Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 1.3e-79 299.7 147 100.0
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 2.1e-71 272.3 138 97.8
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 6.3e-47 191.0 133 75.2
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 1.4e-33 146.7 135 53.3
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 1.8e-33 146.4 137 53.3
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 1.8e-33 146.4 135 52.6
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 3.0e-33 145.6 137 52.6
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 4.0e-33 145.2 135 52.6
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 4.0e-33 145.2 135 53.3
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 6.7e-33 144.4 135 51.9
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 8.8e-33 144.1 135 52.6
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 1.2e-32 143.7 135 54.8
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 1.5e-32 143.3 135 51.9
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 1.5e-32 143.3 135 53.3
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 1.5e-32 143.3 135 51.1
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 2.0e-32 142.9 135 51.1
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 2.0e-32 142.9 135 51.9
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 2.0e-32 142.9 135 49.6
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 2.6e-32 142.5 135 52.6
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 2.6e-32 142.5 135 51.9
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.3e-32 142.1 135 51.9
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.3e-32 142.1 135 51.9
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 3.3e-32 142.1 135 53.3
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 3.3e-32 142.1 137 53.3
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 3.3e-32 142.1 137 54.0
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 4.4e-32 141.7 135 51.9
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 5.7e-32 141.4 135 50.4
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 5.7e-32 141.4 138 53.6
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 7.5e-32 141.0 135 51.9
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 7.5e-32 141.0 135 51.1
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 9.7e-32 140.6 135 50.4
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 9.7e-32 140.6 135 51.1
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 1.3e-31 140.2 135 49.6
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.7e-31 139.8 135 50.4
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.7e-31 139.8 135 50.4
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 1.7e-31 139.8 133 50.4
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.2e-31 139.4 137 51.8
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.2e-31 139.4 135 51.1
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.2e-31 139.4 135 50.4
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 2.2e-31 139.4 137 51.1
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 3.7e-31 138.7 135 49.6
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 3.7e-31 138.7 135 49.6
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 3.7e-31 138.7 137 51.1
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.7e-31 138.7 135 49.6
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 3.7e-31 138.7 135 51.1
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 3.7e-31 138.7 137 51.8
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 3.7e-31 138.7 137 52.6
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 4.8e-31 138.3 137 51.8
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 4.8e-31 138.3 135 50.4
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 8.2e-31 137.5 135 50.4
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 8.2e-31 137.5 135 51.1
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 8.2e-31 137.5 135 49.6
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 8.2e-31 137.5 134 48.5
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 8.2e-31 137.5 137 49.6
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 8.2e-31 137.5 135 49.6
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 8.2e-31 137.5 135 49.6
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 1.1e-30 137.1 137 51.1
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 1.1e-30 137.1 135 50.4
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.1e-30 137.1 135 50.4
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.4e-30 136.7 135 48.9
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.8e-30 136.3 135 48.9
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.8e-30 136.3 137 52.6
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 2.4e-30 136.0 135 48.9
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 2.4e-30 136.0 135 50.4
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 2.4e-30 136.0 135 48.9
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 2.4e-30 136.0 137 52.6
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 3.1e-30 135.6 135 48.1
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 4.1e-30 135.2 135 49.6
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 4.1e-30 135.2 137 49.6
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 5.3e-30 134.8 135 48.1
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 5.3e-30 134.8 135 48.1
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 5.3e-30 134.8 135 49.6
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 5.3e-30 134.8 135 49.6
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 5.3e-30 134.8 135 48.1
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 7.0e-30 134.4 135 48.1
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 7.0e-30 134.4 135 51.9
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 7.0e-30 134.4 137 49.6
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 9.1e-30 134.0 137 49.6
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 9.1e-30 134.0 135 48.1
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.2e-29 133.7 137 48.9
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.0e-29 132.9 135 51.9
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 2.0e-29 132.9 135 48.1
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.7e-29 132.5 139 50.4
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 3.5e-29 132.1 137 48.9
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 4.5e-29 131.7 135 49.6
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 4.5e-29 131.7 135 48.9
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 5.9e-29 131.3 135 49.6
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 5.9e-29 131.3 139 50.4
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 7.7e-29 131.0 135 48.9
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.0e-28 130.6 137 48.2
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.3e-28 130.2 137 49.6
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 1.7e-28 129.8 137 50.4
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 8.5e-28 127.5 148 47.3
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 1.1e-27 127.1 135 48.9
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.5e-27 126.7 144 46.5
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 7.2e-27 124.4 135 46.7
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 4.7e-26 121.7 137 46.7
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.4e-25 120.2 135 45.2
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 1.8e-25 119.8 119 49.6
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.8e-25 119.8 135 46.7
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 2.3e-25 119.4 118 50.8
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 4.0e-25 118.6 121 52.9
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 8.8e-25 117.5 93 59.1
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 1.5e-24 116.7 137 45.3
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 2.6e-24 115.9 120 50.8
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 3.4e-24 115.5 124 50.8
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 9.8e-24 114.0 137 43.8
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.1e-22 110.5 137 44.5
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.4e-22 110.2 135 43.0
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 3.1e-22 109.0 92 54.3
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 3.1e-22 109.0 92 54.3
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 2.0e-21 106.3 77 63.6
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 1.0e-20 104.0 92 55.4
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.0e-20 104.0 135 42.2
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 4.0e-17 92.0 138 37.0
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 8.9e-17 90.9 140 36.4
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 3.4e-16 89.0 96 51.0
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.4e-14 83.6 137 38.0
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.3e-12 77.0 137 36.5
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 8.6e-12 74.3 136 35.3
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.1e-11 73.9 83 43.4
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 2.5e-11 72.8 95 41.1
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 9.5e-11 70.9 83 44.6
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.4e-06 57.0 141 27.7
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 3.2e-06 55.8 53 47.2


User provided reference genes

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