Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5654 Papaver somniferum HOM05D003673 ORTHO05D004764 1.8e-240 835.5 415 100.0
PSO675G0095 Papaver somniferum HOM05D003673 ORTHO05D004764 7.6e-231 803.5 444 91.4
Nn7g37943 Nelumbo nucifera HOM05D003673 ORTHO05D004764 8.2e-177 624.0 442 71.0
TAR626G0427 Trochodendron aralioides HOM05D003673 ORTHO05D004764 5.5e-173 611.3 426 71.8
Cpa.g.sc50.111 Carica papaya HOM05D003673 ORTHO05D004764 3.9e-171 605.1 428 71.0
Ciclev10031587m.g Citrus clementina HOM05D003673 ORTHO05D004764 1.7e-169 599.7 426 69.5
Thecc.01G168600 Theobroma cacao HOM05D003673 ORTHO05D004764 4.8e-169 598.2 433 69.5
Manes.02G088900 Manihot esculenta HOM05D003673 ORTHO05D004764 3.1e-168 595.5 434 68.7
Sabra02G0046800 Salix brachista HOM05D003673 ORTHO05D004764 3.1e-168 595.5 430 68.8
Aqoxy1G01891 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 5.3e-168 594.7 427 70.0
Gohir.D07G086000 Gossypium hirsutum HOM05D003673 ORTHO05D004764 5.3e-168 594.7 429 68.1
Gorai.001G092000 Gossypium raimondii HOM05D003673 ORTHO05D004764 1.2e-167 593.6 429 67.8
COL.COLO4_38400 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.6e-167 593.2 435 68.0
Gohir.A07G080400 Gossypium hirsutum HOM05D003673 ORTHO05D004764 2.6e-167 592.4 429 68.1
HanXRQChr14g0451901 Helianthus annuus HOM05D003673 ORTHO05D004764 2.6e-167 592.4 431 70.1
Prupe.3G177700 Prunus persica HOM05D003673 ORTHO05D004764 3.5e-167 592.0 439 66.7
vmacro04781 Vaccinium macrocarpon HOM05D003673 ORTHO05D004764 4.5e-167 591.7 423 68.1
Potri.002G057400 Populus trichocarpa HOM05D003673 ORTHO05D004764 5.9e-167 591.3 430 68.6
Ah.01g013590 Amaranthus hybridus HOM05D003673 ORTHO05D004764 7.7e-167 590.9 427 67.4
ECA238G4715 Erigeron canadensis HOM05D003673 ORTHO05D004764 1.0e-166 590.5 418 70.3
ClCG11G016540 Citrullus lanatus HOM05D003673 ORTHO05D004764 2.9e-166 589.0 436 67.9
QL08p044989 Quercus lobata HOM05D003673 ORTHO05D004764 3.8e-166 588.6 430 68.6
Aa31LG1G7910 Aethionema arabicum HOM05D003673 ORTHO05D004764 5.0e-166 588.2 416 68.8
RcHm_v2.0_Chr2g0152131 Rosa chinensis HOM05D003673 ORTHO05D004764 6.5e-166 587.8 430 67.0
AUR62015128 Chenopodium quinoa HOM05D003673 ORTHO05D004764 8.5e-166 587.4 441 65.1
AUR62017589 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.1e-165 587.0 439 65.1
Cfa023358 Carpinus fangiana HOM05D003673 ORTHO05D004764 1.9e-165 586.3 433 67.2
Carub.0001s0594 Capsella rubella HOM05D003673 ORTHO05D004764 2.5e-165 585.9 416 68.5
TWI59G0698 Tripterygium wilfordii HOM05D003673 ORTHO05D004764 2.5e-165 585.9 435 67.8
BcaC07g42060 Brassica carinata HOM05D003673 ORTHO05D004764 3.2e-165 585.5 432 67.4
TPR.G10168 Trifolium pratense HOM05D003673 ORTHO05D004764 4.2e-165 585.1 424 67.9
LjContig00049g0013493 Lotus japonicus HOM05D003673 ORTHO05D004764 5.5e-165 584.7 419 68.5
Ca_06264_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 7.2e-165 584.3 421 68.9
Ca_30265_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 7.2e-165 584.3 421 68.9
MELO3C022961.2 Cucumis melo HOM05D003673 ORTHO05D004764 9.4e-165 583.9 424 68.9
Aqoxy1G01890 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 1.6e-164 583.2 434 67.1
AL1G16600 Arabidopsis lyrata HOM05D003673 ORTHO05D004764 2.1e-164 582.8 416 69.0
