Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7470 Papaver somniferum HOM05D005775 ORTHO05D000023 9.0e-129 464.2 345 100.0
PSO541G6072 Papaver somniferum HOM05D005775 ORTHO05D000023 1.2e-109 400.6 333 94.0
PSO302G0009 Papaver somniferum HOM05D005775 ORTHO05D000023 9.7e-107 391.0 332 92.5
Haze_04786 Corylus avellana HOM05D005775 ORTHO05D000023 2.2e-58 230.3 334 61.7
Aqoxy2G03167 Aquilegia oxysepala HOM05D005775 ORTHO05D000023 4.9e-58 229.2 324 60.5
GSVIVG01011040001 Vitis vinifera HOM05D005775 ORTHO05D000023 3.5e-56 223.0 315 71.1
MBI18_g06533_MAGBIO Magnolia biondii HOM05D005775 ORTHO05D000023 1.3e-55 221.1 332 67.2
QL12p023176 Quercus lobata HOM05D005775 ORTHO05D000023 3.9e-55 219.5 324 69.1
Eucgr.H01610 Eucalyptus grandis HOM05D005775 ORTHO05D000023 1.1e-54 218.0 323 66.9
Hma1.2p1_0209F.1_g089290 Hydrangea macrophylla HOM05D005775 ORTHO05D000023 1.9e-54 217.2 327 69.1
Lj2C1182T1 Lonicera japonica HOM05D005775 ORTHO05D000023 1.9e-54 217.2 318 61.3
MELO3C014018.2 Cucumis melo HOM05D005775 ORTHO05D000023 3.3e-54 216.5 316 69.9
Dinv32979 Davidia involucrata HOM05D005775 ORTHO05D000023 3.3e-54 216.5 324 67.6
Gohir.D08G079600 Gossypium hirsutum HOM05D005775 ORTHO05D000023 3.3e-54 216.5 324 59.6
Rhsim01G0278600 Rhododendron simsii HOM05D005775 ORTHO05D000023 3.3e-54 216.5 316 60.1
EL10Ac7g17159 Beta vulgaris HOM05D005775 ORTHO05D000023 4.3e-54 216.1 334 57.5
Thecc.01G287300 Theobroma cacao HOM05D005775 ORTHO05D000023 4.3e-54 216.1 324 59.9
Gorai.004G084600 Gossypium raimondii HOM05D005775 ORTHO05D000023 5.6e-54 215.7 324 59.9
Ciclev10019759m.g Citrus clementina HOM05D005775 ORTHO05D000023 7.3e-54 215.3 335 57.9
Manes.01G212200 Manihot esculenta HOM05D005775 ORTHO05D000023 1.2e-53 214.5 316 61.4
Sed0017897 Sechium edule HOM05D005775 ORTHO05D000023 1.6e-53 214.2 339 65.8
AUR62043492 Chenopodium quinoa HOM05D005775 ORTHO05D006285 2.8e-53 213.4 332 61.7
CsaV3_3G003500 Cucumis sativus L. HOM05D005775 ORTHO05D000023 1.1e-52 211.5 316 68.7
Actinidia24301 Actinidia chinensis HOM05D005775 ORTHO05D000023 1.8e-52 210.7 317 60.9
vmacro02530 Vaccinium macrocarpon HOM05D005775 ORTHO05D000023 1.8e-52 210.7 316 59.5
Sc17g0003740 Simmondsia chinensis HOM05D005775 ORTHO05D000023 3.1e-52 209.9 324 64.8
Gohir.A08G071400 Gossypium hirsutum HOM05D005775 ORTHO05D000023 4.0e-52 209.5 324 59.0
TAR365G0919 Trochodendron aralioides HOM05D005775 ORTHO05D000023 8.9e-52 208.4 324 68.5
Dinv11278 Davidia involucrata HOM05D005775 ORTHO05D000023 1.2e-51 208.0 317 66.9
Peaxi162Scf00517g00426 Petunia axillaris HOM05D005775 ORTHO05D000023 1.2e-51 208.0 316 59.2
Oeu047904.1 Olea europaea HOM05D005775 ORTHO05D000023 1.5e-51 207.6 316 69.3
