Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 7.1e-56 220.3 108 100.0
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 9.6e-45 183.3 95 93.7
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 3.5e-39 164.9 95 81.1
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 3.5e-39 164.9 95 81.1
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 7.9e-39 163.7 95 81.1
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 7.9e-39 163.7 95 80.0
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.0e-38 163.3 95 80.0
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.3e-38 162.9 95 80.0
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 2.3e-38 162.2 95 78.9
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.3e-38 162.2 95 80.0
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 3.9e-38 161.4 95 77.9
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 3.9e-38 161.4 95 77.9
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 3.9e-38 161.4 95 78.9
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 5.1e-38 161.0 96 77.1
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 5.1e-38 161.0 95 78.9
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 5.1e-38 161.0 104 75.0
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 6.7e-38 160.6 95 81.1
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 8.7e-38 160.2 95 81.1
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 1.1e-37 159.8 95 78.9
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.5e-37 159.5 95 78.9
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.5e-37 159.5 95 78.9
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 1.5e-37 159.5 95 78.9
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.9e-37 159.1 95 76.8
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.9e-37 159.1 95 75.8
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 1.9e-37 159.1 95 77.9
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 1.9e-37 159.1 95 75.8
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 2.5e-37 158.7 95 80.0
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 2.5e-37 158.7 95 80.0
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 3.3e-37 158.3 95 77.9
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 3.3e-37 158.3 95 76.8
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 3.3e-37 158.3 95 77.9
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 3.3e-37 158.3 95 76.8
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 4.3e-37 157.9 95 76.8
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 4.3e-37 157.9 95 77.9
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 4.3e-37 157.9 95 76.8
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 4.3e-37 157.9 95 78.9
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 4.3e-37 157.9 95 75.8
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 4.3e-37 157.9 95 78.9
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 5.7e-37 157.5 95 78.9
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 5.7e-37 157.5 95 80.0
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 5.7e-37 157.5 95 73.7
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 5.7e-37 157.5 95 77.9
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 7.4e-37 157.1 95 76.8
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 7.4e-37 157.1 95 74.7
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 7.4e-37 157.1 95 73.7
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.3e-36 156.4 95 75.8
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 1.3e-36 156.4 95 75.8
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.3e-36 156.4 95 77.9
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 1.6e-36 156.0 95 75.8
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.6e-36 156.0 95 74.7
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.2e-36 155.6 94 80.9
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.2e-36 155.6 95 73.7
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 2.2e-36 155.6 95 76.8
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 2.2e-36 155.6 95 77.9
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 2.8e-36 155.2 104 72.1
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 4.8e-36 154.5 95 75.8
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 6.3e-36 154.1 95 73.7
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 6.3e-36 154.1 95 74.7
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 8.2e-36 153.7 95 76.8
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 8.2e-36 153.7 95 74.7
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 8.2e-36 153.7 95 73.7
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 1.4e-35 152.9 95 77.9
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.8e-35 152.5 95 74.7
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 2.4e-35 152.1 95 74.7
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 4.1e-35 151.4 95 75.8
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 5.3e-35 151.0 95 73.7
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 6.9e-35 150.6 95 75.8
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 9.0e-35 150.2 104 72.1
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 9.0e-35 150.2 104 72.1
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 1.5e-34 149.4 95 72.6
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 2.6e-34 148.7 95 72.6
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 3.4e-34 148.3 95 73.7
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 4.5e-34 147.9 94 76.6
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 5.9e-34 147.5 95 72.6
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.0e-33 146.7 95 70.5
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 3.8e-33 144.8 95 72.6
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 8.5e-33 143.7 104 63.5
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 2.5e-32 142.1 103 70.9
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 2.5e-32 142.1 108 63.9
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 7.2e-32 140.6 95 68.4
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 1.6e-31 139.4 95 67.4
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 2.1e-31 139.0 95 68.4
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 6.1e-31 137.5 95 68.4
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 1.0e-30 136.7 95 66.3
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.8e-30 136.0 95 65.3
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 1.8e-30 136.0 95 66.3
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 2.3e-30 135.6 95 65.3
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 2.3e-30 135.6 95 65.3
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 2.3e-30 135.6 95 65.3
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 2.3e-30 135.6 95 65.3
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 2.3e-30 135.6 95 65.3
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 8.8e-30 133.7 95 64.2
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 8.8e-30 133.7 95 64.2
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 8.8e-30 133.7 95 64.2
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 8.8e-30 133.7 95 64.2
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 8.8e-30 133.7 95 64.2
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 8.8e-30 133.7 95 64.2
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.1e-29 133.3 95 64.2
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 1.1e-29 133.3 95 64.2
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 6.3e-28 127.5 102 61.8
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 8.2e-28 127.1 78 78.2
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.4e-27 125.6 99 60.6
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 1.5e-26 122.9 99 58.6
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 2.9e-25 118.6 94 64.9
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 5.0e-25 117.9 95 54.7
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 3.6e-23 111.7 68 77.9
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 6.7e-22 107.5 68 76.5
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 2.0e-21 105.9 94 52.1
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 3.3e-21 105.1 67 77.6
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 9.7e-21 103.6 68 75.0
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.8e-19 99.4 106 47.2
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.2e-18 96.7 95 54.7
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.5e-18 96.3 97 47.4
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 4.7e-15 84.7 108 43.5
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 8.0e-15 84.0 69 58.0
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 1.0e-14 83.6 67 61.2
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.5e-13 79.7 58 65.5
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 9.1e-11 70.5 45 75.6
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.6e-07 59.7 33 87.9
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 2.7e-07 58.9 31 83.9
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 6.7e-06 54.3 69 46.4


User provided reference genes

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