Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 2.5e-72 275.4 143 100.0
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 2.5e-72 275.4 143 100.0
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 1.5e-53 213.0 138 77.5
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 5.0e-49 198.0 138 74.6
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 6.5e-49 197.6 143 75.5
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.1e-48 196.8 143 74.8
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 2.5e-48 195.7 143 74.1
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 3.2e-48 195.3 143 74.1
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 5.5e-48 194.5 140 74.3
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 5.5e-48 194.5 140 74.3
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 7.2e-48 194.1 140 75.7
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 2.1e-47 192.6 137 74.5
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 4.7e-47 191.4 143 74.1
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 4.7e-47 191.4 143 74.1
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 4.7e-47 191.4 143 71.3
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 8.0e-47 190.7 143 72.7
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.0e-46 190.3 140 72.1
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 1.8e-46 189.5 136 72.1
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 1.8e-46 189.5 143 72.0
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 5.2e-46 188.0 140 72.9
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 5.2e-46 188.0 140 72.9
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 6.8e-46 187.6 143 70.6
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 8.8e-46 187.2 140 70.7
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 1.2e-45 186.8 143 73.4
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.5e-45 186.4 143 72.0
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.5e-45 186.4 143 72.0
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 1.5e-45 186.4 143 67.8
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 2.0e-45 186.0 143 68.5
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 2.0e-45 186.0 136 74.3
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 2.0e-45 186.0 140 70.0
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 2.6e-45 185.7 143 69.9
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 3.4e-45 185.3 143 71.3
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 3.4e-45 185.3 143 70.6
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 4.4e-45 184.9 140 71.4
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 5.7e-45 184.5 143 72.0
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 5.7e-45 184.5 140 70.7
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 5.7e-45 184.5 140 70.7
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 7.5e-45 184.1 143 68.5
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 7.5e-45 184.1 138 70.3
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 7.5e-45 184.1 138 71.0
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 7.5e-45 184.1 140 70.0
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 7.5e-45 184.1 141 71.6
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 1.3e-44 183.3 143 69.2
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 1.3e-44 183.3 143 68.5
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 2.2e-44 182.6 157 65.6
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.2e-44 182.6 143 67.1
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 2.8e-44 182.2 144 71.5
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 4.8e-44 181.4 143 67.1
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 4.8e-44 181.4 140 69.3
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 8.3e-44 180.6 144 69.4
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 1.1e-43 180.3 141 70.2
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 1.4e-43 179.9 144 67.4
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.4e-43 179.9 143 66.4
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 1.4e-43 179.9 143 66.4
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 1.8e-43 179.5 140 69.3
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 1.8e-43 179.5 140 70.0
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 2.4e-43 179.1 143 68.5
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 3.1e-43 178.7 140 68.6
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 4.1e-43 178.3 140 67.9
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 4.1e-43 178.3 140 67.9
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 4.1e-43 178.3 140 67.9
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 4.1e-43 178.3 140 69.3
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 5.4e-43 177.9 143 66.4
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 5.4e-43 177.9 143 66.4
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 5.4e-43 177.9 140 70.7
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 7.0e-43 177.6 143 67.8
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 7.0e-43 177.6 136 69.1
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 9.1e-43 177.2 144 68.8
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 9.1e-43 177.2 140 68.6
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 1.2e-42 176.8 143 67.8
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 1.2e-42 176.8 140 69.3
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.2e-42 176.8 134 69.4
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 1.6e-42 176.4 140 67.1
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 1.6e-42 176.4 143 69.2
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 1.6e-42 176.4 143 66.4
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 2.0e-42 176.0 144 68.1
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 2.0e-42 176.0 144 68.1
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 3.5e-42 175.3 138 67.4
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 3.5e-42 175.3 143 65.7
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 3.5e-42 175.3 143 65.7
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 3.5e-42 175.3 143 65.7
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 3.5e-42 175.3 144 67.4
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 4.5e-42 174.9 144 67.4
