Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4314 Papaver somniferum HOM05D007979 ORTHO05D008897 2.1e-88 328.9 159 100.0
PSO801G0486 Papaver somniferum HOM05D007979 ORTHO05D008897 1.7e-74 282.7 159 86.2
PSO761G0359 Papaver somniferum HOM05D007979 ORTHO05D008897 6.1e-72 274.2 158 82.3
PSO478G2646 Papaver somniferum HOM05D007979 ORTHO05D008897 5.2e-71 271.2 160 82.5
PSO824G0080 Papaver somniferum HOM05D007979 ORTHO05D008897 2.2e-69 265.8 156 80.8
PSO017G2467 Papaver somniferum HOM05D007979 ORTHO05D008897 1.8e-68 262.7 159 78.6
PSO210G0381 Papaver somniferum HOM05D007979 ORTHO05D008897 1.8e-68 262.7 156 82.7
PSO017G6947 Papaver somniferum HOM05D007979 ORTHO05D008897 7.0e-68 260.8 156 80.1
PSO339G4256 Papaver somniferum HOM05D007979 ORTHO05D008897 9.1e-68 260.4 159 79.2
PSO675G5504 Papaver somniferum HOM05D007979 ORTHO05D008897 9.1e-68 260.4 151 84.8
PSO170G2889 Papaver somniferum HOM05D007979 ORTHO05D008897 2.7e-67 258.8 156 80.8
PSO675G8252 Papaver somniferum HOM05D000003 ORTHO05D008897 7.7e-67 257.3 156 78.8
PSO675G6329 Papaver somniferum HOM05D007979 ORTHO05D008897 2.9e-66 255.4 155 81.3
PSO017G6016 Papaver somniferum HOM05D007979 ORTHO05D008897 5.0e-66 254.6 156 80.1
PSO357G0645 Papaver somniferum HOM05D007979 ORTHO05D008897 1.1e-65 253.4 156 76.9
PSO339G3875 Papaver somniferum HOM05D007979 ORTHO05D008897 2.5e-65 252.3 159 76.1
PSO675G4940 Papaver somniferum HOM05D007979 ORTHO05D008897 5.5e-65 251.1 159 76.1
PSO170G1159 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-64 250.0 156 76.9
PSO478G1683 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-64 250.0 156 76.9
PSO832G1876 Papaver somniferum HOM05D007979 ORTHO05D008897 2.1e-64 249.2 155 77.4
PSO210G5156 Papaver somniferum HOM05D007979 ORTHO05D008897 1.4e-63 246.5 156 77.6
PSO339G3221 Papaver somniferum HOM05D007979 ORTHO05D008897 1.4e-63 246.5 155 73.5
PSO210G4325 Papaver somniferum HOM05D007979 ORTHO05D008897 1.8e-63 246.1 156 76.3
PSO170G4211 Papaver somniferum HOM05D007979 ORTHO05D008897 3.0e-63 245.4 152 75.7
PSO017G1742 Papaver somniferum HOM05D007979 ORTHO05D008897 2.0e-62 242.7 155 77.4
PSO675G6649 Papaver somniferum HOM05D007979 ORTHO05D008897 2.6e-62 242.3 153 76.5
PSO063G5374 Papaver somniferum HOM05D007979 ORTHO05D008897 5.7e-62 241.1 156 73.1
PSO339G4730 Papaver somniferum HOM05D007979 ORTHO05D008897 5.7e-62 241.1 155 74.8
PSO063G1625 Papaver somniferum HOM05D007979 ORTHO05D008897 2.2e-61 239.2 148 77.0
PSO832G3588 Papaver somniferum HOM05D000003 ORTHO05D008897 2.8e-61 238.8 156 76.3
PSO017G5341 Papaver somniferum HOM05D000003 ORTHO05D008897 8.3e-61 237.3 156 71.2
PSO210G4702 Papaver somniferum HOM05D000003 ORTHO05D008897 5.9e-59 231.1 138 79.7
PSO170G5060 Papaver somniferum HOM05D007979 ORTHO05D008897 7.7e-59 230.7 156 68.6
PSO170G0252 Papaver somniferum HOM05D007979 ORTHO05D008897 2.3e-58 229.2 156 67.9
PSO675G5058 Papaver somniferum HOM05D007979 ORTHO05D008897 3.8e-58 228.4 156 70.5
PSO210G3341 Papaver somniferum HOM05D007979 ORTHO05D008897 5.0e-58 228.0 138 79.0
PSO339G4879 Papaver somniferum HOM05D007979 ORTHO05D008897 6.6e-58 227.6 156 67.3
PSO210G2752 Papaver somniferum HOM05D007979 ORTHO05D008897 2.5e-57 225.7 152 68.4
PSO782G1141 Papaver somniferum HOM05D000003 ORTHO05D008897 2.5e-57 225.7 154 69.5
PSO067G0070 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-56 223.0 155 67.7
PSO339G1461 Papaver somniferum HOM05D000003 ORTHO05D008897 1.6e-56 223.0 152 68.4