A09p66930 Brassica napus HOM05D003673 ORTHO05D004764 2.1e-164 582.8 412 68.7
BcaNung07075 Brassica carinata HOM05D003673 ORTHO05D004764 2.7e-164 582.4 413 69.5
MD17G1134800 Malus domestica HOM05D003673 ORTHO05D004764 2.7e-164 582.4 439 66.3
Medtr5g091060 Medicago truncatula HOM05D003673 ORTHO05D004764 3.6e-164 582.0 420 68.6
C08p51160 Brassica napus HOM05D003673 ORTHO05D004764 6.1e-164 581.3 413 68.8
BolC8t52642H Brassica oleracea HOM05D003673 ORTHO05D004764 6.1e-164 581.3 413 68.8
CiPaw.03G191900 Carya illinoinensis HOM05D003673 ORTHO05D004764 6.1e-164 581.3 434 66.4
FAN02G0649 Fragaria x ananassa HOM05D003673 ORTHO05D004764 6.1e-164 581.3 428 66.8
Sp1g05330 Schrenkiella parvula HOM05D003673 ORTHO05D004764 6.1e-164 581.3 416 68.5
BolC5t29254H Brassica oleracea HOM05D003673 ORTHO05D004764 8.0e-164 580.9 413 69.2
CSS0042622 Camellia sinensis var. sinensis HOM05D003673 ORTHO05D004764 1.0e-163 580.5 437 66.8
Haze_13556 Corylus avellana HOM05D003673 ORTHO05D004764 1.0e-163 580.5 440 65.0
C05p04810 Brassica napus HOM05D003673 ORTHO05D004764 1.4e-163 580.1 413 68.8
CsaV3_4G032000 Cucumis sativus L. HOM05D003673 ORTHO05D004764 1.4e-163 580.1 427 67.9
FAN09G3261 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.4e-163 580.1 428 66.6
CANSAT64G2396 Cannabis sativa HOM05D003673 ORTHO05D004764 3.0e-163 578.9 413 67.3
THA.LOC104815838 Tarenaya hassleriana HOM05D003673 ORTHO05D004764 3.0e-163 578.9 432 66.2
FAN05G2105 Fragaria x ananassa HOM05D003673 ORTHO05D004764 4.0e-163 578.6 428 67.5
A10p05210 Brassica napus HOM05D003673 ORTHO05D004764 5.2e-163 578.2 412 68.2
FvH4_6g38670 Fragaria vesca HOM05D003673 ORTHO05D004764 5.2e-163 578.2 428 67.3
FAN14G2563 Fragaria x ananassa HOM05D003673 ORTHO05D004764 5.2e-163 578.2 428 67.3
Rhsim07G0197900 Rhododendron simsii HOM05D003673 ORTHO05D004764 5.2e-163 578.2 440 65.0
BraA09t42028Z Brassica rapa HOM05D003673 ORTHO05D004764 1.5e-162 576.6 419 68.0
Sed0005423 Sechium edule HOM05D003673 ORTHO05D004764 1.5e-162 576.6 432 67.1
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea HOM05D003673 ORTHO05D004764 2.6e-162 575.9 425 67.1
Thhalv10007634m.g Eutrema salsugineum HOM05D003673 ORTHO05D004764 2.6e-162 575.9 416 67.8
Dinv07706 Davidia involucrata HOM05D003673 ORTHO05D004764 3.3e-162 575.5 428 67.1
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea HOM05D003673 ORTHO05D004764 5.7e-162 574.7 422 67.5
Lalb_Chr04g0248921 Lupinus albus HOM05D003673 ORTHO05D004764 5.7e-162 574.7 424 66.3
PGR042G2748 Punica granatum HOM05D003673 ORTHO05D004764 5.7e-162 574.7 423 67.1
BraA10t42788Z Brassica rapa HOM05D003673 ORTHO05D004764 9.7e-162 573.9 412 68.0
EL10Ac9g22832 Beta vulgaris HOM05D003673 ORTHO05D004764 2.8e-161 572.4 426 66.2
DCAR_023045 Daucus carota HOM05D003673 ORTHO05D004764 2.8e-161 572.4 413 67.1
MBI18_g13605_MAGBIO Magnolia biondii HOM05D003673 ORTHO05D004764 2.4e-160 569.3 421 67.0
Sc19g0001760 Simmondsia chinensis HOM05D003673 ORTHO05D004764 9.1e-160 567.4 426 66.2
CANSAT64G0060 Cannabis sativa HOM05D003673 ORTHO05D004764 1.2e-159 567.0 422 65.2
Peaxi162Scf00416g00004 Petunia axillaris HOM05D003673 ORTHO05D004764 4.5e-159 565.1 427 66.7
