Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 3.5e-141 505.0 258 100.0
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 7.4e-136 487.3 258 95.7
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 9.9e-64 247.7 255 55.3
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.7e-63 246.9 253 56.1
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.9e-63 245.4 242 56.6
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.2e-62 242.7 253 55.3
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 3.0e-60 236.1 234 58.1
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 3.0e-60 236.1 251 52.6
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 3.0e-60 236.1 251 52.6
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 8.7e-60 234.6 252 54.0
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.6e-58 230.3 253 54.5
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 6.2e-58 228.4 253 54.2
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 8.1e-58 228.0 253 54.2
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.1e-57 227.6 253 53.0
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 1.1e-57 227.6 248 54.4
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 1.4e-57 227.3 244 54.9
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 3.1e-57 226.1 253 53.8
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 9.0e-57 224.6 240 53.3
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 9.0e-57 224.6 240 53.3
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 4.5e-56 222.2 240 52.9
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 4.5e-56 222.2 240 52.9
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 4.5e-56 222.2 240 52.9
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 4.5e-56 222.2 240 52.9
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 4.5e-56 222.2 240 52.9
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 4.2e-54 215.7 238 53.4
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 5.5e-54 215.3 251 52.2
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 8.2e-50 201.4 198 57.6
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 1.8e-49 200.3 202 57.9
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 3.1e-49 199.5 205 56.1
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.5e-46 188.7 184 56.5
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.5e-46 188.7 184 56.5
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 9.3e-46 188.0 202 55.4
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 3.0e-44 183.0 200 53.0
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 3.0e-44 183.0 188 54.8
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 3.3e-43 179.5 183 51.9
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 9.7e-43 177.9 175 56.6
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 9.7e-43 177.9 198 55.1
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 9.7e-43 177.9 198 55.1
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 9.7e-43 177.9 198 55.1
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.8e-42 175.6 226 49.1
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 8.2e-42 174.9 180 54.4
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 6.5e-39 165.2 167 55.7
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 2.5e-38 163.3 160 51.9
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 3.2e-38 162.9 165 53.9
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 1.2e-37 161.0 210 49.0
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 6.1e-37 158.7 188 51.6
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.5e-35 154.1 174 51.7
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 3.3e-35 152.9 156 55.8
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.2e-29 134.4 135 52.6
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 5.1e-28 129.0 130 54.6
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 5.7e-27 125.6 134 56.0
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 3.1e-25 119.8 120 55.0
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.2e-24 117.9 147 47.6
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.5e-24 115.9 128 54.7
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.9e-24 115.5 164 48.2
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 2.5e-22 110.2 120 50.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 4.2e-22 109.4 172 38.4
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 8.0e-21 105.1 251 33.5
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.0e-19 100.5 107 50.5
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.5e-19 98.6 129 48.8
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 2.2e-18 97.1 227 34.4
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 2.8e-18 96.7 112 51.8
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 5.3e-17 92.4 90 55.6
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 2.0e-16 90.5 112 43.8
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 1.1e-14 84.7 87 51.7
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.4e-14 81.6 79 51.9
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 2.1e-13 80.5 115 44.3
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 3.6e-13 79.7 82 48.8
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 6.8e-12 75.5 75 53.3
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 8.8e-12 75.1 70 57.1
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 3.7e-10 69.7 89 49.4
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.0e-08 63.9 57 54.4
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 3.5e-08 63.2 48 62.5
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.5e-08 62.8 62 53.2
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.7e-08 62.0 57 57.9
Nitab4.5_0010321g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.9e-07 60.1 74 48.6


User provided reference genes

Program Settings