Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO673G0018 Papaver somniferum HOM05D002230 ORTHO05D002441 4.3e-127 458.0 230 100.0
PSO421G0277 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-93 344.7 180 98.3
PSO264G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 2.6e-47 193.0 202 53.0
PSO673G0034 Papaver somniferum HOM05D002230 ORTHO05D002441 2.6e-47 193.0 202 53.0
PSO332G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 8.3e-46 188.0 202 51.5
PSO421G0346 Papaver somniferum HOM05D002230 ORTHO05D002441 8.3e-46 188.0 202 51.5
PSO724G0021 Papaver somniferum HOM05D002230 ORTHO05D302522 3.1e-40 169.5 120 77.5
PSO063G4741 Papaver somniferum HOM05D002230 ORTHO05D002441 1.5e-39 167.2 188 50.0
PSO339G1305 Papaver somniferum HOM05D002230 ORTHO05D002441 9.2e-37 157.9 151 55.0
PSO421G0643 Papaver somniferum HOM05D002230 ORTHO05D302161 9.9e-23 111.3 145 46.9
ClCG09G010650 Citrullus lanatus HOM05D002230 ORTHO05D002441 1.3e-14 84.3 94 44.7
MELO3C013185.2 Cucumis melo HOM05D002230 ORTHO05D002441 3.8e-14 82.8 94 42.6
CsaV3_7G021630 Cucumis sativus L. HOM05D002230 ORTHO05D002441 3.8e-14 82.8 94 42.6
QL03p066506 Quercus lobata HOM05D002230 ORTHO05D002441 4.9e-14 82.4 118 37.3
unitig_748.g7990 Utricularia gibba HOM05D002230 ORTHO05D002441 6.4e-14 82.0 221 30.3
SGA_v2.0_scaffold172G39053 Striga asiatica HOM05D002230 ORTHO05D002441 1.1e-13 81.3 208 27.9
Lalb_Chr01g0003061 Lupinus albus HOM05D002230 ORTHO05D002441 1.9e-13 80.5 199 30.7
Lalb_Chr19g0138431 Lupinus albus HOM05D002230 ORTHO05D002441 1.9e-13 80.5 178 30.9
PSO384G3823 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-13 80.1 204 32.8
Lj1g0018031 Lotus japonicus HOM05D002230 ORTHO05D002441 4.2e-13 79.3 199 31.7
Glyma.11G125100 Glycine max HOM05D002230 ORTHO05D002441 9.3e-13 78.2 199 30.2
Sed0010811 Sechium edule HOM05D002230 ORTHO05D002441 1.2e-12 77.8 211 31.8
CSS0042856 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 1.6e-12 77.4 94 40.4
Prupe.8G069100 Prunus persica HOM05D002230 ORTHO05D002441 1.6e-12 77.4 142 32.4
TPR.G34218 Trifolium pratense HOM05D002230 ORTHO05D002441 1.6e-12 77.4 207 31.4
Cfa015221 Carpinus fangiana HOM05D002230 ORTHO05D002441 2.1e-12 77.0 94 40.4
MD00G1071300 Malus domestica HOM05D002230 ORTHO05D002441 2.1e-12 77.0 197 27.9
SalBow4G2246 Salvia bowleyana HOM05D002230 ORTHO05D002441 2.1e-12 77.0 209 28.2
Glyma.12G049700 Glycine max HOM05D002230 ORTHO05D002441 3.5e-12 76.3 199 32.7
MD03G1154000 Malus domestica HOM05D002230 ORTHO05D002441 3.5e-12 76.3 197 27.4
Prupe.1G548200 Prunus persica HOM05D002230 ORTHO05D002441 3.5e-12 76.3 197 27.9
