Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0429 Papaver somniferum HOM05D003018 ORTHO05D003402 1.0e-99 366.7 183 100.0
PSO729G0279 Papaver somniferum HOM05D003018 ORTHO05D003402 1.8e-96 355.9 182 96.7
PSO782G4498 Papaver somniferum HOM05D003018 ORTHO05D003402 9.5e-61 237.3 182 67.6
PSO339G1784 Papaver somniferum HOM05D003018 ORTHO05D003402 3.9e-54 215.3 180 61.1
PSO017G0083 Papaver somniferum HOM05D003018 ORTHO05D003402 1.4e-48 196.8 100 98.0
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 2.9e-33 146.0 185 47.0
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 2.9e-33 146.0 185 47.0
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 6.4e-33 144.8 197 42.6
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 2.4e-32 142.9 190 44.7
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 3.2e-32 142.5 187 43.9
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 4.2e-32 142.1 188 42.6
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 7.1e-32 141.4 197 41.6
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 7.1e-32 141.4 197 41.6
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.6e-31 140.2 186 44.1
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.6e-31 140.2 186 41.9
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.6e-31 140.2 186 44.1
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.1e-31 139.8 186 43.5
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 2.7e-31 139.4 187 43.3
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 2.7e-31 139.4 197 41.1
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 4.6e-31 138.7 187 43.3
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 6.0e-31 138.3 186 43.5
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 6.0e-31 138.3 190 42.1
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 6.0e-31 138.3 196 39.8
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 6.0e-31 138.3 187 42.8
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 1.0e-30 137.5 187 42.8
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 1.0e-30 137.5 186 42.5
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 1.0e-30 137.5 187 42.2
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 1.0e-30 137.5 187 43.9
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 1.3e-30 137.1 188 42.0
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 1.3e-30 137.1 198 40.9
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.3e-30 136.3 186 40.9
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 2.3e-30 136.3 174 43.7
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 2.3e-30 136.3 185 42.7
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 3.0e-30 136.0 189 42.9
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 3.0e-30 136.0 197 40.6
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 3.9e-30 135.6 174 43.7
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 3.9e-30 135.6 187 43.3
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 8.7e-30 134.4 189 42.9
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 1.1e-29 134.0 187 41.7
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 1.1e-29 134.0 187 42.2
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 1.5e-29 133.7 185 42.7
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 1.9e-29 133.3 187 41.2
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 1.9e-29 133.3 187 42.8
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 1.9e-29 133.3 187 40.6
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 1.9e-29 133.3 187 40.6
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 1.9e-29 133.3 187 40.6
CsaV3_5G000150 Cucumis sativus L. HOM05D003018 ORTHO05D003402 2.5e-29 132.9 185 40.0
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 3.3e-29 132.5 188 40.4
