Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 2.3e-82 308.9 166 100.0
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 2.6e-81 305.4 166 98.8
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 3.6e-67 258.5 167 79.6
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 2.0e-65 252.7 168 78.6
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 7.5e-65 250.8 167 76.6
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 7.5e-65 250.8 166 78.3
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 2.2e-64 249.2 168 76.8
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 2.9e-64 248.8 167 75.4
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 6.4e-64 247.7 167 75.4
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.4e-63 245.7 167 75.4
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.1e-63 245.0 168 76.2
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 4.1e-63 245.0 167 73.1
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 5.4e-63 244.6 168 75.6
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 5.4e-63 244.6 168 75.0
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 5.4e-63 244.6 168 75.6
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.4e-63 244.6 168 75.0
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 5.4e-63 244.6 167 76.0
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 7.1e-63 244.2 168 75.0
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 7.1e-63 244.2 168 75.0
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 9.2e-63 243.8 171 76.0
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 9.2e-63 243.8 168 75.0
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.2e-62 243.4 171 76.6
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 1.2e-62 243.4 167 73.7
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.2e-62 243.4 168 74.4
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.2e-62 243.4 167 75.4
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 2.1e-62 242.7 167 74.3
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 2.7e-62 242.3 168 73.8
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 2.7e-62 242.3 169 75.1
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.5e-62 241.9 170 75.9
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 4.6e-62 241.5 167 72.5
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 1.0e-61 240.4 168 73.2
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 1.0e-61 240.4 167 73.1
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 1.3e-61 240.0 169 74.0
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 1.3e-61 240.0 168 73.8
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 2.3e-61 239.2 167 73.7
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 8.6e-61 237.3 167 73.7
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 8.6e-61 237.3 169 72.8
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.1e-60 236.9 169 71.6
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 1.1e-60 236.9 169 71.6
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.5e-60 236.5 168 73.8
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.5e-60 236.5 167 70.7
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.9e-60 236.1 168 75.6
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.9e-60 236.1 170 70.6
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 3.3e-60 235.3 168 73.8
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 3.3e-60 235.3 169 72.2
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 4.3e-60 235.0 167 71.9
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 4.3e-60 235.0 168 74.4
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 5.6e-60 234.6 167 72.5
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 7.3e-60 234.2 167 72.5
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 9.6e-60 233.8 161 74.5
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 9.6e-60 233.8 168 73.2
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 1.2e-59 233.4 167 71.9
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 1.2e-59 233.4 167 73.1
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 1.6e-59 233.0 172 70.9
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 2.1e-59 232.6 168 70.8
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.1e-59 232.6 169 71.6
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 2.8e-59 232.3 166 72.9
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 3.6e-59 231.9 169 72.2
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 4.7e-59 231.5 168 73.8
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.1e-58 230.3 169 71.6
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 3.1e-58 228.8 169 73.4
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 3.1e-58 228.8 166 70.5
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 4.0e-58 228.4 169 71.0
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 5.2e-58 228.0 168 69.0
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 1.2e-57 226.9 170 69.4
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 2.0e-57 226.1 169 69.8
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.0e-57 226.1 170 69.4
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 4.4e-57 224.9 169 69.2
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 5.8e-57 224.6 168 70.8
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 2.9e-56 222.2 167 68.9
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 3.8e-56 221.9 169 68.6
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 4.9e-56 221.5 169 68.0
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 4.9e-56 221.5 166 69.3
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.1e-55 220.3 173 70.5
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 1.1e-55 220.3 169 69.2
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.4e-55 219.2 168 67.9
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 7.1e-55 217.6 168 66.7
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 7.1e-55 217.6 166 66.9
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 7.1e-55 217.6 168 66.1
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 1.2e-54 216.9 166 66.9
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 1.2e-54 216.9 166 66.9
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 1.2e-54 216.9 166 68.1
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.2e-54 216.9 164 70.1
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.2e-54 216.9 171 67.3
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.1e-54 216.1 168 67.9
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 2.1e-54 216.1 168 66.1
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 2.1e-54 216.1 168 66.1
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 2.1e-54 216.1 166 66.3
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 2.1e-54 216.1 168 66.1
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 2.7e-54 215.7 166 66.3
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 65.5
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 65.5
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 3.5e-54 215.3 168 65.5
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 4.6e-54 214.9 169 66.3
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 4.6e-54 214.9 169 65.7
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 4.6e-54 214.9 171 69.0
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 4.6e-54 214.9 171 69.0
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 6.0e-54 214.5 167 66.5
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 6.0e-54 214.5 167 66.5
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 1.7e-53 213.0 167 68.3
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.3e-53 212.6 162 65.4
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 3.9e-53 211.8 167 65.9
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 3.9e-53 211.8 169 65.1
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 3.9e-53 211.8 169 65.1
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 3.9e-53 211.8 169 65.1
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 6.6e-53 211.1 163 65.6
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.1e-52 210.3 168 66.7
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.1e-52 210.3 162 68.5
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 1.1e-52 210.3 169 66.3
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.5e-52 209.9 168 63.7
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 1.5e-52 209.9 168 63.7
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.5e-52 209.9 163 66.3
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.5e-52 209.9 171 67.8
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.9e-52 209.5 156 71.2
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 3.3e-52 208.8 168 62.5
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 3.3e-52 208.8 168 66.7
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 9.6e-52 207.2 172 61.0
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 9.6e-52 207.2 168 66.1
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.3e-51 206.8 163 63.8
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.8e-51 205.7 168 64.3
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.8e-51 205.7 170 63.5
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 3.6e-51 205.3 171 62.0
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 4.8e-51 204.9 168 62.5
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 4.8e-51 204.9 144 72.9
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 6.2e-51 204.5 153 69.3
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 1.1e-50 203.8 171 62.0
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-50 203.4 170 61.8
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-50 203.4 171 62.0
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 1.4e-50 203.4 171 62.0
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 1.4e-50 203.4 171 62.0
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 1.4e-50 203.4 169 66.3
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 3.1e-50 202.2 172 61.0
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 4.0e-50 201.8 170 67.1
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 6.9e-50 201.1 170 65.3
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.2e-49 200.3 172 61.0
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 1.2e-49 200.3 170 67.1
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 4.9e-48 194.9 161 64.6
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.9e-47 193.0 169 62.7
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 5.6e-44 181.4 102 81.4
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 1.3e-43 180.3 100 83.0
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.6e-43 179.9 102 81.4
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 1.4e-42 176.8 167 61.1
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 1.8e-42 176.4 100 81.0
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 6.9e-42 174.5 169 59.8
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.9e-40 169.1 163 60.1
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 5.4e-39 164.9 167 56.9
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 7.1e-39 164.5 118 70.3
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.6e-35 153.3 167 52.7
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 8.1e-35 151.0 174 50.0
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.1e-34 150.6 172 51.7
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 1.8e-34 149.8 215 45.1
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 4.0e-34 148.7 169 52.7
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 3.8e-32 142.1 179 46.9
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 1.8e-29 133.3 142 51.4
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 5.1e-29 131.7 135 52.6
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 2.5e-28 129.4 171 52.0
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 7.4e-28 127.9 70 84.3
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 9.6e-28 127.5 167 47.3
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.1e-27 126.3 70 82.9
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 3.1e-26 122.5 178 49.4
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 2.9e-24 115.9 176 42.6
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-19 100.5 67 71.6
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-18 96.7 81 63.0
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 1.9e-15 86.7 44 88.6
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 5.9e-09 65.1 62 62.9
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 3.8e-08 62.4 69 65.2


User provided reference genes

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