PSO384G2932 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-56 223.0 142 78.9
PSO210G4965 Papaver somniferum HOM05D000003 ORTHO05D008897 2.3e-55 219.2 146 68.5
PSO210G4179 Papaver somniferum HOM05D007979 ORTHO05D008897 3.0e-55 218.8 156 66.0
PSO339G3527 Papaver somniferum HOM05D000003 ORTHO05D008897 1.2e-54 216.9 142 73.2
PSO754G0062 Papaver somniferum HOM05D000003 ORTHO05D008897 1.2e-54 216.9 152 66.4
PSO832G2489 Papaver somniferum HOM05D000003 ORTHO05D008897 4.4e-54 214.9 156 64.1
PSO478G5116 Papaver somniferum HOM05D007979 ORTHO05D008897 7.5e-54 214.2 156 66.0
PSO782G4239 Papaver somniferum HOM05D007979 ORTHO05D008897 2.2e-53 212.6 159 67.3
PSO724G0871 Papaver somniferum HOM05D000003 ORTHO05D008897 4.9e-53 211.5 156 62.8
PSO801G0711 Papaver somniferum HOM05D007979 ORTHO05D008897 4.9e-53 211.5 156 64.1
PSO017G6421 Papaver somniferum HOM05D007979 ORTHO05D008897 6.3e-53 211.1 127 81.9
PSO017G3465 Papaver somniferum HOM05D007979 ORTHO05D008897 8.3e-53 210.7 156 64.1
PSO210G7093 Papaver somniferum HOM05D000003 ORTHO05D008897 8.3e-53 210.7 125 83.2
PSO782G1026 Papaver somniferum HOM05D007979 ORTHO05D008897 8.3e-53 210.7 159 66.7
PSO541G0739 Papaver somniferum HOM05D007979 ORTHO05D008897 3.2e-52 208.8 156 62.8
PSO541G3839 Papaver somniferum HOM05D007979 ORTHO05D008897 9.2e-52 207.2 132 75.0
PSO384G0920 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-51 206.5 148 65.5
PSO541G5765 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-51 206.5 138 73.9
PSO170G2725 Papaver somniferum HOM05D007979 ORTHO05D008897 4.6e-51 204.9 153 62.7
PSO541G4066 Papaver somniferum HOM05D007979 ORTHO05D008897 4.6e-51 204.9 131 77.1
PSO063G0850 Papaver somniferum HOM05D007979 ORTHO05D008897 3.3e-49 198.7 134 71.6
PSO782G3355 Papaver somniferum HOM05D007979 ORTHO05D008897 4.7e-48 194.9 136 70.6
PSO832G0628 Papaver somniferum HOM05D000003 ORTHO05D008897 4.0e-47 191.8 128 71.1
PSO532G0074 Papaver somniferum HOM05D007979 ORTHO05D008897 4.4e-46 188.3 137 65.7
PSO017G4348 Papaver somniferum HOM05D007979 ORTHO05D008897 5.8e-46 188.0 131 67.9
PSO135G0902 Papaver somniferum HOM05D000003 ORTHO05D008897 4.9e-45 184.9 132 71.2
PSO339G3764 Papaver somniferum HOM05D007979 ORTHO05D008897 6.6e-42 174.5 126 66.7
PSO063G1555 Papaver somniferum HOM05D007979 ORTHO05D008897 8.6e-42 174.1 155 58.1
PSO170G0727 Papaver somniferum HOM05D007979 ORTHO05D008897 2.9e-37 159.1 97 81.4
PSO017G1412 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-36 156.8 157 51.0
PSO210G6716 Papaver somniferum HOM05D007979 ORTHO05D008897 1.9e-36 156.4 116 66.4
PSO339G0335 Papaver somniferum HOM05D007979 ORTHO05D008897 1.9e-36 156.4 103 71.8
PSO700G0154 Papaver somniferum HOM05D007979 ORTHO05D008897 1.3e-34 150.2 104 70.2
PSO782G3767 Papaver somniferum HOM05D000003 ORTHO05D008897 1.1e-33 147.1 93 78.5
PSO801G0709 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-31 138.3 115 63.5
PSO700G0281 Papaver somniferum HOM05D007979 ORTHO05D008897 4.4e-30 135.2 108 60.2
PSO063G3744 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-30 134.8 91 71.4
PSO782G5668 Papaver somniferum HOM05D007979 ORTHO05D008897 1.9e-28 129.8 89 74.2
PSO170G1528 Papaver somniferum HOM05D007979 ORTHO05D008897 1.7e-26 123.2 74 78.4
PSO063G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-24 117.1 89 68.5
PSO210G2896 Papaver somniferum HOM05D007979 ORTHO05D008897 4.7e-24 115.2 97 57.7
PSO478G2897 Papaver somniferum HOM05D007979 ORTHO05D008897 3.2e-20 102.4 76 65.8
