Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5403 Papaver somniferum HOM05D010434 ORTHO05D012099 5.0e-279 963.8 473 100.0
PSO541G0642 Papaver somniferum HOM05D010434 ORTHO05D012099 2.0e-240 835.5 434 94.5
PSO541G6407 Papaver somniferum HOM05D010434 ORTHO05D012099 6.9e-196 687.6 482 75.5
PSO675G5043 Papaver somniferum HOM05D010434 ORTHO05D012099 3.8e-170 602.1 497 66.4
PSO675G1207 Papaver somniferum HOM05D010434 ORTHO05D012099 1.4e-169 600.1 497 66.2
PSO675G4518 Papaver somniferum HOM05D010434 ORTHO05D012099 5.9e-163 578.2 408 75.7
PSO675G7191 Papaver somniferum HOM05D010434 ORTHO05D012099 3.0e-151 539.3 472 63.8
PSO675G8523 Papaver somniferum HOM05D010434 ORTHO05D012099 3.5e-115 419.5 361 63.4
PSO675G8751 Papaver somniferum HOM05D010434 ORTHO05D012099 6.4e-109 398.7 503 49.9
PSO541G1570 Papaver somniferum HOM05D010434 ORTHO05D012099 1.5e-97 360.9 335 61.2
PSO675G7526 Papaver somniferum HOM05D010434 ORTHO05D012099 9.0e-95 351.7 494 46.0
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 9.0e-71 271.9 472 40.9
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.7e-69 267.7 474 40.3
PSO541G3677 Papaver somniferum HOM05D010434 ORTHO05D012099 2.8e-64 250.4 472 38.6
PSO017G6479 Papaver somniferum HOM05D010434 ORTHO05D012099 1.2e-59 235.0 224 58.9
PSO541G3427 Papaver somniferum HOM05D010434 ORTHO05D012099 4.6e-59 233.0 258 57.0
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.1e-47 195.3 514 30.4
PSO407G0222 Papaver somniferum HOM05D010434 ORTHO05D012099 1.4e-47 194.9 246 50.4
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 4.8e-40 169.9 398 31.9
PSO541G0487 Papaver somniferum HOM05D010434 ORTHO05D012099 4.8e-40 169.9 240 45.0
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 4.8e-40 169.9 487 29.8
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 5.9e-38 162.9 484 27.9
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.1e-36 158.7 477 27.9
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 3.6e-35 153.7 470 28.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 4.0e-34 150.2 488 26.4
PSO541G1395 Papaver somniferum HOM05D010434 ORTHO05D012099 6.7e-34 149.4 195 48.2
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 4.4e-33 146.7 486 27.8
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 5.7e-33 146.4 482 27.0
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 7.5e-33 146.0 488 26.6
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 4.8e-32 143.3 490 26.3
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 6.3e-32 142.9 525 27.0
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 6.3e-32 142.9 486 26.5
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.1e-31 142.1 409 30.3
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 1.8e-31 141.4 479 26.3
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 1.8e-31 141.4 487 27.5
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 2.7e-30 137.5 512 26.4
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.0e-29 135.6 494 26.5
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.3e-29 135.2 484 25.4
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 1.7e-29 134.8 504 25.6
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 3.8e-29 133.7 494 26.3
PSO832G1385 Papaver somniferum HOM05D010434 ORTHO05D012099 5.0e-29 133.3 284 35.9
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.1e-28 132.1 482 25.5
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 3.2e-28 130.6 477 25.2
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 4.2e-28 130.2 474 26.4
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 2.1e-27 127.9 484 25.0
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.1e-27 127.9 519 25.6
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 3.6e-27 127.1 515 26.0
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 6.1e-27 126.3 403 27.0
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 8.0e-27 125.9 360 27.2
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.8e-26 124.8 481 26.8
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 8.8e-26 122.5 493 26.6
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 3.4e-25 120.6 467 24.8
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 2.2e-24 117.9 393 25.7
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.7e-24 117.1 480 24.0
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 6.3e-24 116.3 490 23.1
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 8.3e-24 115.9 478 24.1
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 8.3e-24 115.9 518 24.3
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.8e-23 114.8 480 23.8
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 3.1e-23 114.0 486 23.9
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.1e-23 114.0 486 23.9
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 7.0e-23 112.8 485 26.2
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 7.0e-23 112.8 432 25.9
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 7.0e-23 112.8 483 24.0
