Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 7.4e-203 710.3 355 100.0
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 4.4e-187 657.9 329 99.1
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.5e-168 595.1 347 85.3
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 2.9e-162 575.5 349 82.5
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 3.2e-161 572.0 346 80.9
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.7e-160 568.9 350 82.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 3.5e-160 568.5 346 81.5
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.0e-159 567.0 343 80.8
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.0e-159 567.0 349 79.7
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.3e-159 566.6 346 80.9
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.7e-159 566.2 347 80.7
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.7e-159 566.2 347 80.4
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.7e-159 566.2 346 81.2
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.0e-159 565.5 348 79.0
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 3.9e-159 565.1 346 80.6
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 3.9e-159 565.1 346 80.6
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.5e-158 563.1 351 78.9
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.5e-158 563.1 345 81.4
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.9e-158 562.8 346 80.1
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 3.3e-158 562.0 351 80.3
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 7.3e-158 560.8 345 80.0
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.6e-157 559.7 350 79.4
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 6.2e-157 557.8 346 78.6
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 8.1e-157 557.4 351 79.8
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.1e-156 557.0 345 80.9
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.1e-156 555.4 345 80.9
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.0e-156 555.1 349 79.9
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 5.2e-156 554.7 347 81.0
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 6.4e-154 547.7 384 72.7
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.1e-153 547.0 350 76.6
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.4e-153 545.8 324 83.6
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 3.2e-153 545.4 367 74.7
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.1e-153 545.0 350 76.9
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 9.2e-153 543.9 339 79.9
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 2.1e-152 542.7 324 83.0
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 4.6e-152 541.6 349 77.4
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 7.8e-152 540.8 350 77.7
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.0e-151 540.4 348 76.1
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.3e-151 540.0 362 76.8
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 2.3e-151 539.3 348 75.9
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 3.0e-151 538.9 347 76.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.9e-151 538.5 347 78.1
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 3.9e-151 538.5 353 76.2
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.1e-150 537.0 346 77.2
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.5e-150 536.6 348 75.3
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 2.5e-150 535.8 346 76.0
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 4.3e-150 535.0 354 75.1
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 9.5e-150 533.9 327 81.0
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 4.7e-149 531.6 357 75.6
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 6.2e-149 531.2 354 74.9
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 8.1e-149 530.8 350 75.4
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.1e-148 530.4 347 75.5
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.4e-148 530.0 350 74.9
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.4e-148 529.3 346 76.6
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 2.4e-148 529.3 349 75.6
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.5e-147 526.6 347 75.2
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.5e-147 526.6 331 78.5
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.0e-147 526.2 354 74.3
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 7.6e-147 524.2 348 76.1
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 1.3e-146 523.5 346 75.4
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.3e-146 523.5 331 78.2
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.7e-146 523.1 351 75.5
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.2e-146 522.7 352 75.9
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 6.4e-146 521.2 348 75.0
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.4e-145 520.0 346 74.6
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.2e-144 516.9 350 73.7
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.6e-144 516.5 354 72.9
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 2.1e-144 516.2 379 70.7
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.7e-144 515.8 333 77.2
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 3.5e-144 515.4 348 73.3
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 2.3e-143 512.7 374 69.5
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.9e-143 511.9 350 74.0
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 5.1e-143 511.5 353 74.2
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 6.6e-143 511.1 326 77.6
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 2.5e-142 509.2 306 82.4
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.5e-142 509.2 350 72.9
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 4.3e-142 508.4 341 73.3
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.6e-141 506.5 327 78.0
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 2.1e-141 506.1 331 74.6
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.8e-141 505.8 353 73.1
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 3.6e-141 505.4 401 66.1
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 1.4e-140 503.4 336 73.8
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.4e-140 503.4 346 72.0
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 2.4e-140 502.7 331 72.2
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 9.0e-140 500.7 322 75.5
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.5e-139 500.0 325 74.5
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-139 499.6 329 75.7
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.4e-139 498.8 334 74.6
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.4e-139 498.8 348 72.4
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-138 496.9 358 69.3
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.7e-138 496.5 329 71.4
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.7e-138 496.5 330 72.7
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 1.9e-137 493.0 331 72.2
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 3.2e-137 492.3 321 73.2
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 3.2e-137 492.3 368 70.1
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.6e-136 490.0 321 72.9
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 2.1e-136 489.6 321 73.5
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.7e-136 489.2 337 73.0
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 2.7e-136 489.2 342 71.1
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 4.6e-136 488.4 321 72.6
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 4.6e-136 488.4 338 74.0
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 6.0e-136 488.0 348 68.7
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 7.8e-136 487.6 347 68.0
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.7e-135 486.5 345 68.4
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 3.0e-135 485.7 345 68.4
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 8.7e-135 484.2 331 70.7
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.9e-134 483.0 348 67.8
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 5.6e-134 481.5 318 73.3
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.3e-133 480.3 348 67.2
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.3e-133 480.3 353 66.9
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.6e-133 479.9 322 71.7
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 2.8e-133 479.2 336 72.0
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 4.8e-133 478.4 359 66.9
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 8.1e-133 477.6 345 70.7
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.4e-132 476.9 345 70.7
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.0e-132 475.3 314 74.8
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 5.3e-132 474.9 306 77.1
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 3.4e-131 472.2 356 65.7
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 7.6e-131 471.1 330 71.5
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 4.2e-129 465.3 330 69.4
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.2e-128 463.8 316 73.4
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 3.5e-128 462.2 333 67.3
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.6e-125 453.4 328 67.7
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.4e-124 450.3 352 65.1
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 2.4e-124 449.5 265 83.4
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 3.4e-123 445.7 273 81.7
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.4e-121 440.3 550 48.2
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.2e-120 437.2 346 65.9
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.3e-117 427.2 284 77.5
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 2.5e-113 412.9 267 77.5
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 5.3e-108 395.2 350 59.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 6.1e-104 381.7 344 56.4
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.5e-102 376.3 227 80.2
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 4.8e-101 372.1 332 55.7
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.9e-97 360.1 242 71.9
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 8.2e-93 344.7 281 65.5
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.1e-92 342.8 206 83.0
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 5.3e-92 342.0 224 76.8
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 2.5e-89 333.2 288 56.9
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 2.0e-86 323.6 205 79.0
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.7e-85 320.5 267 64.0
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 2.2e-82 310.1 229 70.3
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 8.0e-80 301.6 187 80.2
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 5.0e-74 282.3 163 83.4
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.2e-67 261.2 380 40.5
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.7e-67 258.5 179 69.8
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 2.6e-62 243.4 179 70.4
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 2.4e-60 236.9 213 61.0
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.4e-60 236.9 161 70.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.3e-58 231.1 269 48.3
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 4.3e-57 226.1 168 69.0
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 7.0e-52 208.8 138 72.5
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 3.0e-50 203.4 342 40.1
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.1e-44 184.9 193 52.3
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 3.2e-36 156.8 112 72.3
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.2e-32 144.8 153 50.3
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.8e-29 133.3 299 33.4
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 1.3e-26 124.8 263 31.6
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 2.3e-26 124.0 71 84.5
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 1.9e-25 120.9 380 31.1
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 7.3e-25 119.0 206 38.3
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.1e-19 100.9 69 68.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.7e-19 100.5 57 84.2
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 6.0e-19 99.4 63 73.0
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.3e-18 97.4 61 77.0
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.9e-18 96.7 91 53.8
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.9e-13 80.5 75 53.3
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.0e-10 72.0 51 64.7
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 4.0e-07 60.1 81 42.0


User provided reference genes

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