Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3559 Papaver somniferum HOM05D003018 ORTHO05D003402 8.7e-105 383.6 193 100.0
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 1.2e-45 187.2 187 62.0
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 1.6e-45 186.8 187 62.0
CsaV3_5G000150 Cucumis sativus L. HOM05D003018 ORTHO05D003402 3.6e-42 175.6 188 54.3
MELO3C005915.2 Cucumis melo HOM05D003018 ORTHO05D003402 1.2e-40 170.6 186 54.8
Duzib084G0455 Durio zibethinus HOM05D003018 ORTHO05D003402 7.5e-40 167.9 182 54.4
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 9.8e-40 167.5 189 54.5
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 1.3e-39 167.2 188 53.2
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 1.3e-39 167.2 183 54.6
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 2.2e-39 166.4 180 55.0
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 2.8e-39 166.0 179 53.1
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 2.8e-39 166.0 188 52.1
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 3.7e-39 165.6 187 52.9
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 4.9e-39 165.2 187 52.9
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 4.9e-39 165.2 182 51.6
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 6.3e-39 164.9 180 53.3
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 1.1e-38 164.1 190 53.7
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 1.4e-38 163.7 188 50.5
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 1.4e-38 163.7 182 52.2
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 1.8e-38 163.3 179 52.0
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 1.8e-38 163.3 188 51.6
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 2.4e-38 162.9 183 53.0
ECA232G4756 Erigeron canadensis HOM05D003018 ORTHO05D003402 3.1e-38 162.5 191 51.3
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 3.1e-38 162.5 184 53.3
Sed0009908 Sechium edule HOM05D003018 ORTHO05D003402 3.1e-38 162.5 188 51.1
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 4.1e-38 162.2 179 52.5
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 4.1e-38 162.2 183 53.0
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 4.1e-38 162.2 183 53.0
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 7.0e-38 161.4 182 52.2
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 9.1e-38 161.0 182 52.7
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 9.1e-38 161.0 182 52.7
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 1.2e-37 160.6 179 50.3
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 1.6e-37 160.2 183 53.0
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.6e-37 160.2 182 52.7
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.6e-37 160.2 182 52.7
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 1.6e-37 160.2 181 51.9
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 2.0e-37 159.8 180 51.7
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.0e-37 159.8 182 52.2
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 2.0e-37 159.8 182 52.7
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 3.5e-37 159.1 182 51.1
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 7.7e-37 157.9 182 52.2
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 1.0e-36 157.5 184 49.5
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 1.0e-36 157.5 186 50.5
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 1.0e-36 157.5 188 50.0
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 1.0e-36 157.5 179 52.0
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 1.3e-36 157.1 179 52.0