Cpa.g.sc731.2 Carica papaya HOM05D005775 ORTHO05D000023 2.6e-51 206.8 314 69.7
CiPaw.09G181700 Carya illinoinensis HOM05D005775 ORTHO05D000023 3.4e-51 206.5 324 66.7
Ah.08g220410 Amaranthus hybridus HOM05D005775 ORTHO05D000023 4.4e-51 206.1 326 63.8
ClCG00G000240 Citrullus lanatus HOM05D005775 ORTHO05D000023 7.6e-51 205.3 324 66.7
ClCG10G003500 Citrullus lanatus HOM05D005775 ORTHO05D000023 7.6e-51 205.3 324 66.7
Cc01_g19990 Coffea canephora HOM05D005775 ORTHO05D000023 7.6e-51 205.3 319 68.3
CSS0012831 Camellia sinensis var. sinensis HOM05D005775 ORTHO05D000023 9.9e-51 204.9 315 59.0
AUR62037928 Chenopodium quinoa HOM05D005775 ORTHO05D000023 1.7e-50 204.1 326 60.7
Atru.chr5.1309 Acer truncatum HOM05D005775 ORTHO05D000023 8.4e-50 201.8 311 69.1
Rhsim13G0020300 Rhododendron simsii HOM05D005775 ORTHO05D000023 1.9e-49 200.7 325 66.5
RcHm_v2.0_Chr6g0292231 Rosa chinensis HOM05D005775 ORTHO05D000023 1.9e-49 200.7 314 62.1
CAN.G438.46 Capsicum annuum HOM05D005775 ORTHO05D000023 3.2e-49 199.9 316 66.5
ATR0487G016 Amborella trichopoda HOM05D005775 ORTHO05D000023 4.1e-49 199.5 324 59.0
Lalb_Chr17g0335721 Lupinus albus HOM05D005775 ORTHO05D000023 4.1e-49 199.5 316 59.5
Psat1g018400 Pisum sativum HOM05D005775 ORTHO05D000023 7.1e-49 198.7 320 64.4
Atru.BG.65.p Acer truncatum HOM05D005775 ORTHO05D000023 9.2e-49 198.4 306 69.6
arahy.Tifrunner.gnm1.ann1.9RSW73 Arachis hypogaea HOM05D005775 ORTHO05D000023 9.2e-49 198.4 312 65.4
Prupe.8G249700 Prunus persica HOM05D005775 ORTHO05D000023 9.2e-49 198.4 319 58.0
COL.COLO4_08057 Corchorus olitorius HOM05D005775 ORTHO05D000023 1.2e-48 198.0 328 65.9
DCAR_005831 Daucus carota HOM05D005775 ORTHO05D000023 1.2e-48 198.0 337 54.3
Glyma.03G148400 Glycine max HOM05D005775 ORTHO05D000023 2.1e-48 197.2 325 54.5
Solyc07g053060.3 Solanum lycopersicum HOM05D005775 ORTHO05D000023 2.1e-48 197.2 316 65.8
Potri.016G119600 Populus trichocarpa HOM05D005775 ORTHO05D000023 2.7e-48 196.8 316 56.3
MD03G1273200 Malus domestica HOM05D005775 ORTHO05D000023 4.6e-48 196.1 317 66.9
CANSAT25G1854 Cannabis sativa HOM05D005775 ORTHO05D000023 7.8e-48 195.3 335 63.6
Lj1g0019119 Lotus japonicus HOM05D005775 ORTHO05D000023 7.8e-48 195.3 320 55.3
FAN20G1843 Fragaria x ananassa HOM05D005775 ORTHO05D000023 1.3e-47 194.5 316 58.5
Sabra16G0115500 Salix brachista HOM05D005775 ORTHO05D000023 1.3e-47 194.5 316 58.5
Carub.0004s1199 Capsella rubella HOM05D005775 ORTHO05D000023 1.7e-47 194.1 315 56.2
arahy.Tifrunner.gnm1.ann1.84DKWJ Arachis hypogaea HOM05D005775 ORTHO05D000023 3.0e-47 193.4 312 65.7
PGSC0003DMG400026158 Solanum tuberosum HOM05D005775 ORTHO05D000023 3.9e-47 193.0 316 65.8
TPR.G16641 Trifolium pratense HOM05D005775 ORTHO05D000023 3.9e-47 193.0 312 64.7