PSO210G6702 Papaver somniferum HOM05D007979 ORTHO05D008897 5.4e-20 101.7 152 34.9
PSO339G5548 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-19 100.1 79 62.0
PSO210G0775 Papaver somniferum HOM05D007979 ORTHO05D008897 4.8e-16 88.6 136 34.6
PSO339G1991 Papaver somniferum HOM05D007979 ORTHO05D008897 1.1e-15 87.4 139 31.7
PSO541G5834 Papaver somniferum HOM05D007979 ORTHO05D008897 2.4e-15 86.3 55 78.2
PSO675G3290 Papaver somniferum HOM05D007979 ORTHO05D008897 3.1e-15 85.9 55 72.7
PSO478G3564 Papaver somniferum HOM05D000003 ORTHO05D008897 4.4e-14 82.0 42 81.0
PSO674G0111 Papaver somniferum HOM05D007979 ORTHO05D008897 1.1e-12 77.4 55 67.3
Aqoxy2G02194 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.9e-12 76.6 153 31.4
PSO210G6775 Papaver somniferum HOM05D007979 ORTHO05D008897 5.4e-12 75.1 37 83.8
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 7.1e-12 74.7 163 31.9
Prupe.2G133200 Prunus persica HOM05D027201 ORTHO05D008897 2.7e-11 72.8 163 29.4
PSO063G7628 Papaver somniferum HOM05D000003 ORTHO05D008897 3.5e-11 72.4 51 62.7
PSO782G1760 Papaver somniferum HOM05D000003 ORTHO05D008897 3.5e-11 72.4 33 90.9
Aqoxy1G02620 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.6e-11 72.0 136 32.4
Aqoxy1G03074 Aquilegia oxysepala HOM05D000068 ORTHO05D008897 1.0e-10 70.9 136 30.9
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 1.0e-10 70.9 156 30.8
PSO170G5786 Papaver somniferum HOM05D007979 ORTHO05D008897 1.0e-10 70.9 51 66.7
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 1.3e-10 70.5 148 36.5
Aqoxy4G01791 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.3e-10 69.7 155 29.7
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 3.0e-10 69.3 136 31.6
QL11p039844 Quercus lobata HOM05D000003 ORTHO05D011877 5.1e-10 68.6 149 35.6
RcHm_v2.0_Chr5g0016681 Rosa chinensis HOM05D000003 ORTHO05D000004 5.1e-10 68.6 156 28.8
Ah.07g198050 Amaranthus hybridus HOM05D000003 ORTHO05D008897 8.7e-10 67.8 131 31.3
Aqoxy7G01667 Aquilegia oxysepala HOM05D009330 ORTHO05D001026 1.5e-09 67.0 148 27.7
RcHm_v2.0_Chr5g0012401 Rosa chinensis HOM05D000003 ORTHO05D010713 1.5e-09 67.0 147 34.0
RcHm_v2.0_Chr7g0229351 Rosa chinensis HOM05D009322 ORTHO05D010713 1.5e-09 67.0 141 31.9
PSO478G1629 Papaver somniferum HOM05D000003 ORTHO05D000651 1.9e-09 66.6 32 81.2
PSO339G2341 Papaver somniferum HOM05D000003 ORTHO05D008897 2.5e-09 66.2 42 73.8
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 5.6e-09 65.1 147 33.3
PSO170G4716 Papaver somniferum HOM05D000003 ORTHO05D001026 7.3e-09 64.7 157 26.1
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 9.6e-09 64.3 144 30.6
PSO541G4893 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-08 63.9 37 81.1
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-08 63.2 143 32.2
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.1e-08 63.2 144 30.6
PSO302G0021 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-08 63.2 157 26.1
Lj4C754G7 Lonicera japonica HOM05D000003 ORTHO05D000167 3.6e-08 62.4 156 28.8
MD08G1205700 Malus domestica HOM05D000003 ORTHO05D000004 3.6e-08 62.4 129 34.1
Ah.03g146990 Amaranthus hybridus HOM05D000003 ORTHO05D008897 4.8e-08 62.0 93 39.8
PSO170G1352 Papaver somniferum HOM05D000003 ORTHO05D001026 6.2e-08 61.6 159 27.0
PSO339G2736 Papaver somniferum HOM05D003407 ORTHO05D001026 6.2e-08 61.6 137 29.2
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 1.1e-07 60.8 129 34.9