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 3.3e-29 132.5 197 40.1
MELO3C005915.2 Cucumis melo HOM05D003018 ORTHO05D003402 3.3e-29 132.5 185 40.0
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 3.3e-29 132.5 198 39.4
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 4.3e-29 132.1 185 42.7
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 4.3e-29 132.1 185 40.5
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 5.6e-29 131.7 187 42.2
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 5.6e-29 131.7 187 42.2
Lj1g0024936 Lotus japonicus HOM05D003018 ORTHO05D003402 9.6e-29 131.0 187 41.7
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 1.3e-28 130.6 187 40.6
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 1.3e-28 130.6 197 37.6
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 1.6e-28 130.2 198 40.9
Gohir.A11G017100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.6e-28 130.2 186 41.9
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 1.6e-28 130.2 188 40.4
Duzib084G0455 Durio zibethinus HOM05D003018 ORTHO05D003402 2.1e-28 129.8 197 39.1
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 2.1e-28 129.8 187 41.7
Sabra15G0000400 Salix brachista HOM05D003018 ORTHO05D003402 2.1e-28 129.8 189 41.8
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 2.8e-28 129.4 187 40.6
Sed0009908 Sechium edule HOM05D003018 ORTHO05D003402 6.2e-28 128.3 185 38.4
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 6.2e-28 128.3 193 40.4
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.1e-27 127.5 196 39.3
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 1.4e-27 127.1 201 38.8
AT5G24650 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 1.8e-27 126.7 179 41.9
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.4e-27 126.3 186 41.4
AL6G36250 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 3.1e-27 125.9 179 41.9
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 3.1e-27 125.9 188 38.3
Carub.0006s2250 Capsella rubella HOM05D003018 ORTHO05D003402 4.0e-27 125.6 179 41.9
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 4.0e-27 125.6 187 39.6
PSO170G6331 Papaver somniferum HOM05D003018 ORTHO05D003402 4.0e-27 125.6 76 84.2
PSO210G3039 Papaver somniferum HOM05D003018 ORTHO05D003402 4.0e-27 125.6 76 84.2
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 4.0e-27 125.6 188 39.4
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 9.0e-27 124.4 186 38.7
Sp2g22740 Schrenkiella parvula HOM05D003018 ORTHO05D003402 9.0e-27 124.4 179 41.3
BcaNung01249 Brassica carinata HOM05D003018 ORTHO05D003402 1.2e-26 124.0 174 40.2
ECA232G4756 Erigeron canadensis HOM05D003018 ORTHO05D003402 1.5e-26 123.6 182 40.7
Gohir.A09G187100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.5e-26 123.6 163 44.8
SalBow4G0431 Salvia bowleyana HOM05D003018 ORTHO05D003402 2.6e-26 122.9 182 41.2
THA.LOC104798993 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 2.6e-26 122.9 188 38.8
BcaNung02005 Brassica carinata HOM05D003018 ORTHO05D003402 3.4e-26 122.5 179 39.7
C07p43070 Brassica napus HOM05D003018 ORTHO05D003402 3.4e-26 122.5 179 39.7
BolC7t44834H Brassica oleracea HOM05D003018 ORTHO05D003402 3.4e-26 122.5 179 39.7
Thhalv10004788m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 4.5e-26 122.1 179 40.8
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 7.6e-26 121.3 198 34.3
A06p35470 Brassica napus HOM05D003018 ORTHO05D003402 7.6e-26 121.3 179 39.7
BraA06t26470Z Brassica rapa HOM05D003018 ORTHO05D003402 7.6e-26 121.3 179 39.7
Lsat_1_v5_gn_2_135421 Lactuca sativa HOM05D003018 ORTHO05D003402 7.6e-26 121.3 190 38.9
CARHR188810 Cardamine hirsuta HOM05D003018 ORTHO05D003402 9.9e-26 120.9 190 37.4
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 1.3e-25 120.6 187 38.0
CDE02G1646 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.2e-25 119.8 170 39.4