PGSC0003DMG400017420 Solanum tuberosum HOM05D003673 ORTHO05D004764 7.7e-159 564.3 426 66.0
CDE05G0951 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 1.0e-158 563.9 428 67.3
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla HOM05D003673 ORTHO05D004764 1.0e-158 563.9 436 65.8
PGSC0003DMG400017707 Solanum tuberosum HOM05D003673 ORTHO05D004764 1.3e-158 563.5 426 67.6
Nitab4.5_0000006g0440 Nicotiana tabacum HOM05D003673 ORTHO05D004764 2.2e-158 562.8 426 67.6
Hund22282 Selenicereus undatus HOM05D003673 ORTHO05D004764 2.2e-158 562.8 424 64.4
Sopen07g023610 Solanum pennellii HOM05D003673 ORTHO05D004764 3.8e-158 562.0 427 65.6
Nitab4.5_0002201g0040 Nicotiana tabacum HOM05D003673 ORTHO05D004764 5.0e-158 561.6 417 67.6
CAN.G7.15 Capsicum annuum HOM05D003673 ORTHO05D004764 6.5e-158 561.2 426 66.7
Migut.M00071 Erythranthe guttata HOM05D003673 ORTHO05D004764 8.5e-158 560.8 423 65.5
Solyc07g045050.3 Solanum lycopersicum HOM05D003673 ORTHO05D004764 8.5e-158 560.8 427 65.3
Glyma.14G030400 Glycine max HOM05D003673 ORTHO05D004764 1.1e-157 560.5 422 65.2
Eucgr.A02022 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.5e-157 560.1 433 64.7
Sopen05g024810 Solanum pennellii HOM05D003673 ORTHO05D004764 1.5e-157 560.1 426 66.9
SGA_v2.0_scaffold73G24479 Striga asiatica HOM05D003673 ORTHO05D004764 4.2e-157 558.5 415 65.3
Medtr5g090990 Medicago truncatula HOM05D003673 ORTHO05D004764 1.2e-156 557.0 425 65.6
Psat2g017880 Pisum sativum HOM05D003673 ORTHO05D004764 2.7e-156 555.8 429 65.0
VMungo0647G2026 Vigna mungo HOM05D003673 ORTHO05D004764 4.7e-156 555.1 418 65.6
Oeu051389.1 Olea europaea HOM05D003673 ORTHO05D004764 1.5e-154 550.1 418 65.3
MSTRG.14903 Avicennia marina HOM05D003673 ORTHO05D004764 4.4e-154 548.5 419 64.9
Medtr1g022325 Medicago truncatula HOM05D003673 ORTHO05D004764 4.4e-154 548.5 415 66.0
PSO144G0168 Papaver somniferum HOM05D003673 ORTHO05D004764 3.7e-153 545.4 419 64.9
Phvul.008G194300 Phaseolus vulgaris HOM05D003673 ORTHO05D004764 4.8e-153 545.0 418 64.4
Eucgr.A02024 Eucalyptus grandis HOM05D003673 ORTHO05D004764 6.3e-153 544.7 436 61.7
SEGI_30126 Sequoiadendron giganteum HOM05D003673 ORTHO05D004764 1.6e-151 540.0 421 64.4
BcaB02g06780 Brassica carinata HOM05D003673 ORTHO05D004764 3.8e-150 535.4 412 65.0
EL10Ac9g22831 Beta vulgaris HOM05D003673 ORTHO05D004764 1.5e-149 533.5 405 65.2
SalBow1G2057 Salvia bowleyana HOM05D003673 ORTHO05D004764 6.1e-148 528.1 424 62.5
Eucgr.A02023 Eucalyptus grandis HOM05D003673 ORTHO05D004764 3.0e-147 525.8 434 58.8
PSO210G5105 Papaver somniferum HOM05D003673 ORTHO05D004764 6.8e-147 524.6 423 62.4
unitig_899.g15456 Utricularia gibba HOM05D003673 ORTHO05D004764 2.6e-146 522.7 416 63.7
PSO210G6115 Papaver somniferum HOM05D003673 ORTHO05D004764 3.4e-146 522.3 438 61.2
PSO170G5322 Papaver somniferum HOM05D003673 ORTHO05D004764 2.8e-145 519.2 437 61.3
COL.COLO4_38402 Corchorus olitorius HOM05D003673 ORTHO05D004764 2.4e-144 516.2 418 60.3
Pp3c1_27020 Physcomitrium patens HOM05D003673 ORTHO05D004764 3.1e-144 515.8 413 62.2
Pp3c2_15470 Physcomitrium patens HOM05D003673 ORTHO05D004764 2.7e-143 512.7 418 61.7
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.7e-142 510.0 401 63.3
CANSAT64G0777 Cannabis sativa HOM05D003673 ORTHO05D004764 2.9e-142 509.2 427 58.3