Actinidia32938 Actinidia chinensis HOM05D002230 ORTHO05D002441 4.6e-12 75.9 197 30.5
SHI00660 Sapria himalayana HOM05D002230 ORTHO05D002441 4.6e-12 75.9 192 31.2
Lj3g0013974 Lotus japonicus HOM05D002230 ORTHO05D002441 6.0e-12 75.5 199 31.2
PSO170G1574 Papaver somniferum HOM05D002230 ORTHO05D002441 6.0e-12 75.5 94 40.4
PSO782G1699 Papaver somniferum HOM05D002230 ORTHO05D002441 6.0e-12 75.5 94 40.4
Peaxi162Scf00282g00128 Petunia axillaris HOM05D002230 ORTHO05D002441 6.0e-12 75.5 197 27.4
SHI22050 Sapria himalayana HOM05D002230 ORTHO05D002441 6.0e-12 75.5 88 40.9
Sed0001302 Sechium edule HOM05D002230 ORTHO05D002441 6.0e-12 75.5 183 32.8
VMungo1127G0405 Vigna mungo HOM05D002230 ORTHO05D002441 6.0e-12 75.5 199 30.7
Aa31LG1G7760 Aethionema arabicum HOM05D002230 ORTHO05D002441 7.9e-12 75.1 88 40.9
GSVIVG01020936001 Vitis vinifera HOM05D002230 ORTHO05D002441 7.9e-12 75.1 142 35.2
CSS0011706 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 1.0e-11 74.7 94 39.4
Ca_20807_v3 Cicer arietinum L. HOM05D002230 ORTHO05D002441 1.3e-11 74.3 209 31.1
Dinv36883 Davidia involucrata HOM05D002230 ORTHO05D002441 1.3e-11 74.3 199 30.2
Sc13g0000880 Simmondsia chinensis HOM05D002230 ORTHO05D002441 1.3e-11 74.3 207 28.5
Haze_01398 Corylus avellana HOM05D002230 ORTHO05D002441 1.8e-11 73.9 94 39.4
Thhalv10006612m.g Eutrema salsugineum HOM05D002230 ORTHO05D002441 1.8e-11 73.9 88 39.8
Nitab4.5_0005729g0040 Nicotiana tabacum HOM05D002230 ORTHO05D002441 1.8e-11 73.9 197 28.4
Nitab4.5_0009733g0020 Nicotiana tabacum HOM05D002230 ORTHO05D002441 1.8e-11 73.9 197 28.4
Phvul.011G051900 Phaseolus vulgaris HOM05D002230 ORTHO05D002441 1.8e-11 73.9 199 30.2
Medtr4g068150 Medicago truncatula HOM05D002230 ORTHO05D002441 2.3e-11 73.6 208 29.8
Solyc01g097640.3 Solanum lycopersicum HOM05D002230 ORTHO05D002441 2.3e-11 73.6 197 27.9
Sopen00g003550 Solanum pennellii HOM05D002230 ORTHO05D002441 2.3e-11 73.6 197 27.9
Sopen01g041250 Solanum pennellii HOM05D002230 ORTHO05D002441 2.3e-11 73.6 197 27.9
ATR0317G080 Amborella trichopoda HOM05D002230 ORTHO05D002441 3.0e-11 73.2 189 30.2
CiPaw.01G173300 Carya illinoinensis HOM05D002230 ORTHO05D002441 3.0e-11 73.2 95 38.9
Migut.A00192 Erythranthe guttata HOM05D002230 ORTHO05D002441 3.0e-11 73.2 245 29.0
Eucgr.A00036 Eucalyptus grandis HOM05D002230 ORTHO05D002441 3.0e-11 73.2 94 39.4
Manes.09G003400 Manihot esculenta HOM05D002230 ORTHO05D002441 3.0e-11 73.2 95 38.9
Nn3g21087 Nelumbo nucifera HOM05D002230 ORTHO05D002441 3.0e-11 73.2 94 39.4
Hma1.2p1_0007F.1_g004970 Hydrangea macrophylla HOM05D002230 ORTHO05D002441 3.9e-11 72.8 94 39.4
