Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO674G0057 Papaver somniferum HOM05D004899 ORTHO05D006580 3.4e-201 704.9 386 100.0
Aqoxy5G00161 Aquilegia oxysepala HOM05D004899 ORTHO05D006580 8.7e-165 583.9 393 81.7
Dinv06242 Davidia involucrata HOM05D004899 ORTHO05D006580 6.3e-163 577.8 394 81.2
TAR362G0172 Trochodendron aralioides HOM05D004899 ORTHO05D006580 6.3e-163 577.8 394 80.5
Nn1g02931 Nelumbo nucifera HOM05D004899 ORTHO05D006580 3.4e-161 572.0 394 79.9
MBI07_g12932_MAGBIO Magnolia biondii HOM05D004899 ORTHO05D006580 5.9e-161 571.2 395 80.8
Rhsim09G0133700 Rhododendron simsii HOM05D004899 ORTHO05D006580 3.8e-160 568.5 394 79.2
CSS0003371 Camellia sinensis var. sinensis HOM05D004899 ORTHO05D006580 1.6e-158 563.1 394 78.4
Actinidia34758 Actinidia chinensis HOM05D004899 ORTHO05D006580 1.0e-157 560.5 394 78.9
Thecc.05G269900 Theobroma cacao HOM05D004899 ORTHO05D006580 2.0e-156 556.2 394 76.1
CiPaw.08G118600 Carya illinoinensis HOM05D004899 ORTHO05D006580 3.3e-156 555.4 394 77.7
Prupe.6G350900 Prunus persica HOM05D004899 ORTHO05D006580 7.4e-156 554.3 394 78.2
Potri.019G020000 Populus trichocarpa HOM05D004899 ORTHO05D006580 2.8e-155 552.4 389 75.8
PGR142G4366 Punica granatum HOM05D004899 ORTHO05D006580 3.7e-155 552.0 394 77.7
Duzib106G1539 Durio zibethinus HOM05D004899 ORTHO05D006580 6.3e-155 551.2 394 75.4
Sabra19G0032200 Salix brachista HOM05D004899 ORTHO05D006580 6.3e-155 551.2 389 77.1
Potri.013G047800 Populus trichocarpa HOM05D004899 ORTHO05D006580 1.8e-154 549.7 394 75.1
MELO3C008694.2 Cucumis melo HOM05D004899 ORTHO05D006580 4.5e-153 545.0 394 77.2
FvH4_6g01740 Fragaria vesca HOM05D004899 ORTHO05D006580 5.9e-153 544.7 394 75.6
ClCG11G010490 Citrullus lanatus HOM05D004899 ORTHO05D006580 1.0e-152 543.9 394 77.2
FAN14G2287 Fragaria x ananassa HOM05D004899 ORTHO05D006580 1.0e-152 543.9 394 75.6
FAN14G4075 Fragaria x ananassa HOM05D004899 ORTHO05D006580 1.0e-152 543.9 394 75.6
RcHm_v2.0_Chr3g0449481 Rosa chinensis HOM05D004899 ORTHO05D006580 1.0e-152 543.9 393 76.1
CANSAT54G0581 Cannabis sativa HOM05D004899 ORTHO05D006580 1.7e-152 543.1 394 76.1
CsaV3_2G009880 Cucumis sativus L. HOM05D004899 ORTHO05D006580 2.9e-152 542.3 394 76.4
Manes.08G140200 Manihot esculenta HOM05D004899 ORTHO05D006580 5.0e-152 541.6 394 77.2
GSVIVG01023441001 Vitis vinifera HOM05D004899 ORTHO05D006580 6.5e-152 541.2 394 76.6
FAN05G0331 Fragaria x ananassa HOM05D004899 ORTHO05D006580 1.4e-151 540.0 394 74.9
FAN05G3121 Fragaria x ananassa HOM05D004899 ORTHO05D006580 1.4e-151 540.0 394 74.9
MD04G1231200 Malus domestica HOM05D004899 ORTHO05D006580 1.4e-151 540.0 395 77.2
Cc02_g08720 Coffea canephora HOM05D004899 ORTHO05D006580 1.9e-151 539.7 405 74.8
Gohir.A11G246300 Gossypium hirsutum HOM05D004899 ORTHO05D006580 2.5e-151 539.3 394 74.4
FAN09G4068 Fragaria x ananassa HOM05D004899 ORTHO05D006580 4.2e-151 538.5 394 74.9
Eucgr.B02154 Eucalyptus grandis HOM05D004899 ORTHO05D006580 1.2e-150 537.0 394 77.2
Gohir.D11G256500 Gossypium hirsutum HOM05D004899 ORTHO05D006580 2.1e-150 536.2 394 74.4
HanXRQChr08g0216941 Helianthus annuus HOM05D004899 ORTHO05D006580 2.7e-150 535.8 394 73.6
