Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 1.8e-148 529.3 268 100.0
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 6.8e-100 367.9 231 81.4
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 5.3e-92 341.7 261 67.4
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 4.2e-89 332.0 251 67.3
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 4.6e-80 302.0 184 81.5
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 6.5e-66 255.0 263 53.2
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 2.5e-62 243.0 248 52.8
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 2.0e-59 233.4 267 48.7
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 5.9e-59 231.9 261 51.0
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 6.5e-58 228.4 261 48.7
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.4e-57 227.3 264 50.0
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 7.2e-57 224.9 253 50.2
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 2.1e-56 223.4 262 46.6
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 3.6e-56 222.6 268 48.9
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 3.6e-56 222.6 265 47.9
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 6.1e-56 221.9 265 45.3
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 1.4e-55 220.7 265 49.8
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 1.8e-55 220.3 260 48.5
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.3e-55 219.9 273 46.5
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.0e-55 219.5 258 51.6
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 5.1e-55 218.8 265 48.3
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 1.1e-54 217.6 261 49.0
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.1e-54 217.6 266 48.1
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 1.5e-54 217.2 261 47.9
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 4.3e-54 215.7 260 50.0
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 5.7e-54 215.3 255 47.5
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 5.7e-54 215.3 269 47.2
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 1.3e-53 214.2 265 47.9
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 1.7e-53 213.8 220 55.0
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 2.2e-53 213.4 261 46.0
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 2.8e-53 213.0 264 46.2
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 3.7e-53 212.6 265 47.9
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 4.8e-53 212.2 267 45.7
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 6.3e-53 211.8 261 47.1
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 6.3e-53 211.8 265 48.3
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.4e-52 210.7 269 46.5
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 2.4e-52 209.9 264 47.3
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 3.1e-52 209.5 264 47.3
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.1e-52 209.5 265 46.0
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 5.3e-52 208.8 262 45.4
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 5.3e-52 208.8 265 44.9
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 6.9e-52 208.4 251 48.2
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 9.1e-52 208.0 261 46.4
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 9.1e-52 208.0 269 48.3
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 1.2e-51 207.6 264 47.0
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 1.2e-51 207.6 268 46.6
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.5e-51 207.2 249 46.2
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 1.5e-51 207.2 266 44.0
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 2.0e-51 206.8 269 43.9
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 2.6e-51 206.5 249 47.4
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 2.6e-51 206.5 269 45.7
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 3.4e-51 206.1 261 46.4
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 4.5e-51 205.7 267 43.1
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 2.9e-50 203.0 262 43.1
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 5.0e-50 202.2 264 45.1
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 8.5e-50 201.4 252 44.8
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.4e-49 200.7 272 43.0
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.9e-49 200.3 277 43.7
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.9e-49 200.3 260 45.4
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.5e-49 199.9 261 44.4
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 4.2e-49 199.1 253 47.8
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 7.2e-49 198.4 259 44.8
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 9.4e-49 198.0 273 44.7
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.2e-48 197.6 240 45.8
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.6e-48 197.2 265 45.3
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 2.1e-48 196.8 269 41.3
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 2.7e-48 196.4 264 42.4
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 3.6e-48 196.1 258 45.3
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 3.6e-48 196.1 289 40.8
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 4.7e-48 195.7 258 43.4
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 6.1e-48 195.3 259 43.2
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 7.9e-48 194.9 270 44.4
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 7.9e-48 194.9 270 45.6
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 1.4e-47 194.1 252 42.1
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.3e-47 193.4 270 44.4
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 3.0e-47 193.0 227 46.3
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 5.1e-47 192.2 265 44.2
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.1e-46 191.0 236 46.2
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 1.1e-46 191.0 263 39.9
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.5e-46 190.7 244 48.0
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 2.0e-46 190.3 260 41.2
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 2.0e-46 190.3 260 41.2
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 2.0e-46 190.3 272 42.3
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 3.3e-46 189.5 259 41.3
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 4.4e-46 189.1 268 43.3
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 4.4e-46 189.1 256 44.5
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 9.7e-46 188.0 270 40.4
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.3e-45 187.6 265 44.5
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 1.3e-45 187.6 265 43.4
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 1.7e-45 187.2 271 42.1
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 2.2e-45 186.8 263 42.2
