Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 1.5e-181 639.4 328 100.0
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 7.3e-128 461.1 310 79.4
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 1.7e-124 449.9 305 78.0
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 2.4e-123 446.0 314 76.4
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 2.4e-123 446.0 305 75.7
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 9.2e-123 444.1 305 76.1
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 4.6e-122 441.8 319 73.4
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 7.8e-122 441.0 302 75.8
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.3e-121 439.5 306 72.9
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.1e-120 437.2 305 74.4
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.5e-120 436.8 304 75.7
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 5.6e-120 434.9 315 72.7
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 7.3e-120 434.5 311 74.9
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.2e-119 433.7 312 74.0
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 1.6e-119 433.3 323 72.8
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 2.8e-119 432.6 311 73.0
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 4.7e-119 431.8 312 74.4
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 4.7e-119 431.8 303 77.2
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 8.1e-119 431.0 311 74.6
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.1e-118 430.6 312 73.4
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.4e-118 430.3 311 74.3
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.4e-118 430.3 304 74.0
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 1.8e-118 429.9 276 78.3
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 1.8e-118 429.9 310 74.5
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.8e-118 429.9 309 72.8
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 4.0e-118 428.7 275 76.7
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 5.2e-118 428.3 306 71.9
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 2.6e-117 426.0 303 73.3
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 2.6e-117 426.0 281 79.0
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 2.2e-116 422.9 304 73.7
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 2.2e-116 422.9 305 74.1
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 2.2e-116 422.9 278 78.4
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 2.9e-116 422.5 309 74.1
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.1e-115 420.6 312 72.4
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 1.1e-115 420.6 307 73.3
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.2e-114 417.2 309 71.8
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.1e-114 416.4 267 78.3
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 3.5e-114 415.6 316 69.3
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 1.7e-113 413.3 294 71.8
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.7e-113 413.3 258 79.1
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 3.9e-113 412.1 303 71.9
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 1.1e-112 410.6 309 71.5
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.1e-112 410.6 274 77.7
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.9e-112 409.8 274 77.0
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 2.5e-112 409.5 265 78.1
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 2.5e-112 409.5 258 81.0
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 3.3e-112 409.1 265 77.7
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 3.3e-112 409.1 276 75.7
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 7.3e-112 407.9 320 66.9
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 7.3e-112 407.9 265 78.5
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 7.3e-112 407.9 269 77.0
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 9.5e-112 407.5 272 77.2
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 1.2e-111 407.1 259 79.5
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 2.1e-111 406.4 323 67.5
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 3.6e-111 405.6 272 78.3
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 3.6e-111 405.6 269 77.0
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 3.6e-111 405.6 262 77.5
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 6.2e-111 404.8 307 71.7
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.1e-110 404.1 303 71.0
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.8e-110 403.3 261 78.2
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 2.3e-110 402.9 340 64.7
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.0e-109 399.8 311 69.5
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 2.0e-109 399.8 273 75.5
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 2.6e-109 399.4 319 68.0
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 4.4e-109 398.7 310 70.0
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.2e-108 396.4 242 83.1
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 1.1e-107 394.0 343 62.7
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 1.2e-106 390.6 323 68.7
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 6.0e-106 388.3 256 75.8
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.7e-105 386.7 205 95.6
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.1e-104 384.0 243 78.6
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 5.6e-104 381.7 236 82.2
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 2.4e-102 376.3 289 67.8
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 1.3e-100 370.5 302 68.5
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 1.4e-99 367.1 305 64.9
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.2e-99 365.5 303 65.0
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 4.6e-98 362.1 311 64.3
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 7.8e-98 361.3 309 63.1
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 1.3e-97 360.5 311 64.0
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 2.3e-97 359.8 308 63.3
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 8.7e-97 357.8 311 63.3
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 8.7e-97 357.8 311 63.3
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.1e-96 357.5 309 62.5
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.1e-96 357.5 305 62.6
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.1e-96 357.5 305 62.3
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.1e-96 357.5 305 62.3
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 3.3e-96 355.9 303 63.7
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 4.3e-96 355.5 337 60.8
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.1e-95 353.2 251 69.3
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 2.8e-95 352.8 306 62.4
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 3.6e-95 352.4 309 61.8
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 4.8e-95 352.1 306 62.4
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 4.8e-95 352.1 289 60.6
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 6.2e-95 351.7 316 62.7
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 1.1e-94 350.9 259 73.4
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 3.1e-94 349.4 254 74.4
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 7.6e-93 344.7 255 73.3
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 4.9e-92 342.0 216 80.6
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 3.2e-91 339.3 247 74.9
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 6.6e-89 331.6 220 78.6
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 8.7e-89 331.3 217 77.9
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 1.8e-86 323.6 311 59.5
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 3.1e-86 322.8 242 70.7
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 1.2e-85 320.9 264 62.9
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 7.1e-83 311.6 256 61.3
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.5e-80 303.1 247 61.1
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 4.0e-78 295.8 224 70.1
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 3.8e-76 289.3 303 53.1
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 1.0e-73 281.2 237 65.0
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.1e-73 278.9 312 56.7
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 9.0e-70 268.1 245 56.7
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.8e-65 253.8 244 56.1
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 2.0e-56 223.8 132 86.4
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 7.7e-53 211.8 315 41.9
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 2.0e-45 187.2 116 72.4
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 8.5e-44 181.8 95 93.7
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 2.8e-39 166.8 112 72.3
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 5.3e-38 162.5 122 61.5
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.0e-33 148.3 91 79.1
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 8.5e-28 128.6 86 72.1
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 5.5e-27 125.9 128 53.9
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 4.6e-13 79.7 64 60.9
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 8.0e-10 68.9 45 73.3
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 2.3e-09 67.4 44 68.2
Nn7g37440 Nelumbo nucifera HOM05D006330 ORTHO05D008013 1.1e-06 58.5 38 73.7


User provided reference genes

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