Solyc05g054950.2 Solanum lycopersicum HOM05D004899 ORTHO05D006580 2.7e-150 535.8 394 75.6
Gorai.007G274800 Gossypium raimondii HOM05D004899 ORTHO05D006580 3.6e-150 535.4 394 74.4
QL03p029772 Quercus lobata HOM05D004899 ORTHO05D006580 3.6e-150 535.4 409 74.3
TWI36G0265 Tripterygium wilfordii HOM05D004899 ORTHO05D006580 3.6e-150 535.4 394 74.1
Lsat_1_v5_gn_8_25181 Lactuca sativa HOM05D004899 ORTHO05D006580 1.0e-149 533.9 390 73.8
PGSC0003DMG400023503 Solanum tuberosum HOM05D004899 ORTHO05D006580 1.8e-149 533.1 394 75.4
Lj2A44T81 Lonicera japonica HOM05D004899 ORTHO05D006580 2.3e-149 532.7 438 70.5
Sed0011238 Sechium edule HOM05D004899 ORTHO05D006580 3.9e-149 531.9 397 75.3
Sc20g0000690 Simmondsia chinensis HOM05D004899 ORTHO05D006580 8.8e-149 530.8 395 73.2
ECA233G1223 Erigeron canadensis HOM05D004899 ORTHO05D006580 1.1e-148 530.4 394 70.3
Sopen05g033410 Solanum pennellii HOM05D004899 ORTHO05D006580 2.0e-148 529.6 394 75.1
Peaxi162Scf00015g02911 Petunia axillaris HOM05D004899 ORTHO05D006580 2.6e-148 529.3 394 74.6
CAN.G1465.15 Capsicum annuum HOM05D004899 ORTHO05D006580 7.4e-148 527.7 394 74.4
MSTRG.8229 Avicennia marina HOM05D004899 ORTHO05D006580 9.7e-148 527.3 392 74.7
Hund22166 Selenicereus undatus HOM05D004899 ORTHO05D006580 2.8e-147 525.8 394 70.8
Migut.F01538 Erythranthe guttata HOM05D004899 ORTHO05D006580 3.7e-147 525.4 394 73.9
Atru.chr2.1001 Acer truncatum HOM05D004899 ORTHO05D006580 5.9e-145 518.1 370 78.6
EL10Ac4g08990 Beta vulgaris HOM05D004899 ORTHO05D006580 5.9e-145 518.1 394 69.0
COL.COLO4_15501 Corchorus olitorius HOM05D004899 ORTHO05D006580 1.0e-144 517.3 378 75.1
AUR62040914 Chenopodium quinoa HOM05D004899 ORTHO05D006580 2.2e-144 516.2 394 65.5
Zm00001eb046420 Zea mays HOM05D004899 ORTHO05D006580 2.2e-144 516.2 395 72.4
Os10g0467200 Oryza sativa ssp. japonica HOM05D004899 ORTHO05D006580 4.2e-143 511.9 395 71.9
SalBow6G5574 Salvia bowleyana HOM05D004899 ORTHO05D006580 4.2e-143 511.9 417 71.2
SGA_v2.0_scaffold426G51496 Striga asiatica HOM05D004899 ORTHO05D006580 9.4e-143 510.8 394 74.4
Sp3g03310 Schrenkiella parvula HOM05D004899 ORTHO05D006580 8.0e-142 507.7 393 67.4
AL3G14410 Arabidopsis lyrata HOM05D004899 ORTHO05D006580 2.3e-141 506.1 393 67.2
THA.LOC104820770 Tarenaya hassleriana HOM05D004899 ORTHO05D006580 5.2e-141 505.0 392 66.3
Carub.0003s0362 Capsella rubella HOM05D004899 ORTHO05D006580 6.7e-141 504.6 393 67.2
Ciclev10024089m.g Citrus clementina HOM05D004899 ORTHO05D006580 1.2e-140 503.8 370 77.8
AT3G04460 Arabidopsis thaliana HOM05D004899 ORTHO05D006580 2.6e-140 502.7 393 66.7
arahy.Tifrunner.gnm1.ann1.VXFY9N Arachis hypogaea HOM05D004899 ORTHO05D006580 3.3e-140 502.3 393 72.8
arahy.Tifrunner.gnm1.ann1.A8VMLZ Arachis hypogaea HOM05D004899 ORTHO05D006580 5.7e-140 501.5 393 72.8
Thhalv10020878m.g Eutrema salsugineum HOM05D004899 ORTHO05D006580 9.7e-140 500.7 395 66.6
Aa31LG5G14890 Aethionema arabicum HOM05D004899 ORTHO05D006580 9.1e-138 494.2 393 67.9
Glyma.19G247700 Glycine max HOM05D004899 ORTHO05D006580 9.1e-138 494.2 387 73.4
ATR0736G049 Amborella trichopoda HOM05D004899 ORTHO05D006580 1.2e-137 493.8 395 70.4