AT2G30780 Arabidopsis thaliana HOM05D005775 ORTHO05D000023 8.6e-47 191.8 315 55.6
Thhalv10016605m.g Eutrema salsugineum HOM05D005775 ORTHO05D000023 8.6e-47 191.8 315 54.6
FAN27G3110 Fragaria x ananassa HOM05D005775 ORTHO05D000023 8.6e-47 191.8 316 57.9
TAR636G1825 Trochodendron aralioides HOM05D005775 ORTHO05D000023 1.1e-46 191.4 324 66.0
Sopen07g026610 Solanum pennellii HOM05D005775 ORTHO05D000023 2.5e-46 190.3 316 65.5
AL4G25690 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 3.3e-46 189.9 315 56.2
Hund05366 Selenicereus undatus HOM05D005775 ORTHO05D000023 5.6e-46 189.1 325 55.4
AL4G25710 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 7.3e-46 188.7 315 56.5
CARHR124250 Cardamine hirsuta HOM05D005775 ORTHO05D000023 7.3e-46 188.7 315 54.9
BraA04t17874Z Brassica rapa HOM05D005775 ORTHO05D000023 9.6e-46 188.3 315 54.9
THA.LOC104817539 Tarenaya hassleriana HOM05D005775 ORTHO05D000023 1.6e-45 187.6 320 55.3
Aa31LG5G6080 Aethionema arabicum HOM05D005775 ORTHO05D000023 2.8e-45 186.8 315 55.6
FAN24G2890 Fragaria x ananassa HOM05D005775 ORTHO05D000023 2.8e-45 186.8 311 65.3
MSTRG.12583 Avicennia marina HOM05D005775 ORTHO05D000023 3.6e-45 186.4 316 65.5
BolC4t27488H Brassica oleracea HOM05D005775 ORTHO05D000023 3.6e-45 186.4 315 55.2
Aa31LG1G29420 Aethionema arabicum HOM05D005775 ORTHO05D000023 4.7e-45 186.0 339 56.9
C04p59780 Brassica napus HOM05D005775 ORTHO05D000023 4.7e-45 186.0 315 55.6
Ca_02584_v3 Cicer arietinum L. HOM05D005775 ORTHO05D000023 6.2e-45 185.7 320 64.4
HanXRQChr09g0252061 Helianthus annuus HOM05D005775 ORTHO05D000023 1.1e-44 184.9 323 54.2
TWI14G1024 Tripterygium wilfordii HOM05D005775 ORTHO05D000023 1.1e-44 184.9 316 55.7
A04p23470 Brassica napus HOM05D005775 ORTHO05D000023 1.4e-44 184.5 315 55.2
Sed0008104 Sechium edule HOM05D005775 ORTHO05D000023 1.8e-44 184.1 325 63.1
ClCG00G003600 Citrullus lanatus HOM05D005775 ORTHO05D000023 2.4e-44 183.7 324 36.4
FAN15G0955 Fragaria x ananassa HOM05D005775 ORTHO05D000023 3.1e-44 183.3 316 63.9
Migut.N02129 Erythranthe guttata HOM05D005775 ORTHO05D000023 5.2e-44 182.6 317 64.7
Migut.O00883 Erythranthe guttata HOM05D005775 ORTHO05D000023 5.2e-44 182.6 317 64.7
VMungo1383G3055 Vigna mungo HOM05D005775 ORTHO05D000023 5.2e-44 182.6 316 59.2
SHI15422 Sapria himalayana HOM05D005775 ORTHO05D000023 6.9e-44 182.2 332 36.4
DCAR_002776 Daucus carota HOM05D005775 ORTHO05D000023 1.5e-43 181.0 313 54.3
Medtr2g049540 Medicago truncatula HOM05D005775 ORTHO05D000023 2.0e-43 180.6 318 54.1
Medtr5g076010 Medicago truncatula HOM05D005775 ORTHO05D000023 2.0e-43 180.6 318 54.4
THA.LOC104800814 Tarenaya hassleriana HOM05D005775 ORTHO05D000023 2.0e-43 180.6 316 55.4