Lj1A1071T61 Lonicera japonica HOM05D002230 ORTHO05D002441 3.9e-11 72.8 118 34.7
MBI04_g09487_MAGBIO Magnolia biondii HOM05D002230 ORTHO05D002441 3.9e-11 72.8 94 38.3
THA.LOC104815521 Tarenaya hassleriana HOM05D002230 ORTHO05D002441 3.9e-11 72.8 158 30.4
TWI38G2091 Tripterygium wilfordii HOM05D002230 ORTHO05D002441 3.9e-11 72.8 94 37.2
arahy.Tifrunner.gnm1.ann1.W5M1I0 Arachis hypogaea HOM05D002230 ORTHO05D002441 5.1e-11 72.4 205 30.2
CAN.G134.124 Capsicum annuum HOM05D002230 ORTHO05D002441 5.1e-11 72.4 198 27.8
Cc03_g10880 Coffea canephora HOM05D002230 ORTHO05D002441 5.1e-11 72.4 94 37.2
DCAR_027245 Daucus carota HOM05D002230 ORTHO05D002441 5.1e-11 72.4 142 33.1
TAR627G1002 Trochodendron aralioides HOM05D002230 ORTHO05D002441 5.1e-11 72.4 156 34.6
BolC8t52632H Brassica oleracea HOM05D002230 ORTHO05D002441 6.7e-11 72.0 88 39.8
Dinv44229 Davidia involucrata HOM05D002230 ORTHO05D002441 6.7e-11 72.0 198 29.3
Sp1g05450 Schrenkiella parvula HOM05D002230 ORTHO05D002441 6.7e-11 72.0 88 39.8
Carub.0001s0605 Capsella rubella HOM05D002230 ORTHO05D002441 8.7e-11 71.6 166 28.9
SMO358G0014 Selaginella moellendorffii HOM05D002230 ORTHO05D002441 8.7e-11 71.6 190 30.0
PGSC0003DMG403019442 Solanum tuberosum HOM05D002230 ORTHO05D002441 8.7e-11 71.6 197 27.4
BraA09t42020Z Brassica rapa HOM05D002230 ORTHO05D002441 1.1e-10 71.2 137 32.1
FAN17G0610 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.1e-10 71.2 194 29.9
SEGI_31495 Sequoiadendron giganteum HOM05D002230 ORTHO05D002441 1.1e-10 71.2 86 38.4
AT1G06720 Arabidopsis thaliana HOM05D002230 ORTHO05D002441 1.5e-10 70.9 188 27.7
arahy.Tifrunner.gnm1.ann1.XT66D5 Arachis hypogaea HOM05D002230 ORTHO05D002441 1.5e-10 70.9 205 29.3
FAN07G1373 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.5e-10 70.9 192 30.2
Psat7g208680 Pisum sativum HOM05D002230 ORTHO05D002441 1.5e-10 70.9 215 28.8
Aqoxy1G01987 Aquilegia oxysepala HOM05D002230 ORTHO05D002441 1.9e-10 70.5 177 32.8
C05p04900 Brassica napus HOM05D002230 ORTHO05D002441 1.9e-10 70.5 178 29.8
BolC5t29262H Brassica oleracea HOM05D002230 ORTHO05D002441 1.9e-10 70.5 178 29.8
Cpa.g.sc9.331 Carica papaya HOM05D002230 ORTHO05D002441 1.9e-10 70.5 198 28.3
Gohir.D10G204500 Gossypium hirsutum HOM05D002230 ORTHO05D002441 1.9e-10 70.5 197 26.4
Gorai.011G229500 Gossypium raimondii HOM05D002230 ORTHO05D002441 1.9e-10 70.5 197 26.4
vmacro16180 Vaccinium macrocarpon HOM05D002230 ORTHO05D002441 1.9e-10 70.5 197 28.4
A10p05300 Brassica napus HOM05D002230 ORTHO05D002441 2.5e-10 70.1 178 29.2
BraA10t42795Z Brassica rapa HOM05D002230 ORTHO05D002441 2.5e-10 70.1 178 29.2