VMungo0540G0495 Vigna mungo HOM05D004899 ORTHO05D006580 1.6e-137 493.4 390 71.8
Glyma.03G250100 Glycine max HOM05D004899 ORTHO05D006580 2.7e-137 492.7 394 72.6
Phvul.006G104800 Phaseolus vulgaris HOM05D004899 ORTHO05D006580 2.9e-136 489.2 394 71.3
DCAR_023087 Daucus carota HOM05D004899 ORTHO05D006580 8.5e-136 487.6 393 71.0
A03p33610 Brassica napus HOM05D004899 ORTHO05D006580 1.1e-135 487.3 395 65.1
BolC3t16350H Brassica oleracea HOM05D004899 ORTHO05D006580 1.9e-135 486.5 395 64.8
A05p43040 Brassica napus HOM05D004899 ORTHO05D006580 5.5e-135 485.0 392 62.8
BcaC01g04376 Brassica carinata HOM05D004899 ORTHO05D006580 1.6e-134 483.4 395 64.3
C03p40810 Brassica napus HOM05D004899 ORTHO05D006580 1.6e-134 483.4 395 64.3
Ca_11390_v3 Cicer arietinum L. HOM05D004899 ORTHO05D006580 1.4e-133 480.3 391 70.6
BraA03t12536Z Brassica rapa HOM05D004899 ORTHO05D006580 1.8e-133 479.9 400 64.2
CDE05G2618 Ceratophyllum demersum HOM05D004899 ORTHO05D006580 5.7e-132 474.9 393 67.9
Lj1g0026343 Lotus japonicus HOM05D004899 ORTHO05D006580 1.4e-130 470.3 405 67.2
Nitab4.5_0003965g0030 Nicotiana tabacum HOM05D004899 ORTHO05D006580 2.4e-130 469.5 394 69.5
vmacro10377 Vaccinium macrocarpon HOM05D004899 ORTHO05D006580 2.7e-129 466.1 426 65.3
BcaB04g19333 Brassica carinata HOM05D004899 ORTHO05D006580 4.5e-129 465.3 376 64.6
Lalb_Chr04g0253351 Lupinus albus HOM05D004899 ORTHO05D006580 5.0e-128 461.8 398 68.1
AUR62004828 Chenopodium quinoa HOM05D004899 ORTHO05D006580 1.1e-127 460.7 358 68.2
TPR.G10414 Trifolium pratense HOM05D004899 ORTHO05D006580 1.1e-127 460.7 388 68.8
unitig_899.g15065 Utricularia gibba HOM05D004899 ORTHO05D006580 2.3e-125 453.0 387 68.5
BcaC05g29943 Brassica carinata HOM05D004899 ORTHO05D006580 2.0e-121 439.9 384 61.2
BcaC05g30197 Brassica carinata HOM05D004899 ORTHO05D006580 7.8e-121 438.0 401 60.6
Nitab4.5_0000914g0090 Nicotiana tabacum HOM05D004899 ORTHO05D006580 4.4e-116 422.2 394 66.0
Medtr1g116380 Medicago truncatula HOM05D004899 ORTHO05D006580 3.7e-115 419.1 367 67.3
Ah.06g191810 Amaranthus hybridus HOM05D004899 ORTHO05D006580 4.7e-110 402.1 394 53.8
SMO367G0182 Selaginella moellendorffii HOM05D004899 ORTHO05D006580 1.2e-102 377.5 384 53.9
C05p62800 Brassica napus HOM05D004899 ORTHO05D006580 1.8e-101 373.6 372 56.2
HPP92_008536 Vanilla planifolia HOM05D004899 ORTHO05D006580 4.0e-101 372.5 287 74.6
Pp3c17_6400 Physcomitrium patens HOM05D004899 ORTHO05D006580 4.9e-99 365.5 395 52.7
Psat0s1997g0040 Pisum sativum HOM05D004899 ORTHO05D006580 2.4e-98 363.2 340 65.9
Cpa.g.sc306.4 Carica papaya HOM05D004899 ORTHO05D006580 3.6e-94 349.4 386 54.4
AagrBONN_evm.TU.Sc2ySwM_228.2413 Anthoceros agrestis HOM05D004899 ORTHO05D006580 1.8e-93 347.1 396 49.5
CARHR078590 Cardamine hirsuta HOM05D004899 ORTHO05D006580 7.1e-82 308.5 247 64.4
Haze_04413 Corylus avellana HOM05D004899 ORTHO05D006580 1.2e-81 307.8 328 61.9
Mapoly0097s0077 Marchantia polymorpha HOM05D004899 ORTHO05D006580 5.1e-80 302.4 295 55.3
RhsimUnG0045000 Rhododendron simsii HOM05D004899 ORTHO05D006580 3.9e-72 276.2 370 45.7
MD12G1249500 Malus domestica HOM05D004899 ORTHO05D006580 1.6e-70 270.8 302 53.6
