Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 4.2e-201 704.5 369 100.0
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 2.3e-191 672.2 369 94.3
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 1.5e-129 466.8 331 74.0
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 1.6e-128 463.4 315 75.6
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 8.2e-128 461.1 342 71.9
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 4.1e-127 458.8 366 67.5
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 7.7e-126 454.5 361 67.0
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 1.3e-125 453.8 363 66.9
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 1.7e-125 453.4 343 69.1
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 1.1e-124 450.7 365 66.8
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.9e-124 449.9 361 66.8
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 1.2e-123 447.2 370 66.5
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 1.2e-123 447.2 343 67.9
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 1.2e-123 447.2 336 69.9
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 1.6e-123 446.8 344 68.6
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 2.7e-123 446.0 347 67.7
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 2.7e-123 446.0 304 74.3
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 3.6e-123 445.7 326 72.1
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.0e-122 444.1 318 72.0
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 3.0e-122 442.6 316 73.1
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 6.7e-122 441.4 334 71.3
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 1.1e-121 440.7 315 71.7
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 2.0e-121 439.9 302 75.5
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 7.4e-121 438.0 318 70.4
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 1.7e-120 436.8 334 70.4
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 2.2e-120 436.4 365 64.4
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 2.2e-120 436.4 349 67.6
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 3.7e-120 435.6 290 74.1
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 4.1e-119 432.2 297 73.1
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 5.3e-119 431.8 319 69.9
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 2.0e-118 429.9 348 64.9
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 3.4e-118 429.1 300 72.7
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 7.7e-118 427.9 334 67.4
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 7.7e-118 427.9 333 68.8
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 1.7e-117 426.8 288 74.3
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 2.9e-117 426.0 334 66.2
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 3.8e-117 425.6 330 68.2
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 3.8e-117 425.6 369 62.1
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 6.5e-117 424.9 311 71.4
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 6.5e-117 424.9 345 65.5
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 1.1e-116 424.1 297 73.1
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.9e-116 423.3 341 65.1
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 2.5e-116 422.9 339 65.5
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 3.2e-116 422.5 370 62.2
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 4.2e-116 422.2 339 66.4
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 4.2e-116 422.2 309 69.6
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 5.5e-116 421.8 334 67.4
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 5.5e-116 421.8 324 68.8
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 9.4e-116 421.0 340 64.7
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 9.4e-116 421.0 307 71.0
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 1.2e-115 420.6 302 69.5
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 1.2e-115 420.6 302 69.5
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 1.6e-115 420.2 300 70.0
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 2.1e-115 419.9 306 69.9
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 3.6e-115 419.1 336 64.6
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 4.7e-115 418.7 289 73.4
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 1.0e-114 417.5 343 64.1
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 2.3e-114 416.4 300 69.0
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 2.3e-114 416.4 300 70.0
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 2.3e-114 416.4 289 72.7
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 3.0e-114 416.0 339 63.4
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 3.0e-114 416.0 298 69.8
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 5.1e-114 415.2 298 69.5
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 8.8e-114 414.5 301 70.4
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 1.1e-113 414.1 331 64.0
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 1.5e-113 413.7 297 70.4
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 2.0e-113 413.3 299 68.2
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 3.3e-113 412.5 321 67.3
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 3.7e-112 409.1 331 63.7
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.8e-111 406.8 337 64.1
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 1.8e-111 406.8 299 68.2
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 4.5e-110 402.1 372 59.4
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 2.2e-109 399.8 301 70.8
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 5.0e-109 398.7 294 68.4
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 6.5e-109 398.3 324 64.8
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 8.5e-109 397.9 287 69.3
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 5.5e-108 395.2 315 66.7
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 9.4e-108 394.4 350 60.9
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 5.2e-106 388.7 266 73.3
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 6.7e-106 388.3 342 66.4
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 1.1e-105 387.5 265 75.8
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 2.6e-105 386.3 328 65.2
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 3.8e-101 372.5 354 58.8
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 4.0e-98 362.5 262 67.9
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 8.8e-98 361.3 429 52.4
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 3.4e-97 359.4 488 45.5
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 1.2e-94 350.9 295 64.1
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 2.5e-92 343.2 232 73.7
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 2.5e-92 343.2 234 76.5
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 7.2e-92 341.7 489 43.6
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 9.4e-92 341.3 586 39.9
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 3.6e-91 339.3 236 72.0
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 6.8e-90 335.1 278 60.1
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 1.1e-87 327.8 284 57.7
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 1.8e-87 327.0 266 66.9
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.8e-87 327.0 287 60.6
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 1.2e-86 324.3 301 56.5
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.6e-86 323.9 291 56.0
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 6.1e-83 312.0 224 70.5
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 9.2e-79 298.1 236 66.5
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 3.3e-76 289.7 347 51.6
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 1.2e-73 281.2 184 76.6
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 3.3e-60 236.5 191 61.8
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 7.6e-57 225.3 312 41.3
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 2.2e-56 223.8 170 65.9
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 7.8e-54 215.3 142 72.5
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 2.3e-53 213.8 250 51.2
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 8.6e-53 211.8 162 67.9
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 9.9e-49 198.4 193 51.3
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 1.4e-47 194.5 314 42.7
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 1.2e-46 191.4 299 38.1
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 3.5e-46 189.9 202 54.0
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 2.3e-37 160.6 216 44.4
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 7.6e-33 145.6 169 48.5
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 1.2e-30 138.3 101 70.3
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 9.6e-28 128.6 105 58.1
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 3.5e-22 110.2 84 65.5
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 6.0e-22 109.4 92 59.8
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 7.9e-22 109.0 82 65.9
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 1.0e-16 92.0 72 58.3
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.2e-15 87.0 155 33.5
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 4.2e-15 86.7 54 81.5
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 4.2e-15 86.7 82 58.5
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 1.8e-13 81.3 110 49.1
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 3.9e-13 80.1 55 65.5
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.9e-12 77.8 57 68.4
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.5e-12 77.4 57 68.4
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.5e-12 77.4 57 68.4
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.5e-12 77.4 57 68.4
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.5e-12 77.4 57 68.4
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.5e-12 77.4 57 68.4
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 9.7e-12 75.5 57 66.7
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 4.8e-11 73.2 57 66.7


User provided reference genes

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