PSO210G1881 Papaver somniferum HOM05D003673 ORTHO05D004764 3.8e-142 508.8 434 59.7
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis HOM05D003673 ORTHO05D004764 6.6e-142 508.1 413 60.8
Mapoly0126s0038 Marchantia polymorpha HOM05D003673 ORTHO05D004764 8.6e-142 507.7 419 59.7
CDE02G2922 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 2.2e-137 493.0 431 60.8
CARHR006180 Cardamine hirsuta HOM05D003673 ORTHO05D004764 1.6e-135 486.9 367 65.4
AT1G06570 Arabidopsis thaliana HOM05D003673 ORTHO05D004764 4.6e-135 485.3 365 65.8
Lsat_1_v5_gn_2_96721 Lactuca sativa HOM05D003673 ORTHO05D004764 4.6e-135 485.3 378 66.4
Zm00001eb232960 Zea mays HOM05D003673 ORTHO05D004764 1.0e-134 484.2 431 56.1
Cre09.g399030 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 3.9e-134 482.3 424 58.0
Lsat_1_v5_gn_6_42781 Lactuca sativa HOM05D003673 ORTHO05D004764 1.1e-133 480.7 421 58.4
HPP92_002268 Vanilla planifolia HOM05D003673 ORTHO05D004764 5.6e-133 478.4 393 60.1
SMO358G0369 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.6e-132 476.9 430 56.5
Dinv07089 Davidia involucrata HOM05D003673 ORTHO05D004764 2.1e-132 476.5 379 63.6
RcHm_v2.0_Chr2g0152141 Rosa chinensis HOM05D003673 ORTHO05D004764 6.2e-132 474.9 370 63.2
Cre09.g398993 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 5.4e-128 461.8 418 55.5
HanXRQChr02g0055101 Helianthus annuus HOM05D003673 ORTHO05D004764 5.4e-128 461.8 428 56.1
Actinidia24401 Actinidia chinensis HOM05D003673 ORTHO05D004764 3.0e-126 456.1 430 56.7
CBR_g41741 Chara braunii HOM05D003673 ORTHO05D004764 1.1e-125 454.1 441 52.2
CBR_g8495 Chara braunii HOM05D003673 ORTHO05D004764 1.5e-125 453.8 441 52.2
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis HOM05D003673 ORTHO05D004764 1.9e-125 453.4 386 58.8
CBR_g46667 Chara braunii HOM05D003673 ORTHO05D004764 9.5e-125 451.1 443 52.1
Thecc.01G168800 Theobroma cacao HOM05D003673 ORTHO05D004764 4.4e-122 442.2 433 54.7
PRCOL_00001771 Prasinoderma coloniale HOM05D003673 ORTHO05D004764 5.4e-120 435.3 421 53.9
MCO11G070 Micromonas commoda HOM05D003673 ORTHO05D004764 2.6e-114 416.4 443 50.6
Potri.005G205200 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.3e-110 404.1 417 54.0
Lj8C8T1 Lonicera japonica HOM05D003673 ORTHO05D004764 3.0e-110 402.9 332 62.7
SMO118G0557 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 5.1e-110 402.1 423 48.7
ECA233G6193 Erigeron canadensis HOM05D003673 ORTHO05D004764 6.6e-110 401.7 388 53.9
Glyma.02G284600 Glycine max HOM05D003673 ORTHO05D004764 7.6e-106 388.3 343 58.0
TPR.G25540 Trifolium pratense HOM05D003673 ORTHO05D004764 7.6e-106 388.3 397 52.4
Zm00001eb304950 Zea mays HOM05D003673 ORTHO05D004764 1.1e-104 384.4 411 47.9
Solyc05g041200.4 Solanum lycopersicum HOM05D003673 ORTHO05D004764 6.4e-97 358.6 308 61.0
Medtr5g090980 Medicago truncatula HOM05D003673 ORTHO05D004764 4.2e-96 355.9 359 53.8
ATR0763G164 Amborella trichopoda HOM05D003673 ORTHO05D004764 9.3e-96 354.8 285 63.9
MD09G1148400 Malus domestica HOM05D003673 ORTHO05D004764 6.7e-94 348.6 383 52.2
Os02g0168100 Oryza sativa ssp. japonica HOM05D003673 ORTHO05D004764 8.7e-94 348.2 228 71.1
Ah.02g114000 Amaranthus hybridus HOM05D003673 ORTHO05D004764 1.9e-93 347.1 372 49.2