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.2e-45 186.8 263 43.3
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 2.8e-45 186.4 241 47.3
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 4.8e-45 185.7 249 45.4
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 8.2e-45 184.9 262 40.1
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 8.2e-45 184.9 262 40.1
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 1.4e-44 184.1 266 40.2
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 1.4e-44 184.1 266 40.2
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.4e-44 184.1 254 42.9
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.4e-44 184.1 257 42.8
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 2.4e-44 183.3 258 42.6
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.4e-44 183.3 267 41.6
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.4e-44 183.3 267 42.3
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 3.1e-44 183.0 267 41.6
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 5.3e-44 182.2 270 41.1
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 7.0e-44 181.8 242 45.9
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.2e-43 181.0 260 43.5
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 2.0e-43 180.3 287 38.0
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 2.6e-43 179.9 258 43.4
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 2.6e-43 179.9 263 42.6
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 5.9e-43 178.7 284 39.8
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 5.9e-43 178.7 211 48.3
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 3.8e-42 176.0 255 41.2
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 3.2e-41 172.9 246 40.7
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 4.2e-41 172.6 272 39.7
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 5.5e-41 172.2 307 37.1
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 5.5e-41 172.2 220 43.6
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 1.2e-40 171.0 241 41.5
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.6e-40 170.6 219 41.1
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.6e-40 170.6 235 41.7
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.7e-40 169.9 262 38.9
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 4.7e-40 169.1 230 41.7
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 6.1e-40 168.7 270 37.4
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.4e-39 167.5 212 45.3
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 1.8e-39 167.2 210 44.8
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 1.8e-39 167.2 255 41.2
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 1.8e-39 167.2 232 40.9
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 2.3e-39 166.8 271 38.4
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 2.3e-39 166.8 264 40.2
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 6.7e-39 165.2 225 39.1
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 6.7e-39 165.2 166 54.8
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 8.8e-39 164.9 209 45.0
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 4.4e-38 162.5 211 41.7
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.3e-37 161.0 211 41.7
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.3e-37 161.0 275 36.7
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 6.3e-37 158.7 265 37.4
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 8.2e-37 158.3 174 48.3
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.0e-35 153.7 201 43.3
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 7.7e-35 151.8 248 40.3
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 2.9e-34 149.8 236 41.5
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 6.5e-34 148.7 248 39.9
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 8.5e-34 148.3 176 48.9
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.2e-32 144.4 152 50.7
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 8.0e-32 141.7 265 35.8
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 8.0e-32 141.7 180 44.4
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.0e-31 141.4 161 46.6
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 4.0e-31 139.4 222 40.5
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 3.4e-30 136.3 179 42.5
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 2.2e-29 133.7 220 34.1
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 4.8e-29 132.5 215 39.5
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 4.8e-29 132.5 227 38.3
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 6.3e-29 132.1 183 43.7
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 8.3e-29 131.7 267 35.6
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 4.1e-28 129.4 228 36.0
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 1.6e-27 127.5 233 35.6
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 5.9e-27 125.6 122 52.5
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 2.1e-24 117.1 166 39.8
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 4.0e-23 112.8 238 32.8
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 8.8e-23 111.7 118 50.0
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.5e-22 110.9 265 32.5
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 9.8e-22 108.2 304 28.0
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 5.4e-20 102.4 312 26.6
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 5.0e-18 95.9 251 33.1
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 1.9e-17 94.0 260 30.0
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 2.1e-16 90.5 260 30.4
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 2.8e-16 90.1 90 45.6
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.0e-15 88.2 200 34.5
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 5.2e-15 85.9 179 34.1
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 6.8e-15 85.5 77 62.3
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-12 76.6 135 34.1
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 4.1e-12 76.3 74 47.3
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 2.0e-11 73.9 132 34.8
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 6.6e-10 68.9 62 50.0
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 8.6e-10 68.6 67 55.2
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 1.1e-09 68.2 79 46.8
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.5e-09 67.8 76 51.3
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 9.5e-09 65.1 85 47.1
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.6e-08 64.3 80 47.5
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 1.0e-07 61.6 150 31.3
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 2.6e-06 57.0 41 61.0
Mapoly0119s0049 Marchantia polymorpha HOM05D003612 ORTHO05D004323 5.8e-06 55.8 82 36.6


User provided reference genes

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