Lj1g0024936 Lotus japonicus HOM05D003018 ORTHO05D003402 1.3e-36 157.1 186 48.9
CDE02G1646 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 1.7e-36 156.8 182 50.5
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 1.7e-36 156.8 182 50.5
Sed0018717 Sechium edule HOM05D003018 ORTHO05D003402 1.7e-36 156.8 180 51.7
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 1.7e-36 156.8 179 50.8
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 2.9e-36 156.0 179 51.4
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 3.8e-36 155.6 182 51.1
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 5.0e-36 155.2 184 52.2
SalBow4G0431 Salvia bowleyana HOM05D003018 ORTHO05D003402 5.0e-36 155.2 180 50.6
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 1.1e-35 154.1 183 50.3
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 1.9e-35 153.3 179 49.7
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 1.9e-35 153.3 179 49.7
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 1.9e-35 153.3 188 50.5
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.9e-35 153.3 184 48.4
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 2.5e-35 152.9 182 48.9
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 3.3e-35 152.5 184 48.9
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 5.5e-35 151.8 189 47.6
Lsat_1_v5_gn_2_135421 Lactuca sativa HOM05D003018 ORTHO05D003402 7.2e-35 151.4 185 49.2
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 9.5e-35 151.0 179 50.8
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 9.5e-35 151.0 179 50.8
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 1.2e-34 150.6 185 47.0
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.2e-34 150.6 183 49.2
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 2.1e-34 149.8 191 46.6
Sabra15G0000400 Salix brachista HOM05D003018 ORTHO05D003402 2.1e-34 149.8 184 48.9
Lsat_1_v5_gn_8_4220 Lactuca sativa HOM05D003018 ORTHO05D003402 3.6e-34 149.1 173 49.7
Gohir.A11G017100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 4.7e-34 148.7 183 49.7
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 4.7e-34 148.7 180 49.4
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 4.7e-34 148.7 179 49.2
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 2.3e-33 146.4 179 46.9
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.3e-33 146.4 186 46.8
FvH4_7g33330 Fragaria vesca HOM05D003018 ORTHO05D003402 8.9e-33 144.4 189 45.5
FAN10G3922 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.2e-32 144.1 189 44.4
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 1.2e-32 144.1 178 49.4
FAN03G3459 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.5e-32 143.7 189 44.4
FAN01G2324 Fragaria x ananassa HOM05D003018 ORTHO05D003402 2.0e-32 143.3 189 45.0
FAN10G1538 Fragaria x ananassa HOM05D003018 ORTHO05D003402 3.4e-32 142.5 189 43.9
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 3.4e-32 142.5 179 47.5
COL.COLO4_14400 Corchorus olitorius HOM05D003018 ORTHO05D003402 4.4e-32 142.1 204 44.6
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 9.8e-32 141.0 183 48.1
Gorai.007G017700 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.3e-31 140.6 171 47.4
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 1.3e-31 140.6 188 45.2
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 2.2e-31 139.8 183 48.6
AUR62028118 Chenopodium quinoa HOM05D003018 ORTHO05D003402 6.3e-31 138.3 179 46.4
AUR62005947 Chenopodium quinoa HOM05D003018 ORTHO05D003402 1.1e-30 137.5 179 45.8
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 5.4e-30 135.2 180 48.3
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 7.0e-30 134.8 184 44.6