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 4.5e-42 174.9 144 68.8
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 4.5e-42 174.9 141 61.7
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 5.9e-42 174.5 143 67.8
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 5.9e-42 174.5 143 69.2
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 7.7e-42 174.1 143 67.8
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 7.7e-42 174.1 143 67.8
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 7.7e-42 174.1 143 67.8
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 7.7e-42 174.1 143 67.8
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 7.7e-42 174.1 143 67.8
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 7.7e-42 174.1 140 66.4
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 1.0e-41 173.7 144 66.0
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 1.3e-41 173.3 144 66.7
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 1.7e-41 172.9 140 67.9
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 1.7e-41 172.9 143 66.4
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 2.3e-41 172.6 144 66.7
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 2.3e-41 172.6 144 66.7
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 2.9e-41 172.2 144 66.7
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 2.9e-41 172.2 140 67.1
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 2.9e-41 172.2 140 67.9
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 2.9e-41 172.2 140 67.9
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 3.8e-41 171.8 140 69.3
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 3.8e-41 171.8 137 68.6
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 3.8e-41 171.8 144 63.2
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 3.8e-41 171.8 143 68.5
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 5.0e-41 171.4 140 67.9
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 6.5e-41 171.0 143 67.1
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 6.5e-41 171.0 140 67.1
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 8.6e-41 170.6 140 63.6
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 8.6e-41 170.6 144 64.6
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.1e-40 170.2 140 65.0
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 1.5e-40 169.9 140 65.0
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 1.9e-40 169.5 143 65.7
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 3.3e-40 168.7 139 69.1
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 3.3e-40 168.7 139 69.1
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 4.2e-40 168.3 145 65.5
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 7.2e-40 167.5 135 67.4
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 7.2e-40 167.5 143 67.8
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 7.2e-40 167.5 143 65.7
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 7.2e-40 167.5 137 66.4
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 9.5e-40 167.2 145 66.9
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.2e-39 166.8 144 61.8
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 1.6e-39 166.4 140 65.0
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 2.8e-39 165.6 141 61.0
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 3.6e-39 165.2 138 65.9
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 3.6e-39 165.2 140 62.9
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 3.0e-38 162.2 143 63.6
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 6.8e-38 161.0 141 61.7
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 8.9e-38 160.6 141 62.4
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 7.5e-37 157.5 144 62.5
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 2.8e-36 155.6 117 67.5
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 3.7e-36 155.2 113 71.7
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.4e-35 153.3 117 68.4
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 1.8e-35 152.9 142 59.9
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 1.2e-34 150.2 145 60.7
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 3.5e-34 148.7 143 60.1
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 4.5e-34 148.3 137 59.1
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 7.8e-34 147.5 143 58.7
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 3.8e-33 145.2 143 60.8
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 8.6e-33 144.1 117 62.4
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 4.3e-32 141.7 155 55.5
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 8.0e-31 137.5 141 53.2
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.4e-30 136.7 124 60.5
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 2.3e-30 136.0 120 61.7
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 8.9e-30 134.0 147 51.7
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 8.9e-30 134.0 89 75.3
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 8.9e-30 134.0 162 51.9
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.5e-29 133.3 122 59.0
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 2.0e-29 132.9 142 54.9
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 2.2e-28 129.4 120 58.3
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 3.7e-28 128.6 113 58.4
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 6.4e-28 127.9 88 72.7
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 2.3e-25 119.4 143 53.1
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 9.5e-24 114.0 67 77.6
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 3.6e-23 112.1 93 68.8
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 3.1e-22 109.0 92 67.4
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 4.9e-20 101.7 88 56.8
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 3.5e-18 95.5 93 60.2
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 6.6e-17 91.3 137 40.9
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 1.6e-15 86.7 82 63.4
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 1.6e-15 86.7 52 75.0
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 4.4e-13 78.6 77 63.6
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 1.6e-10 70.1 143 38.5
PSO541G1472 Papaver somniferum HOM05D004382 ORTHO05D005181 8.9e-06 54.3 38 73.7


User provided reference genes

Program Settings