Sp5g12550 Schrenkiella parvula HOM05D003018 ORTHO05D003402 2.9e-25 119.4 177 39.0
CARHR158570 Cardamine hirsuta HOM05D003018 ORTHO05D003402 4.9e-25 118.6 179 39.1
Aa31LG11G3900 Aethionema arabicum HOM05D003018 ORTHO05D003402 6.4e-25 118.2 179 39.7
Sed0018717 Sechium edule HOM05D003018 ORTHO05D003402 8.4e-25 117.9 187 37.4
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 1.1e-24 117.5 187 38.5
THA.LOC104814958 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 1.4e-24 117.1 188 36.2
BcaB01g00697 Brassica carinata HOM05D003018 ORTHO05D003402 1.9e-24 116.7 177 39.0
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 3.2e-24 115.9 180 38.9
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 3.2e-24 115.9 180 38.9
FvH4_7g33330 Fragaria vesca HOM05D003018 ORTHO05D003402 3.2e-24 115.9 187 36.9
PSO832G1145 Papaver somniferum HOM05D003018 ORTHO05D003402 3.2e-24 115.9 100 63.0
TPR.G35918 Trifolium pratense HOM05D003018 ORTHO05D003402 4.2e-24 115.5 187 38.0
AL5G29400 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 7.1e-24 114.8 179 39.1
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 9.3e-24 114.4 190 37.9
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 1.6e-23 113.6 198 36.4
FAN03G3459 Fragaria x ananassa HOM05D003018 ORTHO05D003402 3.5e-23 112.5 188 35.6
C08p24540 Brassica napus HOM05D003018 ORTHO05D003402 6.0e-23 111.7 183 37.2
BolC8t50072H Brassica oleracea HOM05D003018 ORTHO05D003402 6.0e-23 111.7 183 37.2
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 6.0e-23 111.7 198 35.9
Thhalv10010930m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 7.9e-23 111.3 182 36.8
FAN01G2324 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.3e-22 110.5 188 35.1
FAN10G1538 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.3e-22 110.5 188 35.1
FAN10G3922 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.3e-22 110.5 188 35.1
BraA06t24904Z Brassica rapa HOM05D003018 ORTHO05D003402 1.8e-22 110.2 183 37.2
Carub.0005s1589 Capsella rubella HOM05D003018 ORTHO05D003402 1.8e-22 110.2 179 38.0
PSO832G4292 Papaver somniferum HOM05D003018 ORTHO05D003402 1.8e-22 110.2 102 56.9
A06p18200 Brassica napus HOM05D003018 ORTHO05D003402 2.3e-22 109.8 183 37.2
AT3G49560 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 3.0e-22 109.4 179 37.4
BcaC07g39417 Brassica carinata HOM05D003018 ORTHO05D003402 3.0e-22 109.4 177 37.3
Lsat_1_v5_gn_2_3400 Lactuca sativa HOM05D003018 ORTHO05D003402 5.1e-22 108.6 181 37.6
AUR62028118 Chenopodium quinoa HOM05D003018 ORTHO05D003402 1.5e-21 107.1 188 34.6
Aa31LG4G18050 Aethionema arabicum HOM05D003018 ORTHO05D003402 1.9e-21 106.7 179 36.3
AUR62005947 Chenopodium quinoa HOM05D003018 ORTHO05D003402 2.5e-21 106.3 188 34.6
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 3.3e-21 105.9 189 34.9
Lsat_1_v5_gn_8_4220 Lactuca sativa HOM05D003018 ORTHO05D003402 7.4e-21 104.8 154 39.6
Zm00001eb084410 Zea mays HOM05D003018 ORTHO05D003402 9.6e-21 104.4 187 35.3
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 1.6e-20 103.6 188 34.6
DCAR_010557 Daucus carota HOM05D003018 ORTHO05D003402 3.7e-20 102.4 111 50.5
PSO541G2887 Papaver somniferum HOM05D003018 ORTHO05D003402 1.8e-19 100.1 102 52.0
GSVIVG01038683001 Vitis vinifera HOM05D003018 ORTHO05D003402 1.8e-19 100.1 110 48.2
Zm00001eb181270 Zea mays HOM05D003018 ORTHO05D003402 1.8e-19 100.1 198 32.3
CiPaw.05G208700 Carya illinoinensis HOM05D003018 ORTHO05D003402 3.1e-19 99.4 197 32.0
Mapoly0083s0018 Marchantia polymorpha HOM05D003018 ORTHO05D003402 4.0e-19 99.0 186 34.9
Os04g0405100 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 5.3e-19 98.6 187 35.8
COL.COLO4_14400 Corchorus olitorius HOM05D003018 ORTHO05D003402 6.9e-19 98.2 193 34.2
Haze_00335 Corylus avellana HOM05D003018 ORTHO05D003402 6.9e-19 98.2 198 34.8