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 1.6e-29 133.7 185 42.7
HanXRQChr15g0497021 Helianthus annuus HOM05D003018 ORTHO05D003402 3.5e-29 132.5 160 48.1
TPR.G35918 Trifolium pratense HOM05D003018 ORTHO05D003402 3.5e-29 132.5 184 45.7
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 2.9e-28 129.4 186 43.0
Haze_00335 Corylus avellana HOM05D003018 ORTHO05D003402 1.5e-27 127.1 202 42.6
Lsat_1_v5_gn_2_3400 Lactuca sativa HOM05D003018 ORTHO05D003402 5.6e-27 125.2 170 44.7
Gohir.A09G187100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 8.0e-26 121.3 150 48.7
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 1.0e-25 120.9 181 42.0
EL10Ac3g05130 Beta vulgaris HOM05D003018 ORTHO05D003402 1.4e-25 120.6 178 42.1
CiPaw.05G208700 Carya illinoinensis HOM05D003018 ORTHO05D003402 1.8e-25 120.2 180 40.0
Sc19g0000360 Simmondsia chinensis HOM05D003018 ORTHO05D003402 4.0e-25 119.0 206 38.8
Mapoly0083s0018 Marchantia polymorpha HOM05D003018 ORTHO05D003402 1.5e-24 117.1 179 40.2
GSVIVG01038683001 Vitis vinifera HOM05D003018 ORTHO05D003402 1.5e-24 117.1 105 60.0
Zm00001eb084410 Zea mays HOM05D003018 ORTHO05D003402 3.4e-24 115.9 176 39.8
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 4.4e-24 115.5 163 40.5
Psat5g071120 Pisum sativum HOM05D003018 ORTHO05D003402 9.8e-24 114.4 133 49.6
ClCG01G000020 Citrullus lanatus HOM05D003018 ORTHO05D003402 2.9e-23 112.8 128 50.8
DCAR_010557 Daucus carota HOM05D003018 ORTHO05D003402 6.4e-23 111.7 97 61.9
AagrBONN_evm.TU.Sc2ySwM_344.126 Anthoceros agrestis HOM05D003018 ORTHO05D003402 8.3e-23 111.3 162 41.4
AL6G36250 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 1.1e-22 110.9 179 39.1
AT5G24650 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 1.1e-22 110.9 179 38.5
Carub.0006s2250 Capsella rubella HOM05D003018 ORTHO05D003402 1.1e-22 110.9 179 39.1
Sp2g22740 Schrenkiella parvula HOM05D003018 ORTHO05D003402 1.4e-22 110.5 179 38.5
BcaNung02005 Brassica carinata HOM05D003018 ORTHO05D003402 1.9e-22 110.2 179 38.5
C07p43070 Brassica napus HOM05D003018 ORTHO05D003402 1.9e-22 110.2 179 38.5
BolC7t44834H Brassica oleracea HOM05D003018 ORTHO05D003402 1.9e-22 110.2 179 38.5
Os04g0405100 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 3.2e-22 109.4 179 40.2
THA.LOC104798993 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 4.1e-22 109.0 179 39.1
A06p35470 Brassica napus HOM05D003018 ORTHO05D003402 5.4e-22 108.6 179 38.5
BraA06t26470Z Brassica rapa HOM05D003018 ORTHO05D003402 5.4e-22 108.6 179 38.5
Cc02_g00590 Coffea canephora HOM05D003018 ORTHO05D003402 5.4e-22 108.6 105 58.1
Thhalv10004788m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 7.0e-22 108.2 179 38.0
THA.LOC104814958 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 2.7e-21 106.3 179 38.0
Zm00001eb181270 Zea mays HOM05D003018 ORTHO05D003402 2.7e-21 106.3 179 37.4
Aa31LG11G3900 Aethionema arabicum HOM05D003018 ORTHO05D003402 6.0e-21 105.1 179 36.9
CARHR188810 Cardamine hirsuta HOM05D003018 ORTHO05D003402 1.7e-20 103.6 179 36.3
SMO356G0102 Selaginella moellendorffii HOM05D003018 ORTHO05D003402 5.0e-20 102.1 173 37.6
CARHR158570 Cardamine hirsuta HOM05D003018 ORTHO05D003402 6.6e-20 101.7 179 37.4
Lalb_Chr08g0239411 Lupinus albus HOM05D003018 ORTHO05D003402 1.1e-19 100.9 121 49.6
unitig_52.g16865 Utricularia gibba HOM05D003018 ORTHO05D003402 1.5e-19 100.5 181 38.1
AT3G49560 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 2.5e-19 99.8 179 34.6
BcaNung01249 Brassica carinata HOM05D003018 ORTHO05D003402 2.5e-19 99.8 179 36.3
Carub.0005s1589 Capsella rubella HOM05D003018 ORTHO05D003402 5.6e-19 98.6 179 34.6
Sp5g12550 Schrenkiella parvula HOM05D003018 ORTHO05D003402 7.3e-19 98.2 177 37.3