AUR62021045 Chenopodium quinoa HOM05D002230 ORTHO05D002441 2.5e-10 70.1 94 38.3
Ciclev10027707m.g Citrus clementina HOM05D002230 ORTHO05D002441 2.5e-10 70.1 94 37.2
AL1G16730 Arabidopsis lyrata HOM05D002230 ORTHO05D002441 3.3e-10 69.7 189 29.6
FAN22G2096 Fragaria x ananassa HOM05D002230 ORTHO05D002441 3.3e-10 69.7 94 37.2
Atru.chr4.1347 Acer truncatum HOM05D002230 ORTHO05D002441 4.3e-10 69.3 197 27.4
FvH4_4g10660 Fragaria vesca HOM05D002230 ORTHO05D002441 4.3e-10 69.3 192 29.7
FAN12G3082 Fragaria x ananassa HOM05D002230 ORTHO05D002441 4.3e-10 69.3 192 29.7
FAN12G3273 Fragaria x ananassa HOM05D002230 ORTHO05D002441 4.3e-10 69.3 192 29.7
Gohir.A03G041200 Gossypium hirsutum HOM05D002230 ORTHO05D002441 4.3e-10 69.3 198 28.3
PSO832G2976 Papaver somniferum HOM05D002230 ORTHO05D002441 5.6e-10 68.9 102 39.2
HPP92_015122 Vanilla planifolia HOM05D002230 ORTHO05D002441 5.6e-10 68.9 206 27.7
C08p51050 Brassica napus HOM05D002230 ORTHO05D002441 7.4e-10 68.6 202 27.7
Ciclev10027721m.g Citrus clementina HOM05D002230 ORTHO05D002441 7.4e-10 68.6 195 28.2
PSO781G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 7.4e-10 68.6 80 46.2
ECA236G3424 Erigeron canadensis HOM05D002230 ORTHO05D002441 9.6e-10 68.2 95 37.9
Potri.017G017700 Populus trichocarpa HOM05D002230 ORTHO05D002441 9.6e-10 68.2 95 36.8
BcaC05g24645 Brassica carinata HOM05D002230 ORTHO05D002441 1.3e-09 67.8 184 28.8
BcaC07g42052 Brassica carinata HOM05D002230 ORTHO05D002441 1.3e-09 67.8 183 28.4
Gorai.003G133300 Gossypium raimondii HOM05D002230 ORTHO05D002441 1.3e-09 67.8 199 27.6
Mapoly0040s0120 Marchantia polymorpha HOM05D002230 ORTHO05D002441 1.6e-09 67.4 135 31.9
RcHm_v2.0_Chr4g0406311 Rosa chinensis HOM05D002230 ORTHO05D002441 1.6e-09 67.4 192 30.2
EL10Ac3g07289 Beta vulgaris HOM05D002230 ORTHO05D002441 2.1e-09 67.0 142 31.7
Gohir.A10G197400 Gossypium hirsutum HOM05D002230 ORTHO05D002441 2.1e-09 67.0 200 26.5
Thecc.10G116300 Theobroma cacao HOM05D002230 ORTHO05D002441 2.1e-09 67.0 193 26.9
Zm00001eb015920 Zea mays HOM05D002230 ORTHO05D002441 2.8e-09 66.6 93 36.6
A09p66820 Brassica napus HOM05D002230 ORTHO05D002441 3.7e-09 66.2 204 26.5
AUR62018398 Chenopodium quinoa HOM05D002230 ORTHO05D002441 3.7e-09 66.2 94 37.2
Ah.04g150630 Amaranthus hybridus HOM05D002230 ORTHO05D002441 4.8e-09 65.9 189 28.0
PSO675G3184 Papaver somniferum HOM05D002230 ORTHO05D002441 4.8e-09 65.9 181 28.7
PSO781G0074 Papaver somniferum HOM05D002230 ORTHO05D002441 4.8e-09 65.9 181 28.7
PSO781G0106 Papaver somniferum HOM05D002230 ORTHO05D002441 4.8e-09 65.9 181 28.7
PSO781G0261 Papaver somniferum HOM05D002230 ORTHO05D002441 4.8e-09 65.9 181 28.7