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 7.0e-23 112.8 380 24.5
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 9.1e-23 112.5 421 25.9
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.2e-22 112.1 486 25.5
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 1.2e-22 112.1 485 26.2
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 1.6e-22 111.7 487 26.9
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 1.6e-22 111.7 432 25.9
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 1.6e-22 111.7 446 25.8
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 2.0e-22 111.3 386 25.4
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 3.5e-22 110.5 486 25.5
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 3.5e-22 110.5 486 25.7
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 5.9e-22 109.8 489 24.9
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 5.9e-22 109.8 392 25.0
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 5.9e-22 109.8 414 23.4
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 5.9e-22 109.8 483 23.8
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 7.7e-22 109.4 387 25.1
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 7.7e-22 109.4 497 24.7
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.0e-21 109.0 486 25.5
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.0e-21 109.0 489 24.5
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.0e-21 109.0 433 26.8
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.3e-21 108.6 486 24.9
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 1.7e-21 108.2 423 25.8
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 2.3e-21 107.8 485 24.9
SEGI_39597 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.9e-21 107.5 394 26.4
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 3.8e-21 107.1 491 25.7
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 6.6e-21 106.3 491 24.6
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 8.6e-21 105.9 419 26.3
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 8.6e-21 105.9 391 26.9
SEGI_08864 Sequoiadendron giganteum HOM05D002270 ORTHO05D012099 8.6e-21 105.9 394 25.9
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.5e-20 105.1 388 24.5
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.5e-20 105.1 504 25.4
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 3.3e-20 104.0 490 25.1
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 4.2e-20 103.6 491 22.6
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 5.5e-20 103.2 492 25.0
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 5.5e-20 103.2 490 25.9
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.6e-19 101.7 491 22.2
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 1.6e-19 101.7 472 23.1
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 2.1e-19 101.3 423 25.5
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 4.7e-19 100.1 475 22.1
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 4.7e-19 100.1 501 24.4
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 6.1e-19 99.8 337 26.1
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 8.0e-19 99.4 406 22.9
PSO591G0064 Papaver somniferum HOM05D010434 ORTHO05D012099 1.0e-18 99.0 211 35.5
PSO591G0123 Papaver somniferum HOM05D010434 ORTHO05D012099 1.8e-18 98.2 161 39.8
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 1.8e-18 98.2 383 25.3
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 5.2e-18 96.7 427 24.6
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 4.4e-17 93.6 361 27.1
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 9.8e-17 92.4 488 23.6
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.2e-16 91.3 411 22.9
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 1.4e-15 88.6 395 23.0
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 5.4e-15 86.7 389 22.6
SHI16818 Sapria himalayana HOM05D002270 ORTHO05D012099 1.2e-14 85.5 341 24.3
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.6e-14 85.1 354 25.4
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 2.0e-14 84.7 408 22.5
C05p38590 Brassica napus HOM05D002270 ORTHO05D002866 2.3e-13 81.3 384 26.0
BolC5t32597H Brassica oleracea HOM05D002270 ORTHO05D002866 2.3e-13 81.3 384 26.0
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 2.3e-13 81.3 484 21.9
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 4.7e-11 73.6 321 24.0
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 1.2e-09 68.9 354 24.0
SEGI_33198 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.5e-09 68.6 159 31.4
Nn5g26982 Nelumbo nucifera HOM05D002270 ORTHO05D012099 4.4e-09 67.0 102 38.2
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 2.2e-08 64.7 147 30.6
Rhsim04G0127600 Rhododendron simsii HOM05D002270 ORTHO05D012099 9.2e-07 59.3 117 31.6
Aqoxy6G02934 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 2.7e-06 57.8 89 30.3


User provided reference genes

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