TPR.G17547 Trifolium pratense HOM05D005775 ORTHO05D000023 4.4e-43 179.5 320 62.8
C04p19810 Brassica napus HOM05D005775 ORTHO05D000023 5.8e-43 179.1 317 36.3
ECA234G1745 Erigeron canadensis HOM05D005775 ORTHO05D000023 5.8e-43 179.1 323 52.6
Sp4g13280 Schrenkiella parvula HOM05D005775 ORTHO05D000023 5.8e-43 179.1 315 52.7
AT2G48000 Arabidopsis thaliana HOM05D005775 ORTHO05D000023 7.6e-43 178.7 343 50.1
SGA_v2.0_scaffold172G39044 Striga asiatica HOM05D005775 ORTHO05D000023 1.7e-42 177.6 316 63.3
Glyma.19G151700 Glycine max HOM05D005775 ORTHO05D000023 2.9e-42 176.8 317 55.2
Phvul.001G146400 Phaseolus vulgaris HOM05D005775 ORTHO05D000023 3.8e-42 176.4 317 62.1
unitig_21.g20288 Utricularia gibba HOM05D005775 ORTHO05D000023 1.4e-41 174.5 316 63.9
HanXRQChr12g0362741 Helianthus annuus HOM05D005775 ORTHO05D000023 3.2e-41 173.3 324 51.9
SalBow2G0958 Salvia bowleyana HOM05D005775 ORTHO05D000023 9.3e-41 171.8 316 63.0
Carub.0004s3072 Capsella rubella HOM05D005775 ORTHO05D000023 1.2e-40 171.4 340 38.8
CARHR143390 Cardamine hirsuta HOM05D005775 ORTHO05D000023 1.3e-39 167.9 319 51.7
SEGI_28259 Sequoiadendron giganteum HOM05D005775 ORTHO05D000023 1.7e-39 167.5 324 55.2
Lsat_1_v5_gn_6_117561 Lactuca sativa HOM05D005775 ORTHO05D000023 7.6e-35 152.1 326 48.8
Os05g0407900 Oryza sativa ssp. japonica HOM05D005775 ORTHO05D000023 2.4e-33 147.1 309 48.5
Zm00001eb287820 Zea mays HOM05D005775 ORTHO05D000023 7.1e-33 145.6 309 54.4
ClCG00G000230 Citrullus lanatus HOM05D005775 ORTHO05D000023 2.7e-32 143.7 119 59.7
FvH4_2g24360 Fragaria vesca HOM05D005775 ORTHO05D000023 7.9e-32 142.1 257 71.2
HPP92_003166 Vanilla planifolia HOM05D005775 ORTHO05D000023 1.5e-30 137.9 332 43.1
vmacro14952 Vaccinium macrocarpon HOM05D005775 ORTHO05D000023 2.4e-28 130.6 249 58.6
BcaB02g10341 Brassica carinata HOM05D005775 ORTHO05D000023 4.6e-24 116.3 316 42.4
Nn5g27607 Nelumbo nucifera HOM05D005775 ORTHO05D000023 2.8e-21 107.1 270 63.0
CDE10G1068 Ceratophyllum demersum HOM05D005775 ORTHO05D000023 5.8e-19 99.4 111 48.6
MD11G1295800 Malus domestica HOM05D005775 ORTHO05D000023 5.8e-19 99.4 105 48.6
MD11G1295900 Malus domestica HOM05D005775 ORTHO05D000023 1.1e-17 95.1 80 57.5
BolC4t23514H Brassica oleracea HOM05D005775 ORTHO05D000023 1.4e-17 94.7 106 49.1
AL4G47600 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 4.2e-17 93.2 106 41.5
Actinidia24862 Actinidia chinensis HOM05D005775 ORTHO05D000023 2.3e-15 87.4 306 26.5
Pp3c1_37670 Physcomitrium patens HOM05D005775 ORTHO05D000023 7.9e-08 62.4 111 36.9
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis HOM05D005775 ORTHO05D000023 5.1e-07 59.7 105 36.2


User provided reference genes

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