SHI31416 Sapria himalayana HOM05D004899 ORTHO05D006580 2.6e-68 263.5 393 51.7
CANSAT80G2333 Cannabis sativa HOM05D004899 ORTHO05D006580 1.5e-63 247.7 182 66.5
CANSAT80G2786 Cannabis sativa HOM05D004899 ORTHO05D006580 1.6e-62 244.2 182 65.9
CBR_g51833 Chara braunii HOM05D004899 ORTHO05D006580 4.2e-58 229.6 540 32.6
Oeu050631.1 Olea europaea HOM05D004899 ORTHO05D006580 9.0e-53 211.8 284 45.4
Cre06.g263602 Chlamydomonas reinhardtii HOM05D004899 ORTHO05D006580 3.4e-52 209.9 411 34.1
Hma1.2p1_1336F.1_g276500 Hydrangea macrophylla HOM05D004899 ORTHO05D006580 9.7e-47 191.8 122 77.9
CARHR078600 Cardamine hirsuta HOM05D004899 ORTHO05D006580 1.3e-46 191.4 151 68.9
MCO09G554 Micromonas commoda HOM05D004899 ORTHO05D006580 2.8e-46 190.3 407 33.4
MD00G1148800 Malus domestica HOM05D004899 ORTHO05D006580 7.2e-42 175.6 205 51.2
PRCOL_00005674 Prasinoderma coloniale HOM05D004899 ORTHO05D006580 1.2e-41 174.9 390 31.8
BolC5t34933H Brassica oleracea HOM05D004899 ORTHO05D006580 2.7e-41 173.7 125 71.2
TPR.G8890 Trifolium pratense HOM05D001167 ORTHO05D001054 3.6e-41 173.3 165 53.3
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 1.2e-33 148.3 165 49.1
BraA05t23048Z Brassica rapa HOM05D004899 ORTHO05D006580 1.0e-32 145.2 91 76.9
Cc05_g01300 Coffea canephora HOM05D004899 ORTHO05D006580 3.1e-29 133.7 88 78.4
C01p22380 Brassica napus HOM05D004899 ORTHO05D006580 1.2e-28 131.7 123 56.1
Oeu040904.1 Olea europaea HOM05D004899 ORTHO05D006580 1.2e-28 131.7 71 78.9
SEGI_08581 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 5.0e-27 126.3 136 49.3
MD08G1214200 Malus domestica HOM05D004899 ORTHO05D006580 1.1e-26 125.2 71 84.5
Cc06_g01540 Coffea canephora HOM05D004899 ORTHO05D006580 4.2e-26 123.2 125 59.2
SEGI_05516 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 5.5e-26 122.9 88 64.8
BolC6t38557H Brassica oleracea HOM05D004899 ORTHO05D006580 5.7e-23 112.8 131 49.6
BraA04t16133Z Brassica rapa HOM05D004899 ORTHO05D006580 1.8e-21 107.8 107 55.1
Cc06_g14670 Coffea canephora HOM05D004899 ORTHO05D006580 4.1e-21 106.7 148 56.8
BcaC06g35909 Brassica carinata HOM05D004899 ORTHO05D006580 7.7e-20 102.4 150 41.3
FAN18G0756 Fragaria x ananassa HOM05D004899 ORTHO05D019122 6.8e-16 89.4 80 60.0
SEGI_06182 Sequoiadendron giganteum HOM05D004899 ORTHO05D006580 6.8e-16 89.4 48 75.0
Psat3g057720 Pisum sativum HOM05D004899 ORTHO05D006580 3.4e-15 87.0 50 68.0
BcaC09g50711 Brassica carinata HOM05D004899 ORTHO05D006580 1.6e-12 78.2 107 43.0
FvH4_3g30700 Fragaria vesca HOM05D004899 ORTHO05D019122 2.5e-10 70.9 51 66.7
Cc04_g06470 Coffea canephora HOM05D004899 ORTHO05D034818 7.2e-10 69.3 38 86.8
SalBow6G6423 Salvia bowleyana HOM05D031023 ORTHO05D019122 7.2e-10 69.3 46 73.9
Haze_02280 Corylus avellana HOM05D000013 ORTHO05D000689 4.7e-09 66.6 35 85.7
Psat3g113200 Pisum sativum HOM05D004899 ORTHO05D034818 8.0e-09 65.9 39 71.8
FvH4_4g13630 Fragaria vesca HOM05D004899 ORTHO05D019122 4.0e-08 63.5 43 72.1
MBI14_g47597_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 8.3e-06 55.8 50 62.0


User provided reference genes

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