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea HOM05D003673 ORTHO05D004764 7.1e-88 328.6 361 52.9
MD13G1156600 Malus domestica HOM05D003673 ORTHO05D004764 2.0e-82 310.5 375 45.3
Atru.chr6.2046 Acer truncatum HOM05D003673 ORTHO05D004764 2.1e-79 300.4 165 85.5
AUR62016194 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.2e-72 276.2 298 49.7
AUR62039301 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.8e-60 236.1 205 56.1
AUR62044533 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.8e-60 236.1 205 56.1
Thecc.01G169100 Theobroma cacao HOM05D003673 ORTHO05D004764 1.1e-59 235.0 245 52.7
AUR62035118 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.1e-59 233.0 200 57.0
AUR62039293 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.1e-59 233.0 200 57.0
AUR62039297 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.1e-59 233.0 200 57.0
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea HOM05D003673 ORTHO05D004764 5.0e-57 226.1 244 52.5
Cc05_g01440 Coffea canephora HOM05D003673 ORTHO05D004764 3.8e-49 199.9 105 87.6
AUR62035117 Chenopodium quinoa HOM05D003673 ORTHO05D017143 1.0e-46 191.8 212 48.6
AUR62039294 Chenopodium quinoa HOM05D003673 ORTHO05D017143 1.0e-46 191.8 212 48.6
AUR62039298 Chenopodium quinoa HOM05D003673 ORTHO05D017143 1.0e-46 191.8 212 48.6
GSVIVG01020837001 Vitis vinifera HOM05D003673 ORTHO05D004764 1.8e-46 191.0 104 83.7
AUR62044532 Chenopodium quinoa HOM05D003673 ORTHO05D017143 1.5e-37 161.4 133 59.4
FvH4_5g31130 Fragaria vesca HOM05D003673 ORTHO05D004764 3.1e-35 153.7 89 80.9
FAN18G0200 Fragaria x ananassa HOM05D003673 ORTHO05D004764 3.5e-34 150.2 89 78.7
Atru.chr6.2045 Acer truncatum HOM05D003673 ORTHO05D017143 8.6e-33 145.6 95 68.4
Cfa023357 Carpinus fangiana HOM05D003673 ORTHO05D017143 7.2e-32 142.5 89 69.7
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 4.0e-30 136.7 108 59.3
Haze_25279 Corylus avellana HOM05D003673 ORTHO05D004764 2.0e-29 134.4 162 48.8
MD05G1024200 Malus domestica HOM05D003673 ORTHO05D004764 4.4e-29 133.3 76 78.9
ATR0763G191 Amborella trichopoda HOM05D003673 ORTHO05D017143 2.3e-25 120.9 112 54.5
COL.COLO4_38401 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.6e-23 114.8 148 45.9
COL.COLO4_20758 Corchorus olitorius HOM05D003673 ORTHO05D004764 4.4e-21 106.7 71 71.8
GSVIVG01013079001 Vitis vinifera HOM05D003673 ORTHO05D004764 5.7e-21 106.3 64 73.4
TPR.G10161 Trifolium pratense HOM05D003673 ORTHO05D004764 1.7e-20 104.8 52 90.4
CARHR006190 Cardamine hirsuta HOM05D003673 ORTHO05D004764 2.2e-20 104.4 52 90.4
Dinv21956 Davidia involucrata HOM05D003673 ORTHO05D004764 1.6e-15 88.2 97 52.6
AUR62039302 Chenopodium quinoa HOM05D003673 ORTHO05D017143 1.8e-14 84.7 120 42.5
Lj8C8T3 Lonicera japonica HOM05D003673 ORTHO05D004764 2.2e-12 77.8 38 92.1
COL.COLO4_19675 Corchorus olitorius HOM05D003673 ORTHO05D163473 1.6e-10 71.6 44 72.7
FAN21G3810 Fragaria x ananassa HOM05D003673 ORTHO05D025527 9.5e-08 62.4 138 32.6
MD05G1024100 Malus domestica HOM05D003673 ORTHO05D017143 1.2e-07 62.0 52 51.9
FAN18G2996 Fragaria x ananassa HOM05D003673 ORTHO05D025527 1.1e-06 58.9 138 31.9


User provided reference genes

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