Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 6.6e-193 677.2 337 100.0
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 2.4e-187 658.7 329 99.1
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.1e-158 562.0 327 85.0
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 2.0e-152 542.7 327 80.7
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 3.3e-152 542.0 327 82.6
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 3.3e-152 542.0 327 82.0
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.7e-151 539.7 324 80.9
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.8e-151 538.9 329 79.9
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 3.7e-151 538.5 327 80.7
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 4.8e-151 538.1 327 79.8
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 6.3e-151 537.7 330 81.8
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.3e-151 537.7 329 79.6
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.3e-151 537.7 327 81.0
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.3e-151 537.7 327 80.7
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 8.2e-151 537.3 327 81.0
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.1e-150 537.0 327 80.4
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.1e-150 537.0 327 80.4
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.1e-150 537.0 327 81.0
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.1e-150 537.0 328 80.8
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.4e-150 535.8 327 81.0
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.1e-150 535.4 327 80.7
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 5.3e-150 534.6 327 79.8
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 6.9e-150 534.3 327 80.1
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 9.1e-150 533.9 330 79.1
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 7.7e-149 530.8 331 80.1
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 1.7e-148 529.6 327 78.6
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.7e-148 529.6 328 80.5
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.0e-148 528.1 329 81.2
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.4e-147 526.6 327 80.4
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 7.9e-146 520.8 327 79.2
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.4e-145 520.0 331 76.7
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.8e-145 517.3 333 76.6
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.3e-144 515.4 333 76.6
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 3.3e-144 515.4 331 77.0
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 4.4e-144 515.0 359 72.1
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 5.7e-144 514.6 331 75.8
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 7.4e-144 514.2 332 77.4
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 7.4e-144 514.2 304 83.6
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.3e-143 513.5 331 75.5
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.2e-143 512.7 344 74.4
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 2.8e-143 512.3 329 76.6
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.1e-142 510.4 304 82.9
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.1e-142 510.4 331 74.9
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.4e-142 510.0 342 76.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 1.4e-142 510.0 329 77.5
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.4e-142 510.0 330 75.8
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.4e-142 509.2 339 74.3
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 4.1e-142 508.4 328 76.5
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.0e-141 506.1 339 75.5
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 4.5e-141 505.0 333 75.4
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 5.9e-141 504.6 336 74.4
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 7.7e-141 504.2 326 77.6
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.7e-140 503.1 323 75.9
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 2.2e-140 502.7 329 76.0
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 3.8e-140 501.9 335 73.4
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.8e-140 501.9 331 74.3
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 6.5e-140 501.1 331 74.9
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 8.5e-140 500.7 328 76.5
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.5e-139 500.0 329 75.4
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 3.2e-139 498.8 331 74.9
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 9.4e-139 497.3 328 75.3
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.7e-138 495.0 331 75.5
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 8.0e-138 494.2 331 73.7
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 8.0e-138 494.2 308 78.6
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.0e-137 493.8 338 72.8
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.0e-137 492.3 329 75.4
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.0e-137 492.3 308 78.6
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 8.8e-137 490.7 331 74.9
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 2.6e-136 489.2 328 73.8
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 7.4e-136 487.6 337 74.2
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 9.7e-136 487.3 359 69.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.7e-135 486.5 328 73.8
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.7e-135 486.5 328 72.9
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 4.8e-135 485.0 308 77.6
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 8.2e-135 484.2 334 73.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.4e-134 483.4 288 82.3
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.4e-134 483.4 327 72.5
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 5.3e-134 481.5 334 72.5
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 2.0e-133 479.6 355 68.2
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 3.5e-133 478.8 333 72.4
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.5e-133 478.8 333 73.3
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 4.5e-133 478.4 326 72.7
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 5.9e-133 478.0 310 74.8
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.3e-132 476.9 383 65.5
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.3e-132 476.9 311 73.0
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.7e-132 476.5 327 73.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.2e-132 476.1 305 75.4
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 6.5e-132 474.6 305 77.0
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.1e-131 473.8 323 71.2
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.1e-131 473.8 313 74.4
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 1.5e-131 473.4 316 73.1
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.9e-131 473.0 312 70.8
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.9e-131 473.0 304 75.0
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 4.2e-131 471.9 310 73.5
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.6e-130 469.9 313 73.8
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.1e-130 469.5 322 72.4
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 2.7e-130 469.2 306 72.2
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.4e-129 466.8 306 71.9
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.8e-129 466.5 306 72.5
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 1.8e-129 466.5 332 67.2
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 3.0e-129 465.7 311 72.7
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 4.0e-129 465.3 306 71.6
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 4.0e-129 465.3 345 69.9
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 5.2e-129 464.9 333 67.6
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 6.8e-129 464.5 325 69.8
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.5e-128 463.4 330 67.3
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 1.5e-128 463.4 321 70.7
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 2.6e-128 462.6 330 67.3
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 3.4e-128 462.2 315 73.0
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 4.4e-128 461.8 333 67.0
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 4.4e-128 461.8 316 69.6
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 9.8e-128 460.7 316 72.2
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 2.8e-127 459.1 333 66.4
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 8.3e-127 457.6 305 72.5
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.1e-126 457.2 338 65.7
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.1e-126 457.2 310 71.0
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 3.1e-126 455.7 339 67.0
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 2.0e-125 453.0 327 70.9
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 5.9e-125 451.4 315 71.7
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 5.5e-123 444.9 273 81.3
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.7e-122 442.6 309 70.9
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 8.0e-122 441.0 335 65.1
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.4e-121 440.3 315 67.6
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.9e-119 431.8 307 67.8
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-118 430.6 316 67.1
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 7.0e-118 427.9 284 77.5
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.5e-115 420.2 246 83.7
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.4e-112 408.7 328 65.2
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.7e-111 406.8 507 47.5
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 4.0e-105 385.6 247 78.1
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 4.4e-104 382.1 281 66.5
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.4e-97 360.5 242 72.3
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 8.9e-97 357.8 331 54.7
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 4.9e-95 352.1 321 53.9
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 7.8e-93 344.7 208 79.8
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.9e-92 342.4 206 82.5
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 6.6e-92 341.7 224 76.3
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 4.6e-85 318.9 260 65.0
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.3e-84 317.4 260 64.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 1.9e-83 313.5 275 56.7
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 4.7e-82 308.9 229 69.9
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.4e-80 302.4 187 79.7
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 7.1e-78 295.0 184 78.8
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 4.8e-74 282.3 163 83.4
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.4e-67 258.5 179 69.8
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.9e-62 243.8 369 39.3
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 3.2e-62 243.0 178 69.1
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.6e-58 230.7 148 77.7
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 6.2e-58 228.8 269 47.6
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.3e-52 211.1 143 70.6
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 6.7e-52 208.8 138 71.7
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.4e-48 196.4 146 68.5
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 8.4e-47 191.8 315 40.3
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 9.7e-43 178.3 146 61.0
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.6e-32 143.7 153 50.3
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 3.0e-28 130.2 93 72.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.1e-28 129.4 255 36.1
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 2.2e-26 124.0 71 84.5
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 5.3e-25 119.4 211 35.1
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 7.0e-25 119.0 206 38.3
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 7.7e-24 115.5 290 33.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.6e-19 100.5 57 84.2
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.2e-18 97.4 61 77.0
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 4.8e-18 96.3 91 52.7
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 2.1e-13 80.9 75 54.7
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-11 74.3 44 72.7
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.3e-10 71.6 51 62.7
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.2e-10 70.9 45 68.9
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 5.0e-07 59.7 81 40.7


User provided reference genes

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