097 ORTHO05D005352 2.8e-30 136.0 191 39.8
Gorai.002G191800 Gossypium raimondii HOM05D004097 ORTHO05D005352 3.7e-30 135.6 191 39.8
SalBow2G2696 Salvia bowleyana HOM05D004097 ORTHO05D005352 1.1e-29 134.0 154 42.2
Solyc05g015220.3 Solanum lycopersicum HOM05D004097 ORTHO05D005352 1.1e-29 134.0 154 45.5
arahy.Tifrunner.gnm1.ann1.7LT28F Arachis hypogaea HOM05D004097 ORTHO05D005352 1.4e-29 133.7 198 38.4
Sopen05g010470 Solanum pennellii HOM05D004097 ORTHO05D005352 1.4e-29 133.7 154 45.5
Gohir.A01G155000 Gossypium hirsutum HOM05D004097 ORTHO05D005352 2.4e-29 132.9 191 39.3
CAN.G1548.3 Capsicum annuum HOM05D004097 ORTHO05D005352 4.1e-29 132.1 198 38.4
CAN.G311.73 Capsicum annuum HOM05D004097 ORTHO05D005352 4.1e-29 132.1 198 38.4
DCAR_026468 Daucus carota HOM05D004097 ORTHO05D005352 2.0e-28 129.8 169 42.0
SEGI_39835 Sequoiadendron giganteum HOM05D004097 ORTHO05D005352 2.7e-28 129.4 197 36.5
Nitab4.5_0002174g0020 Nicotiana tabacum HOM05D004097 ORTHO05D005352 4.5e-28 128.6 197 38.6
Thhalv10018104m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 1.0e-27 127.5 191 37.7
AT1G67490 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 1.3e-27 127.1 196 37.2
BraA07t30877Z Brassica rapa HOM05D004097 ORTHO05D005352 1.3e-27 127.1 155 43.2
AL2G26080 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 1.7e-27 126.7 186 38.7
Cc00_g13540 Coffea canephora HOM05D004097 ORTHO05D005352 2.3e-27 126.3 155 44.5
MD16G1117300 Malus domestica HOM05D004097 ORTHO05D005352 2.3e-27 126.3 145 42.1
A07p32530 Brassica napus HOM05D004097 ORTHO05D005352 3.8e-27 125.6 155 42.6
THA.LOC104807884 Tarenaya hassleriana HOM05D004097 ORTHO05D005352 5.0e-27 125.2 191 35.6
BolC6t38956H Brassica oleracea HOM05D004097 ORTHO05D005352 6.5e-27 124.8 155 41.9
SHI17952 Sapria himalayana HOM05D004097 ORTHO05D005352 1.9e-26 123.2 213 36.2
C06p38670 Brassica napus HOM05D004097 ORTHO05D005352 3.3e-26 122.5 155 41.9
Carub.0002s1382 Capsella rubella HOM05D004097 ORTHO05D005352 4.2e-26 122.1 191 36.6
Haze_12355 Corylus avellana HOM05D004097 ORTHO05D005352 5.5e-26 121.7 155 45.2
Aa31sc781G10 Aethionema arabicum HOM05D004097 ORTHO05D005352 7.2e-26 121.3 199 37.2
Sp5g22470 Schrenkiella parvula HOM05D004097 ORTHO05D005352 7.2e-26 121.3 155 41.9
Zm00001eb143210 Zea mays HOM05D004097 ORTHO05D005352 1.2e-25 120.6 195 35.4
unitig_22.g6409 Utricularia gibba HOM05D004097 ORTHO05D005352 6.1e-25 118.2 176 35.2
AT1G24320 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 1.3e-22 110.5 155 39.4
Os01g0921200 Oryza sativa ssp. japonica HOM05D004097 ORTHO05D005352 1.7e-22 110.2 197 31.5
Sp1g23450 Schrenkiella parvula HOM05D004097 ORTHO05D005352 1.7e-22 110.2 191 33.5
Oeu036882.3 Olea europaea HOM05D004097 ORTHO05D005352 2.8e-22 109.4 165 41.8
BcaB03g13996 Brassica carinata HOM05D004097 ORTHO05D005352 8.3e-22 107.8 191 35.1
C07p17980 Brassica napus HOM05D004097 ORTHO05D005352 1.4e-21 107.1 191 33.5
Thhalv10006835m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 4.1e-21 105.5 191 31.9
FAN22G1343 Fragaria x ananassa HOM05D004097 ORTHO05D005352 4.1e-21 105.5 124 45.2
Carub.0001s2575 Capsella rubella HOM05D004097 ORTHO05D005352 1.2e-20 104.0 155 36.8
Aa31LG7G6710 Aethionema arabicum HOM05D004097 ORTHO05D005352 2.7e-20 102.8 186 34.4
CARHR026770 Cardamine hirsuta HOM05D004097 ORTHO05D005352 4.5e-20 102.1 189 31.7
A07p12040 Brassica napus HOM05D004097 ORTHO05D005352 7.8e-20 101.3 191 33.0
BcaC06g35272 Brassica carinata HOM05D004097 ORTHO05D005352 1.3e-19 100.5 155 36.1
BcaB03g15361 Brassica carinata HOM05D004097 ORTHO05D005352 8.6e-19 97.8 152 38.2
BolC7t42308H Brassica oleracea HOM05D004097 ORTHO05D005352 8.6e-19 97.8 167 35.3
BcaB03g13994 Brassica carinata HOM05D004097 ORTHO05D005352 1.2e-17 94.0 198 31.8
Mapoly0071s0095 Marchantia polymorpha HOM05D004097 ORTHO05D005352 1.2e-17 94.0 129 34.9
AL1G40600 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 2.3e-16 89.7 157 34.4
Pp3c11_13660 Physcomitrium patens HOM05D004097 ORTHO05D005352 2.3e-16 89.7 131 35.1
Sp1g06290 Schrenkiella parvula HOM05D004097 ORTHO05D005352 4.0e-16 89.0 151 36.4
AagrBONN_evm.TU.Sc2ySwM_344.2645 Anthoceros agrestis HOM05D004097 ORTHO05D005352 3.7e-14 82.4 138 34.8
C05p05580 Brassica napus HOM05D004097 ORTHO05D005352 6.4e-14 81.6 150 36.7
Nitab4.5_0005179g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 1.4e-13 80.5 88 46.6
BolC5t29329H Brassica oleracea HOM05D004097 ORTHO05D005352 4.1e-13 79.0 152 34.9
CBR_g11887 Chara braunii HOM05D004097 ORTHO05D005352 1.0e-11 74.3 133 33.1
BcaB02g06725 Brassica carinata HOM05D004097 ORTHO05D005352 1.7e-11 73.6 170 30.0
SMO358G0259 Selaginella moellendorffii HOM05D004097 ORTHO05D005352 3.9e-11 72.4 133 28.6
Ca_18056_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 4.3e-10 68.9 99 35.4
Phvul.002G174901 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 3.6e-09 65.9 154 27.9
BcaB07g33265 Brassica carinata HOM05D004070 ORTHO05D032257 2.2e-06 56.6 47 51.1
BcaB07g33267 Brassica carinata HOM05D004070 ORTHO05D032257 2.2e-06 56.6 47 51.1


User provided reference genes

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