Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 7.0e-256 886.7 426 100.0
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.8e-172 608.2 427 69.1
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 4.8e-172 608.2 427 67.0
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 4.0e-171 605.1 427 67.7
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.9e-168 596.3 427 66.7
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 3.2e-168 595.5 427 66.3
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.0e-166 590.5 428 64.5
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 8.7e-166 587.4 434 62.9
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 1.9e-165 586.3 426 64.8
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 7.4e-165 584.3 426 64.6
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 2.2e-164 582.8 425 65.6
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 8.2e-164 580.9 425 65.2
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.4e-163 580.1 438 62.3
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.8e-163 579.7 412 66.7
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 3.1e-163 578.9 430 64.9
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 3.1e-163 578.9 424 64.9
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 4.1e-163 578.6 425 65.4
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 5.3e-163 578.2 431 64.7
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 2.0e-162 576.2 426 65.0
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 3.4e-162 575.5 426 63.1
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 4.5e-162 575.1 424 64.2
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.0e-161 573.9 443 62.3
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 1.7e-161 573.2 454 60.8
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.7e-161 573.2 427 63.7
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.2e-161 572.8 427 63.2
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.9e-161 572.4 442 62.4
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.1e-160 570.5 442 62.2
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 1.6e-159 566.6 432 61.3
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.6e-159 566.6 435 62.1
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 3.9e-158 562.0 493 57.4
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 5.1e-158 561.6 481 58.0
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 8.8e-158 560.8 429 63.2
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.5e-157 560.1 430 64.9
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 5.7e-157 558.1 432 60.9
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 7.4e-157 557.8 423 62.9
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 9.7e-157 557.4 427 62.8
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.3e-156 557.0 426 62.4
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 1.3e-156 557.0 415 63.1
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 1.7e-156 556.6 427 62.8
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 1.7e-156 556.6 427 62.8
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 2.2e-156 556.2 426 61.0
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 2.8e-156 555.8 427 62.1
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 6.3e-156 554.7 426 62.7
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.8e-155 553.1 427 62.3
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.8e-155 553.1 427 62.3
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 2.0e-154 549.7 418 61.7
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 7.7e-154 547.7 426 61.3
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.0e-153 547.4 373 69.7
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 2.9e-153 545.8 432 60.9
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.1e-152 543.9 435 60.5
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 1.1e-152 543.9 467 56.7
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 1.1e-152 543.9 432 60.6
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 3.2e-152 542.3 428 61.4
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 4.2e-152 542.0 426 61.5
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 5.5e-152 541.6 438 59.1
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 6.7e-150 534.6 413 61.5
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 2.0e-149 533.1 432 58.6
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 9.7e-149 530.8 454 57.9
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 2.2e-148 529.6 430 60.7
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 3.7e-148 528.9 427 60.2
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.8e-147 526.6 459 54.5
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 2.4e-147 526.2 436 57.8
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 2.4e-147 526.2 429 59.4
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 5.9e-146 521.5 437 56.8
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 5.0e-145 518.5 426 58.5
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.6e-143 513.5 425 56.7
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.4e-142 510.4 426 56.3
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.5e-141 506.9 434 56.7
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 3.8e-137 492.3 442 53.8
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 3.2e-136 489.2 345 64.9
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 5.5e-136 488.4 425 55.8
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 9.4e-136 487.6 431 55.2
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.0e-134 484.2 425 55.3
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.4e-134 483.8 431 55.0
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.0e-134 482.6 425 55.3
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 2.4e-131 473.0 350 63.7
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.7e-129 466.8 429 54.3
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 8.5e-129 464.5 459 53.8
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 8.3e-124 448.0 427 52.0
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.8e-123 446.8 411 52.1
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 7.0e-123 444.9 433 52.4
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.5e-122 442.2 416 48.8
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.6e-119 432.6 426 50.9
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.6e-119 432.6 426 50.9
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.0e-119 431.4 349 60.5
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.1e-115 421.0 334 60.5
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.8e-115 420.2 385 51.9
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 2.3e-110 403.3 448 42.9
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 2.0e-106 390.2 419 44.9
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 1.0e-105 387.9 496 40.1
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 3.6e-103 379.4 436 41.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.4e-83 314.3 383 40.7
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 2.4e-83 313.5 199 72.4
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 3.4e-77 293.1 249 55.8
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 3.2e-75 286.6 223 59.6
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 9.0e-70 268.5 178 69.7
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 5.6e-64 249.2 187 61.0
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.1e-62 245.0 189 58.7
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.0e-57 226.9 159 62.9
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 1.1e-56 224.9 188 58.0
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 5.1e-49 199.5 149 59.1
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 4.5e-45 186.4 145 62.1
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.7e-44 184.5 145 61.4
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 5.0e-44 183.0 145 60.7
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 5.0e-44 183.0 144 61.1
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.4e-43 181.4 123 67.5
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.6e-42 176.8 120 65.0
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.3e-41 174.1 121 68.6
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.1e-41 172.9 119 68.9
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 9.7e-40 168.7 126 64.3
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.9e-36 157.1 105 65.7
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 4.2e-35 153.3 100 68.0
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 1.7e-31 141.4 152 45.4
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-27 128.6 84 67.9
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.2e-26 125.2 111 49.5
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 8.0e-26 122.5 100 58.0
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 1.4e-25 121.7 76 72.4
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 1.4e-25 121.7 83 62.7
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 1.5e-24 118.2 75 69.3
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 3.3e-24 117.1 88 62.5
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 9.7e-24 115.5 115 52.2
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.9e-20 104.0 88 54.5
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 3.6e-18 97.1 61 67.2
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 5.2e-17 93.2 54 72.2
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 1.5e-16 91.7 59 64.4
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 4.4e-16 90.1 120 35.0
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-12 78.6 81 45.7
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 3.8e-12 77.0 83 45.8
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.0e-09 68.9 57 56.1
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 1.5e-08 65.1 73 45.2
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 2.8e-07 60.8 69 44.9
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 3.7e-07 60.5 101 35.6
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.7e-07 60.5 37 64.9
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 8.3e-07 59.3 101 35.6
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 8.3e-07 59.3 42 64.3
C05p13980 Brassica napus HOM05D000840 ORTHO05D000670 3.1e-06 57.4 40 65.0
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 7.0e-06 56.2 101 34.7


User provided reference genes

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