Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 0.0e+00 1166.8 577 100.0
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 0.0e+00 1130.5 589 95.9
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 6.7e-262 907.1 560 80.4
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.2e-260 902.1 556 79.1
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 4.8e-260 901.0 588 75.7
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 4.5e-258 894.4 583 76.5
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 8.5e-257 890.2 560 77.3
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 1.1e-256 889.8 550 79.8
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 7.2e-256 887.1 561 77.2
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.0e-254 883.2 550 78.4
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 1.8e-254 882.5 567 76.7
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 2.3e-254 882.1 549 79.2
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 4.0e-254 881.3 550 78.2
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 5.2e-254 880.9 590 73.6
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 2.6e-253 878.6 551 78.2
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 4.4e-253 877.9 550 77.8
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 2.3e-249 865.5 581 74.5
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 3.8e-249 864.8 588 72.1
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 5.0e-249 864.4 592 72.5
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 5.0e-249 864.4 553 75.4
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 8.6e-249 863.6 550 76.4
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 1.1e-248 863.2 587 71.7
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 1.1e-248 863.2 551 76.2
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 1.5e-248 862.8 587 73.1
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 1.2e-247 859.8 578 73.0
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 2.1e-247 859.0 554 75.3
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 2.8e-247 858.6 583 72.7
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 2.3e-246 855.5 537 77.5
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 3.0e-246 855.1 560 74.6
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 8.8e-246 853.6 592 71.6
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 8.8e-246 853.6 555 74.8
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 8.8e-246 853.6 640 67.8
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 2.6e-245 852.0 588 71.9
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 9.8e-245 850.1 572 72.9
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 9.8e-245 850.1 548 75.5
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 1.3e-244 849.7 550 75.1
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 1.7e-244 849.4 544 76.5
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 3.7e-244 848.2 560 74.1
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 1.1e-243 846.7 559 73.3
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 2.4e-243 845.5 582 72.2
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 2.4e-243 845.5 557 74.1
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 4.1e-243 844.7 579 72.0
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 5.4e-243 844.3 549 75.2
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 9.2e-243 843.6 564 73.6
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 2.0e-242 842.4 573 72.8
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 4.5e-242 841.3 629 68.2
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 2.9e-241 838.6 575 71.8
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 5.0e-241 837.8 546 74.5
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.5e-240 836.3 558 72.6
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 2.5e-240 835.5 558 72.6
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.2e-237 826.6 551 73.3
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 1.2e-237 826.6 581 71.4
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 2.6e-237 825.5 551 72.8
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 9.8e-237 823.5 560 74.6
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 3.5e-234 815.1 542 73.4
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 1.2e-231 806.6 573 68.9
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 2.0e-229 799.3 553 69.3
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 9.8e-229 797.0 553 68.7
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 8.3e-228 793.9 589 65.9
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 1.1e-227 793.5 589 65.7
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 1.4e-227 793.1 589 65.5
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 3.2e-227 792.0 589 65.7
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 3.5e-226 788.5 589 65.5
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 4.6e-226 788.1 544 71.0
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 6.0e-226 787.7 514 78.0
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 7.8e-226 787.3 589 65.7
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 1.0e-225 786.9 589 65.4
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 1.0e-225 786.9 589 65.7
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 1.3e-225 786.6 553 67.8
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 2.3e-225 785.8 559 70.3
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 2.3e-225 785.8 553 69.8
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 5.0e-225 784.6 540 68.9
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 6.2e-223 777.7 590 67.6
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 6.8e-222 774.2 550 67.3
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 1.9e-219 766.1 501 74.5
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 1.6e-218 763.1 539 69.9
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 8.1e-215 750.7 551 68.1
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.4e-214 750.0 559 66.7
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 1.7e-212 743.0 521 71.0
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 2.9e-212 742.3 497 73.8
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 4.9e-212 741.5 575 67.7
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 7.3e-208 727.6 457 77.9
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 8.1e-207 724.2 581 65.2
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.3e-201 706.8 539 67.3
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 4.3e-200 701.8 486 71.8
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 1.8e-198 696.4 488 68.6
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 4.6e-194 681.8 580 63.3
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 3.8e-188 662.1 426 78.2
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 2.5e-184 649.4 544 57.9
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 6.9e-182 641.3 589 59.8
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 7.9e-178 627.9 543 55.8
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 1.9e-168 596.7 547 54.8
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 2.7e-154 549.7 335 79.7
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 2.6e-152 543.1 384 70.3
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 4.4e-152 542.3 518 57.9
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 2.4e-150 536.6 534 54.5
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.2e-149 534.3 319 79.9
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 7.2e-139 498.4 309 76.4
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 4.0e-137 492.7 385 62.9
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 6.3e-135 485.3 345 67.5
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 2.7e-133 479.9 406 62.8
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 2.5e-131 473.4 435 58.4
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 1.4e-126 457.6 572 43.0
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 2.7e-125 453.4 308 72.1
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 3.5e-109 399.8 374 53.5
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 1.1e-91 341.7 380 46.3
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.6e-90 337.8 233 74.2
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 1.4e-89 334.7 206 78.6
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 9.9e-88 328.6 244 66.4
MBI19_g40900_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 2.7e-53 214.2 139 71.2
SEGI_31657 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 1.5e-51 208.4 159 62.9
COL.COLO4_21854 Corchorus olitorius HOM05D002380 ORTHO05D008286 1.1e-49 202.2 118 76.3
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 6.1e-45 186.4 159 60.4
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 1.3e-42 178.7 149 54.4
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 2.4e-41 174.5 99 77.8
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.7e-34 151.8 160 53.8
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 1.5e-30 138.7 85 74.1
SEGI_28059 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.7e-24 117.9 76 71.1
CBR_g12620 Chara braunii HOM05D005350 ORTHO05D008838 5.0e-23 113.6 91 50.5
LjContig00564g0015808 Lotus japonicus HOM05D002380 ORTHO05D008286 1.5e-22 112.1 64 71.9
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 4.4e-19 100.5 73 67.1
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 6.6e-15 86.7 85 43.5
Actinidia09730 Actinidia chinensis HOM05D002380 ORTHO05D008286 9.5e-14 82.8 93 50.5
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 3.0e-12 77.8 55 67.3
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 1.5e-11 75.5 53 67.9
SEGI_40123 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.0e-11 75.1 49 69.4
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 4.9e-10 70.5 83 50.6
CAN.G96.10 Capsicum annuum HOM05D002380 ORTHO05D026288 2.3e-07 61.6 37 73.0
CBR_g8455 Chara braunii HOM05D002380 ORTHO05D008286 5.0e-07 60.5 60 50.0


User provided reference genes

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