Cpa.g.sc3.187 Carica papaya HOM05D003018 ORTHO05D003402 9.5e-19 97.8 120 46.7
AL5G29400 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 1.2e-18 97.4 179 34.6
Thhalv10010930m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 1.2e-18 97.4 179 35.8
BraA06t24904Z Brassica rapa HOM05D003018 ORTHO05D003402 6.2e-18 95.1 161 38.5
Gohir.D09G181900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 6.2e-18 95.1 120 44.2
C08p24540 Brassica napus HOM05D003018 ORTHO05D003402 8.1e-18 94.7 182 36.3
BolC8t50072H Brassica oleracea HOM05D003018 ORTHO05D003402 8.1e-18 94.7 182 36.3
Zm00001eb242440 Zea mays HOM05D003018 ORTHO05D003402 1.1e-17 94.4 121 47.9
A06p18200 Brassica napus HOM05D003018 ORTHO05D003402 1.4e-17 94.0 161 37.9
Psat1g196200 Pisum sativum HOM05D003018 ORTHO05D003402 1.4e-17 94.0 142 41.5
Psat6g092160 Pisum sativum HOM05D003018 ORTHO05D003402 1.4e-17 94.0 142 41.5
Aa31LG4G18050 Aethionema arabicum HOM05D003018 ORTHO05D003402 1.8e-17 93.6 166 35.5
BcaB01g00697 Brassica carinata HOM05D003018 ORTHO05D003402 1.8e-17 93.6 177 36.7
BcaC07g39417 Brassica carinata HOM05D003018 ORTHO05D003402 2.3e-17 93.2 179 36.3
unitig_62.g23859 Utricularia gibba HOM05D003018 ORTHO05D003402 8.9e-17 91.3 81 61.7
unitig_64.g29776 Utricularia gibba HOM05D000525 ORTHO05D001368 8.9e-17 91.3 81 61.7
ECA248G1111 Erigeron canadensis HOM05D001208 ORTHO05D001593 5.8e-16 88.6 173 35.8
PSO729G0279 Papaver somniferum HOM05D003018 ORTHO05D003402 9.2e-14 81.3 179 33.0
CSS0003954 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 2.7e-13 79.7 122 40.2
ECA248G2250 Erigeron canadensis HOM05D003018 ORTHO05D003402 2.7e-13 79.7 173 33.5
PSO724G0429 Papaver somniferum HOM05D003018 ORTHO05D003402 3.5e-13 79.3 177 33.3
PSO782G4498 Papaver somniferum HOM05D003018 ORTHO05D003402 6.0e-13 78.6 166 36.1
PSO339G1784 Papaver somniferum HOM05D003018 ORTHO05D003402 8.6e-12 74.7 170 34.1
PSO339G5858 Papaver somniferum HOM05D003018 ORTHO05D003402 8.6e-12 74.7 177 31.6
HanXRQChr11g0346471 Helianthus annuus HOM05D003018 ORTHO05D003402 1.1e-11 74.3 82 50.0
ECA248G0015 Erigeron canadensis HOM05D003018 ORTHO05D003402 3.3e-11 72.8 147 36.1
PSO339G6351 Papaver somniferum HOM05D003018 ORTHO05D003402 4.3e-11 72.4 190 32.6
Os02g0526500 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 5.6e-11 72.0 114 39.5
ECA232G1833 Erigeron canadensis HOM05D000455 ORTHO05D000434 1.4e-09 67.4 191 28.8
SEGI_14341 Sequoiadendron giganteum HOM05D003018 ORTHO05D003402 2.0e-08 63.5 72 52.8
ClCG00G004180 Citrullus lanatus HOM05D003018 ORTHO05D003402 4.4e-08 62.4 57 63.2
PSO017G0083 Papaver somniferum HOM05D003018 ORTHO05D003402 9.9e-08 61.2 90 41.1
PSO339G5543 Papaver somniferum HOM05D003018 ORTHO05D003402 9.9e-08 61.2 163 30.1
PSO832G1145 Papaver somniferum HOM05D003018 ORTHO05D003402 9.9e-08 61.2 88 43.2
PSO170G6331 Papaver somniferum HOM05D003018 ORTHO05D003402 1.3e-07 60.8 74 41.9
PSO210G3039 Papaver somniferum HOM05D003018 ORTHO05D003402 1.3e-07 60.8 74 41.9
Hma1.2p1_0115F.1_g055830 Hydrangea macrophylla HOM05D003018 ORTHO05D003402 1.7e-07 60.5 58 58.6
PSO832G4292 Papaver somniferum HOM05D003018 ORTHO05D003402 1.7e-07 60.5 117 33.3
Eucgr.K00528 Eucalyptus grandis HOM05D003018 ORTHO05D003402 2.2e-07 60.1 57 61.4
Cre03.g183100 Chlamydomonas reinhardtii HOM05D003018 ORTHO05D003402 6.4e-07 58.5 162 26.5
PRCOL_00000888 Prasinoderma coloniale HOM05D003018 ORTHO05D003402 6.4e-07 58.5 79 41.8
Lalb_Chr08g0239401 Lupinus albus HOM05D003018 ORTHO05D003402 8.4e-07 58.2 57 57.9
AUR62030652 Chenopodium quinoa HOM05D003018 ORTHO05D003402 3.2e-06 56.2 72 48.6


User provided reference genes

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