Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 1.5e-154 549.7 307 100.0
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 4.9e-142 508.1 309 93.5
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.0e-70 271.2 308 53.2
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 1.8e-67 260.4 252 59.1
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 5.1e-67 258.8 251 57.4
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.9e-66 256.9 253 60.1
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.7e-65 252.7 255 58.0
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 8.2e-65 251.5 245 57.6
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 5.3e-64 248.8 248 56.5
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 2.6e-63 246.5 254 53.1
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 2.9e-62 243.0 258 53.9
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 6.5e-62 241.9 254 57.9
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 6.1e-60 235.3 243 57.6
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 1.0e-59 234.6 254 51.6
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 5.1e-59 232.3 311 48.2
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 1.1e-58 231.1 254 55.5
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 6.3e-57 225.3 222 56.3
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 8.2e-57 224.9 247 52.2
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 8.2e-57 224.9 213 61.5
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 4.1e-56 222.6 228 54.8
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 5.3e-56 222.2 209 59.8
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.5e-55 220.7 235 53.6
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 4.5e-55 219.2 254 52.0
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 4.5e-55 219.2 307 46.6
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 7.7e-55 218.4 256 52.3
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 6.5e-54 215.3 216 55.6
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 8.5e-54 214.9 242 50.4
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 8.5e-54 214.9 229 53.7
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 8.5e-54 214.9 256 52.7
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 1.1e-53 214.5 256 52.0
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 1.4e-53 214.2 213 54.9
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 1.4e-53 214.2 239 54.0
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 1.9e-53 213.8 251 49.0
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 7.2e-53 211.8 250 51.2
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 9.4e-53 211.5 222 55.9
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 1.2e-52 211.1 255 49.4
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 4.7e-52 209.1 256 50.8
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 7.9e-52 208.4 224 52.7
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 7.9e-52 208.4 229 52.4
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 7.9e-52 208.4 263 48.7
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 1.8e-51 207.2 245 52.2
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 2.3e-51 206.8 256 50.8
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 2.3e-51 206.8 259 48.3
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 3.0e-51 206.5 209 57.9
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 3.0e-51 206.5 306 44.1
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 3.9e-51 206.1 312 43.9
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 3.9e-51 206.1 240 51.7
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 3.9e-51 206.1 228 53.5
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 5.2e-51 205.7 229 52.0
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 5.2e-51 205.7 259 47.9
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 6.7e-51 205.3 256 47.7
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 8.8e-51 204.9 256 48.8
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 1.1e-50 204.5 312 43.6
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 2.6e-50 203.4 247 55.1
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 3.3e-50 203.0 261 49.0
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 3.3e-50 203.0 229 53.7
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 5.7e-50 202.2 242 50.0
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 7.4e-50 201.8 225 54.2
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 7.4e-50 201.8 244 49.6
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 1.7e-49 200.7 214 51.9
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 1.7e-49 200.7 213 54.5
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 2.8e-49 199.9 335 41.5
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 2.8e-49 199.9 306 45.4
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 3.7e-49 199.5 236 51.7
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 4.8e-49 199.1 212 54.2
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 6.3e-49 198.7 227 52.4
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 6.3e-49 198.7 268 48.5
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 2.4e-48 196.8 228 51.3
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 2.4e-48 196.8 216 53.7
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 7.0e-48 195.3 213 52.6
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 1.2e-47 194.5 217 51.6
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.6e-47 194.1 224 50.9
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 2.0e-47 193.7 256 46.9
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.9e-47 192.2 312 44.2
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 7.7e-47 191.8 188 55.9
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 7.7e-47 191.8 208 52.4
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 5.0e-46 189.1 213 53.1
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 6.5e-46 188.7 238 49.6
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 6.5e-46 188.7 227 51.5
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 1.1e-45 188.0 204 52.9
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 2.5e-45 186.8 212 53.8
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 7.2e-45 185.3 227 51.1
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 1.6e-44 184.1 287 43.9
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 2.1e-44 183.7 231 48.1
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 2.7e-44 183.3 211 53.1
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 8.0e-44 181.8 224 50.9
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 1.2e-42 177.9 229 48.0
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 1.5e-42 177.6 209 51.7
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.5e-42 177.6 192 55.7
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 2.0e-42 177.2 298 40.6
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 3.3e-42 176.4 196 55.6
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 3.7e-41 172.9 248 44.8
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 7.0e-40 168.7 209 50.2
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 2.0e-39 167.2 209 47.8
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 7.7e-39 165.2 259 41.7
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 8.5e-38 161.8 178 56.7
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 1.1e-37 161.4 196 51.0
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 7.2e-37 158.7 334 35.0
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.9e-30 136.7 258 38.4
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 5.5e-29 132.5 230 38.7
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 1.6e-28 131.0 235 39.1
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 1.7e-25 120.9 173 43.9
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.1e-24 116.7 149 49.7
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 5.6e-21 105.9 216 40.3
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.7e-17 94.4 149 43.6
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 5.4e-16 89.4 62 72.6
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 1.0e-14 85.1 118 48.3
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.6e-13 79.3 122 45.1
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 1.6e-12 77.8 99 46.5
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.8e-12 77.0 68 57.4
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.0e-10 70.9 154 36.4
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.6e-10 70.5 103 40.8
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.7e-09 67.8 94 40.4
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.9e-09 67.0 137 35.8
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 8.3e-09 65.5 62 59.7
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.4e-08 62.8 55 54.5
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.0e-06 56.2 42 66.7


User provided reference genes

Program Settings