Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 0.0e+00 1344.7 1042 100.0
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 0.0e+00 1317.0 1042 97.6
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.3e-276 956.1 1043 76.2
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 5.1e-268 928.3 1051 74.3
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 9.6e-267 924.1 1059 71.5
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.4e-262 910.2 1043 72.2
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 1.0e-255 887.5 1078 70.1
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.7e-255 886.7 1100 66.4
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 3.8e-255 885.6 1106 65.6
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 2.5e-254 882.9 1045 74.0
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 3.2e-254 882.5 1080 69.8
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 5.5e-254 881.7 1056 68.8
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 7.2e-254 881.3 1059 67.9
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 3.6e-253 879.0 1052 67.6
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 3.6e-253 879.0 1098 66.1
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 1.8e-252 876.7 1044 68.4
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.1e-251 874.0 1040 67.7
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.1e-251 874.0 1040 67.7
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.9e-251 873.2 1047 66.9
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.3e-250 870.5 1043 69.5
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.6e-250 870.2 1113 64.7
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.2e-250 869.8 1075 71.9
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.8e-250 869.4 1039 67.0
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 3.7e-250 869.0 1109 64.8
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 2.4e-249 866.3 1103 65.3
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 5.3e-249 865.1 1109 64.9
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.2e-248 864.0 1055 68.1
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 2.0e-248 863.2 1044 68.4
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 2.6e-248 862.8 1037 67.2
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 4.5e-248 862.1 1125 67.8
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.7e-247 860.1 1057 57.4
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 5.0e-247 858.6 1106 65.4
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 2.5e-246 856.3 1059 65.3
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 5.5e-246 855.1 1050 66.3
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 9.4e-246 854.4 1045 75.4
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 2.1e-245 853.2 1036 66.1
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 3.6e-245 852.4 1036 66.7
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 7.9e-245 851.3 1042 66.4
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.8e-244 850.1 1114 65.1
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.3e-244 849.7 1055 67.6
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 3.9e-244 849.0 1049 66.8
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 5.1e-244 848.6 1055 65.7
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 5.1e-244 848.6 1048 66.1
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 8.8e-244 847.8 1049 65.4
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 8.8e-244 847.8 1046 66.8
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 1.5e-243 847.0 1057 67.1
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 3.7e-242 842.4 1050 64.7
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 2.4e-241 839.7 1043 66.4
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 2.4e-241 839.7 1105 65.5
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 3.1e-241 839.3 1045 65.8
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 2.6e-240 836.3 1038 65.7
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.0e-239 834.3 1103 63.9
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 2.9e-239 832.8 1048 66.3
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 2.9e-239 832.8 1074 68.1
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.9e-239 832.8 1074 68.1
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.1e-238 830.9 1107 63.8
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 3.2e-238 829.3 1038 65.7
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 9.4e-238 827.8 1046 68.1
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 2.7e-237 826.2 1049 62.3
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 3.6e-237 825.9 1079 62.6
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 7.9e-237 824.7 1047 65.4
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 3.9e-236 822.4 1047 63.1
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 2.0e-235 820.1 1059 62.2
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 4.4e-235 818.9 1059 62.2
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 3.7e-234 815.8 1047 62.3
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.4e-233 813.9 1038 65.1
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.8e-233 813.5 1055 59.2
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 2.6e-232 809.7 1080 63.8
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 1.0e-231 807.7 1078 61.1
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.5e-230 803.1 1067 67.9
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 8.0e-229 798.1 1039 64.5
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 5.2e-228 795.4 1039 64.3
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 6.7e-228 795.0 1067 66.9
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 7.5e-227 791.6 1046 64.7
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.3e-226 790.8 1045 64.8
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 2.8e-226 789.6 1127 44.2
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 2.4e-225 786.6 1042 65.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 5.3e-225 785.4 1109 62.7
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.2e-224 784.3 1075 60.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 5.9e-224 781.9 1023 62.3
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 4.2e-222 775.8 1207 45.7
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 7.2e-222 775.0 1054 60.4
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.0e-219 766.9 1042 64.4
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 1.3e-218 764.2 1061 57.7
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.2e-216 757.7 1050 61.6
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 2.3e-215 753.4 1058 59.5
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 2.3e-215 753.4 484 73.3
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 7.2e-214 748.4 1055 63.4
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 3.1e-209 733.0 786 76.8
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 2.3e-207 726.9 487 71.9
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.3e-207 726.9 487 71.0
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.4e-204 717.6 486 70.2
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 2.4e-201 706.8 1035 53.4
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.0e-199 699.9 1039 56.2
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 3.0e-199 699.9 484 70.2
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 2.1e-197 693.7 1043 60.5
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 1.1e-196 691.4 928 71.1
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.4e-196 691.0 1051 60.5
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.9e-191 672.9 793 62.4
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 3.6e-181 639.8 982 57.5
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.6e-176 624.4 482 62.7
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.1e-166 591.7 842 75.1
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 1.3e-157 561.6 915 60.1
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 2.1e-152 544.3 979 53.5
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 2.7e-136 490.7 1038 44.4
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 3.4e-131 473.8 1034 46.2
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 7.7e-131 472.6 441 56.2
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 5.3e-116 423.3 771 65.2
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 7.0e-100 369.8 253 67.2
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 2.3e-95 354.8 537 39.3
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 2.7e-83 314.7 500 42.4
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.7e-82 312.0 302 52.3
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 4.7e-80 303.9 202 71.3
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 8.3e-77 293.1 704 52.8
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 3.0e-66 258.1 458 36.2
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 2.1e-64 251.9 165 73.9
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 8.1e-64 250.0 333 44.7
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 6.4e-61 240.4 345 42.6
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 3.0e-58 231.5 269 49.8
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 6.6e-58 230.3 357 52.9
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.2e-56 226.1 499 35.3
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.6e-49 200.7 155 67.7
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 2.6e-46 191.8 135 71.1
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 7.1e-44 183.7 136 58.1
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 1.3e-42 179.5 99 79.8
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.9e-33 149.1 191 43.5
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 4.3e-33 147.9 130 58.5
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 7.4e-33 147.1 130 58.5
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 9.6e-33 146.7 111 67.6
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.9e-31 140.6 112 66.1
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.8e-29 134.8 93 73.1
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 9.3e-28 130.2 93 71.0
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.5e-27 128.3 74 73.0
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 8.7e-26 123.6 76 78.9
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.4e-23 116.3 93 62.4
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 2.9e-21 108.6 105 59.0
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 9.4e-20 103.6 94 56.4
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 4.1e-15 88.2 129 41.9
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.0e-14 85.9 120 42.5
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.7e-14 84.0 49 77.6
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 7.9e-11 73.9 117 36.8
HanXRQChr06g0176501 Helianthus annuus HOM05D004966 ORTHO05D006199 4.1e-07 61.6 36 77.8
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 4.5e-06 58.2 48 47.9
ATR0030G038 Amborella trichopoda HOM05D047453 ORTHO05D006199 5.9e-06 57.8 73 45.2
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.9e-06 57.8 43 60.5


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