PSO063G0794 Papaver somniferum HOM05D000003 ORTHO05D001026 1.1e-07 60.8 133 33.1
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 1.1e-07 60.8 129 35.7
Prupe.3G133900 Prunus persica HOM05D000003 ORTHO05D000167 1.8e-07 60.1 158 29.7
Lj3g0000535 Lotus japonicus HOM05D000003 ORTHO05D007254 3.1e-07 59.3 155 29.7
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 3.1e-07 59.3 157 29.9
Aqoxy2G01371 Aquilegia oxysepala HOM05D009330 ORTHO05D001026 4.0e-07 58.9 136 27.2
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 4.0e-07 58.9 132 33.3
Lj4g0020141 Lotus japonicus HOM05D000003 ORTHO05D000126 4.0e-07 58.9 132 33.3
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 4.0e-07 58.9 158 30.4
Aqoxy5G02730 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 5.3e-07 58.5 151 26.5
FvH4_4g06602 Fragaria vesca HOM05D009322 ORTHO05D010713 5.3e-07 58.5 146 28.8
PSO541G1484 Papaver somniferum HOM05D007979 ORTHO05D008897 5.3e-07 58.5 106 33.0
Sed0013469 Sechium edule HOM05D000003 ORTHO05D000167 5.3e-07 58.5 149 28.9
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 6.9e-07 58.2 150 32.0
Aqoxy7G02473 Aquilegia oxysepala HOM05D014518 ORTHO05D008897 6.9e-07 58.2 136 30.1
Ah.11g040540 Amaranthus hybridus HOM05D000003 ORTHO05D008897 9.0e-07 57.8 128 30.5
vmacro21925 Vaccinium macrocarpon HOM05D001878 ORTHO05D001737 9.0e-07 57.8 157 30.6
PSO384G0532 Papaver somniferum HOM05D000003 ORTHO05D001026 1.2e-06 57.4 155 23.2
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-06 57.0 131 35.9
BcaC03g16450 Brassica carinata HOM05D000003 ORTHO05D004851 2.0e-06 56.6 160 27.5
PSO675G8709 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-06 56.6 145 26.9
RcHm_v2.0_Chr7g0226691 Rosa chinensis HOM05D009383 ORTHO05D011656 2.0e-06 56.6 157 25.5
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-06 56.2 111 35.1
AUR62005037 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.6e-06 56.2 129 32.6
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 2.6e-06 56.2 147 32.0
Ah.12g061120 Amaranthus hybridus HOM05D000003 ORTHO05D000167 3.4e-06 55.8 152 30.3
PSO832G4055 Papaver somniferum HOM05D000003 ORTHO05D001026 3.4e-06 55.8 152 25.7
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 4.5e-06 55.5 150 29.3
PSO675G0069 Papaver somniferum HOM05D000003 ORTHO05D001026 4.5e-06 55.5 130 27.7
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 4.5e-06 55.5 137 29.9
Sed0006726 Sechium edule HOM05D000003 ORTHO05D000167 4.5e-06 55.5 158 29.7
Aqoxy4G01627 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.8e-06 55.1 87 35.6
Lj1g0005496 Lotus japonicus HOM05D000003 ORTHO05D007254 5.8e-06 55.1 156 31.4
PSO208G0001 Papaver somniferum HOM05D000003 ORTHO05D001026 5.8e-06 55.1 142 26.1
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 5.8e-06 55.1 128 30.5
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 7.6e-06 54.7 142 28.9
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 7.6e-06 54.7 145 26.9
PSO832G0507 Papaver somniferum HOM05D000003 ORTHO05D001026 7.6e-06 54.7 138 24.6
Sed0016697 Sechium edule HOM05D000003 ORTHO05D000167 7.6e-06 54.7 146 30.1
Atru.chr4.152 Acer truncatum HOM05D000003 ORTHO05D000167 9.9e-06 54.3 126 33.3
Ah.16g108850 Amaranthus hybridus HOM05D000003 ORTHO05D006737 9.9e-06 54.3 137 29.9
PSO675G6735 Papaver somniferum HOM05D000003 ORTHO05D001026 9.9e-06 54.3 157 25.5


User provided reference genes

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