Gorai.007G017700 Gossypium raimondii HOM05D003018 ORTHO05D003402 9.0e-19 97.8 160 38.1
ClCG01G000020 Citrullus lanatus HOM05D003018 ORTHO05D003402 2.6e-18 96.3 185 34.1
SMO356G0102 Selaginella moellendorffii HOM05D003018 ORTHO05D003402 2.6e-18 96.3 183 32.8
Zm00001eb242440 Zea mays HOM05D003018 ORTHO05D003402 2.6e-18 96.3 109 46.8
Cc02_g00590 Coffea canephora HOM05D003018 ORTHO05D003402 1.0e-17 94.4 110 46.4
Psat5g071120 Pisum sativum HOM05D003018 ORTHO05D003402 1.7e-17 93.6 144 40.3
ECA248G1111 Erigeron canadensis HOM05D001208 ORTHO05D001593 2.2e-17 93.2 195 33.8
ECA248G0015 Erigeron canadensis HOM05D003018 ORTHO05D003402 2.9e-17 92.8 158 36.7
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 2.9e-17 92.8 180 34.4
unitig_62.g23859 Utricularia gibba HOM05D003018 ORTHO05D003402 6.5e-17 91.7 94 51.1
unitig_64.g29776 Utricularia gibba HOM05D000525 ORTHO05D001368 6.5e-17 91.7 94 51.1
Gohir.D09G181900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.4e-16 90.5 116 41.4
Sc19g0000360 Simmondsia chinensis HOM05D003018 ORTHO05D003402 1.4e-16 90.5 110 44.5
Lalb_Chr08g0239411 Lupinus albus HOM05D003018 ORTHO05D003402 2.5e-16 89.7 117 44.4
EL10Ac3g05130 Beta vulgaris HOM05D003018 ORTHO05D003402 3.2e-16 89.4 189 32.3
unitig_52.g16865 Utricularia gibba HOM05D003018 ORTHO05D003402 2.7e-15 86.3 176 34.7
ECA248G2250 Erigeron canadensis HOM05D003018 ORTHO05D003402 4.6e-15 85.5 196 33.2
PSO339G6351 Papaver somniferum HOM05D003018 ORTHO05D003402 6.0e-15 85.1 183 35.5
HanXRQChr15g0497021 Helianthus annuus HOM05D003018 ORTHO05D003402 7.9e-15 84.7 129 35.7
AagrBONN_evm.TU.Sc2ySwM_344.126 Anthoceros agrestis HOM05D003018 ORTHO05D003402 1.5e-13 80.5 157 33.1
Cpa.g.sc3.187 Carica papaya HOM05D003018 ORTHO05D003402 3.3e-13 79.3 121 38.0
PSO339G5543 Papaver somniferum HOM05D003018 ORTHO05D003402 9.7e-13 77.8 161 32.9
PSO675G3559 Papaver somniferum HOM05D003018 ORTHO05D003402 9.7e-13 77.8 177 33.3
Psat1g196200 Pisum sativum HOM05D003018 ORTHO05D003402 2.8e-12 76.3 134 32.8
Psat6g092160 Pisum sativum HOM05D003018 ORTHO05D003402 2.8e-12 76.3 134 32.8
Os02g0526500 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 9.0e-11 71.2 118 35.6
SEGI_14341 Sequoiadendron giganteum HOM05D003018 ORTHO05D003402 5.9e-10 68.6 84 46.4
HanXRQChr11g0346471 Helianthus annuus HOM05D003018 ORTHO05D003402 2.2e-09 66.6 156 33.3
PSO675G9013 Papaver somniferum HOM05D003018 ORTHO05D003402 6.5e-09 65.1 167 30.5
CSS0003954 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 1.4e-08 63.9 117 36.8
Cre03.g183100 Chlamydomonas reinhardtii HOM05D003018 ORTHO05D003402 1.4e-08 63.9 175 29.7
ECA232G1833 Erigeron canadensis HOM05D000455 ORTHO05D000434 1.9e-08 63.5 219 26.9
HanXRQChr01g0012351 Helianthus annuus HOM05D003018 ORTHO05D003402 5.5e-08 62.0 149 31.5
PSO339G5652 Papaver somniferum HOM05D003018 ORTHO05D003402 1.6e-07 60.5 153 32.7
BcaC06g31152 Brassica carinata HOM05D003018 ORTHO05D003402 1.0e-06 57.8 157 31.8
C07p34140 Brassica napus HOM05D003018 ORTHO05D003402 1.0e-06 57.8 157 31.8
BolC7t43927H Brassica oleracea HOM05D003018 ORTHO05D003402 1.0e-06 57.8 157 31.8
BolC7t43940H Brassica oleracea HOM05D003018 ORTHO05D003402 1.0e-06 57.8 157 31.8
PSO729G0102 Papaver somniferum HOM05D003018 ORTHO05D003402 1.0e-06 57.8 24 100.0
Eucgr.K00528 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.4e-06 57.4 70 45.7
PSO541G2030 Papaver somniferum HOM05D003018 ORTHO05D304664 2.3e-06 56.6 126 31.7
A06p42880 Brassica napus HOM05D003018 ORTHO05D003402 5.1e-06 55.5 156 30.8
BraA06t27200Z Brassica rapa HOM05D003018 ORTHO05D003402 5.1e-06 55.5 156 30.8
ClCG00G004180 Citrullus lanatus HOM05D003018 ORTHO05D003402 5.1e-06 55.5 70 42.9
MCO01G667 Micromonas commoda HOM05D003018 ORTHO05D003402 5.1e-06 55.5 184 26.1


User provided reference genes

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