Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 2.3e-254 881.7 431 100.0
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 5.4e-248 860.5 432 97.9
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 7.0e-187 657.5 435 72.4
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 1.0e-185 653.7 445 71.5
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 1.9e-184 649.4 432 72.5
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 4.2e-184 648.3 443 72.9
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 2.7e-183 645.6 432 72.0
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 6.1e-183 644.4 432 71.8
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 1.0e-182 643.7 447 71.4
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 1.8e-182 642.9 440 70.0
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 1.5e-181 639.8 441 73.0
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 2.0e-181 639.4 445 71.0
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 7.4e-181 637.5 443 71.6
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 9.7e-181 637.1 432 70.6
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 2.2e-180 636.0 443 69.8
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 4.8e-180 634.8 459 68.0
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 1.2e-178 630.2 444 68.7
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 2.9e-177 625.5 447 69.8
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 3.8e-177 625.2 431 70.8
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 4.7e-175 618.2 440 69.8
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 6.1e-175 617.8 449 67.7
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 2.3e-174 615.9 450 65.6
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 1.5e-173 613.2 449 66.8
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 1.7e-172 609.8 440 68.9
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 4.8e-172 608.2 443 67.7
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 8.3e-172 607.4 463 65.0
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 3.1e-171 605.5 434 65.9
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 5.3e-171 604.7 436 67.0
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 1.2e-170 603.6 445 68.5
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 1.6e-170 603.2 493 62.3
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 2.7e-170 602.4 447 65.3
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 3.5e-170 602.1 450 63.8
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 7.7e-170 600.9 442 67.2
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.2e-169 599.4 442 66.3
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 5.0e-169 598.2 442 66.7
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 5.0e-169 598.2 451 64.5
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.5e-168 596.7 437 66.4
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 4.2e-168 595.1 445 67.6
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 5.5e-168 594.7 442 67.2
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 5.5e-168 594.7 442 65.2
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 5.5e-168 594.7 437 66.1
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.2e-167 593.6 437 65.9
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 1.6e-167 593.2 442 66.5
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 2.1e-167 592.8 443 64.6
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 1.4e-166 590.1 449 63.7
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 1.4e-166 590.1 449 63.7
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 1.4e-166 590.1 449 63.3
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 1.4e-166 590.1 449 63.7
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 2.3e-166 589.3 442 65.8
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 3.0e-166 589.0 475 63.6
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 2.0e-165 586.3 445 66.3
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 2.0e-165 586.3 440 66.8
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 3.4e-165 585.5 466 63.1
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 4.4e-165 585.1 445 63.6
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 7.5e-165 584.3 458 61.8
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 7.5e-165 584.3 443 63.9
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 1.3e-164 583.6 485 62.1
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.8e-163 579.7 422 66.6
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 2.4e-163 579.3 443 63.9
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.0e-161 573.9 535 55.3
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 4.2e-160 568.5 441 61.0
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 5.5e-160 568.2 441 60.3
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 5.5e-160 568.2 443 60.9
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 3.0e-158 562.4 428 65.7
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 6.8e-158 561.2 457 60.2
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 1.5e-157 560.1 437 65.7
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 7.5e-157 557.8 461 60.1
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 7.0e-155 551.2 520 55.8
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 2.7e-154 549.3 412 64.8
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 5.9e-154 548.1 399 71.2
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 8.6e-153 544.3 452 61.5
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.1e-152 543.9 430 63.7
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 5.6e-152 541.6 517 54.4
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.1e-151 539.7 424 62.5
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 2.2e-148 529.6 418 61.7
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 1.5e-144 516.9 440 59.1
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 1.1e-142 510.8 493 56.0
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 9.8e-141 504.2 332 72.6
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 4.9e-140 501.9 399 62.4
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 4.7e-135 485.3 468 54.5
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 1.9e-128 463.4 354 66.4
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 2.4e-126 456.4 459 54.0
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 9.2e-123 444.5 476 47.9
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.3e-121 439.9 396 56.3
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 4.9e-116 422.2 386 59.1
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 3.5e-106 389.4 457 43.1
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 4.6e-106 389.0 452 44.2
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 6.0e-106 388.7 452 44.2
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 1.3e-105 387.5 426 50.7
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 9.6e-104 381.3 323 59.1
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 6.9e-102 375.2 300 61.3
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 1.4e-99 367.5 424 49.5
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 4.2e-99 365.9 206 83.0
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 6.9e-94 348.6 260 65.4
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.5e-93 347.4 262 65.6
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 4.2e-91 339.3 208 77.9
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 1.8e-89 334.0 195 81.0
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.3e-87 327.8 196 77.0
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 1.8e-86 323.9 195 76.4
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 5.0e-84 315.8 182 80.8
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 1.2e-74 284.6 217 62.2
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.3e-73 280.4 227 56.4
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 6.7e-73 278.9 225 58.7
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 4.4e-72 276.2 166 75.3
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 1.7e-68 264.2 162 77.2
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 6.5e-68 262.3 235 56.2
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.5e-67 261.2 233 53.2
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 1.9e-67 260.8 242 54.5
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 9.7e-64 248.4 262 51.1
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 9.7e-64 248.4 200 61.5
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.5e-59 234.6 206 55.8
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 4.7e-58 229.6 203 52.7
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 1.4e-57 228.0 132 80.3
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 5.9e-53 212.6 338 39.1
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 7.2e-51 205.7 180 55.0
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 4.4e-48 196.4 162 56.8
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.8e-46 191.0 173 54.3
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 4.0e-41 173.3 97 85.6
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 5.0e-36 156.4 274 32.1
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 4.3e-35 153.3 258 40.3
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 5.6e-35 152.9 85 80.0
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 9.2e-30 135.6 240 38.8
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 9.2e-30 135.6 79 78.5
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.6e-26 124.8 71 76.1
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 2.4e-22 110.9 219 34.2
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 2.2e-15 87.8 53 71.7
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 8.4e-15 85.9 57 63.2
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 4.1e-14 83.6 52 75.0
Cre10.g466300 Chlamydomonas reinhardtii HOM05D006173 ORTHO05D007685 7.3e-11 72.8 352 25.0
Psat7g244360 Pisum sativum HOM05D000821 ORTHO05D000931 1.9e-06 58.2 43 60.5


User provided reference genes

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