PSO781G0262 Papaver somniferum HOM05D002230 ORTHO05D002441 4.8e-09 65.9 181 28.7
Hund16448 Selenicereus undatus HOM05D002230 ORTHO05D002441 4.8e-09 65.9 189 27.5
Duzib114G0665 Durio zibethinus HOM05D002230 ORTHO05D002441 6.2e-09 65.5 200 26.5
GSVIVG01021891001 Vitis vinifera HOM05D002230 ORTHO05D002441 6.2e-09 65.5 90 41.1
CANSAT54G2648 Cannabis sativa HOM05D002230 ORTHO05D002441 8.1e-09 65.1 94 35.1
CARHR006400 Cardamine hirsuta HOM05D002230 ORTHO05D002441 1.1e-08 64.7 86 34.9
Lsat_1_v5_gn_6_31421 Lactuca sativa HOM05D002230 ORTHO05D002441 1.1e-08 64.7 95 37.9
PSO017G1730 Papaver somniferum HOM05D002230 ORTHO05D002441 1.1e-08 64.7 80 45.0
PSO081G0126 Papaver somniferum HOM05D002230 ORTHO05D002441 1.1e-08 64.7 117 36.8
Ciclev10018567m.g Citrus clementina HOM05D002230 ORTHO05D002441 1.4e-08 64.3 197 27.4
ECA233G0320 Erigeron canadensis HOM05D002230 ORTHO05D002441 1.4e-08 64.3 95 36.8
Os03g0333100 Oryza sativa ssp. japonica HOM05D002230 ORTHO05D002441 1.8e-08 63.9 138 28.3
RcHm_v2.0_Chr5g0051051 Rosa chinensis HOM05D002230 ORTHO05D002441 1.8e-08 63.9 192 29.7
HanXRQChr14g0454041 Helianthus annuus HOM05D002230 ORTHO05D002441 2.4e-08 63.5 167 31.1
PSO455G0070 Papaver somniferum HOM05D002230 ORTHO05D002441 3.1e-08 63.2 71 46.5
CDE06G0512 Ceratophyllum demersum HOM05D002230 ORTHO05D002441 4.0e-08 62.8 174 32.8
PSO541G6189 Papaver somniferum HOM05D002230 ORTHO05D303668 4.0e-08 62.8 94 40.4
Sed0025157 Sechium edule HOM05D002230 ORTHO05D002441 1.2e-07 61.2 169 31.4
Pp3c13_14960 Physcomitrium patens HOM05D002230 ORTHO05D002441 2.6e-07 60.1 193 29.0
PSO173G0158 Papaver somniferum HOM05D002230 ORTHO05D002441 7.6e-07 58.5 82 39.0
PSO063G2588 Papaver somniferum HOM05D002230 ORTHO05D002441 1.3e-06 57.8 81 40.7
Oeu023211.3 Olea europaea HOM05D002230 ORTHO05D002441 1.7e-06 57.4 142 25.4
PSO297G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 1.7e-06 57.4 28 100.0
PSO413G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 1.7e-06 57.4 28 100.0
PSO384G2856 Papaver somniferum HOM05D002230 ORTHO05D002441 2.9e-06 56.6 98 34.7
PSO673G0035 Papaver somniferum HOM05D002230 ORTHO05D002441 3.8e-06 56.2 82 36.6
PSO541G3453 Papaver somniferum HOM05D002230 ORTHO05D002441 4.9e-06 55.8 97 39.2
Dinv07890 Davidia involucrata HOM05D002230 ORTHO05D002441 6.4e-06 55.5 164 28.0
MCO01G316 Micromonas commoda HOM05D002230 ORTHO05D002441 6.4e-06 55.5 214 29.0
PSO173G0025 Papaver somniferum HOM05D002230 ORTHO05D002441 8.4e-06 55.1 163 28.8


User provided reference genes

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