Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6407 Papaver somniferum HOM05D010434 ORTHO05D012099 2.6e-305 1051.2 518 100.0
PSO675G4518 Papaver somniferum HOM05D010434 ORTHO05D012099 4.2e-255 884.4 451 98.0
PSO675G5403 Papaver somniferum HOM05D010434 ORTHO05D012099 2.2e-195 686.0 482 75.5
PSO541G0642 Papaver somniferum HOM05D010434 ORTHO05D012099 6.6e-184 647.9 527 67.4
PSO675G5043 Papaver somniferum HOM05D010434 ORTHO05D012099 2.5e-183 646.0 542 64.2
PSO675G1207 Papaver somniferum HOM05D010434 ORTHO05D012099 9.9e-180 634.0 547 63.3
PSO675G7191 Papaver somniferum HOM05D010434 ORTHO05D012099 4.8e-158 562.0 537 60.3
PSO675G8523 Papaver somniferum HOM05D010434 ORTHO05D012099 2.9e-107 393.3 363 61.2
PSO675G8751 Papaver somniferum HOM05D010434 ORTHO05D012099 1.5e-98 364.4 514 47.5
PSO675G7526 Papaver somniferum HOM05D010434 ORTHO05D012099 1.5e-95 354.4 550 43.6
PSO541G1570 Papaver somniferum HOM05D010434 ORTHO05D012099 3.0e-91 340.1 287 64.8
PSO017G6479 Papaver somniferum HOM05D010434 ORTHO05D012099 3.3e-74 283.5 300 55.0
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.2e-71 275.0 525 37.7
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 8.4e-70 268.9 518 37.3
PSO541G3677 Papaver somniferum HOM05D010434 ORTHO05D012099 1.5e-63 248.1 505 38.2
PSO541G3427 Papaver somniferum HOM05D010434 ORTHO05D012099 9.9e-55 218.8 258 54.3
PSO407G0222 Papaver somniferum HOM05D010434 ORTHO05D012099 1.9e-53 214.5 279 50.2
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 4.0e-48 196.8 526 30.2
PSO541G0487 Papaver somniferum HOM05D010434 ORTHO05D012099 2.2e-46 191.0 291 42.3
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 6.2e-41 172.9 525 29.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.8e-38 163.7 488 28.1
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 3.8e-38 163.7 503 28.0
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 4.2e-37 160.2 470 29.1
PSO541G1395 Papaver somniferum HOM05D010434 ORTHO05D012099 4.6e-36 156.8 192 48.4
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 6.0e-36 156.4 504 26.8
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 7.9e-36 156.0 421 31.1
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 6.7e-35 152.9 489 27.0
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.5e-34 151.8 487 25.7
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 3.3e-34 150.6 487 28.5
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 2.2e-33 147.9 497 26.6
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 1.4e-32 145.2 496 27.2
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.1e-32 144.1 492 26.8
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 5.0e-30 136.7 506 26.1
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 5.0e-30 136.7 488 27.3
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.9e-29 134.8 397 28.0
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 3.2e-29 134.0 522 26.2
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 1.2e-28 132.1 503 26.4
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 2.7e-28 131.0 490 24.9
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 3.6e-28 130.6 489 25.4
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.4e-27 128.6 507 26.2
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.8e-27 128.3 485 24.9
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 5.1e-27 126.7 489 26.0
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 8.8e-27 125.9 512 26.0
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.1e-26 125.6 493 26.8
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.5e-26 125.2 492 27.6
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 2.5e-26 124.4 496 24.2
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 5.7e-26 123.2 513 24.4
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 7.4e-26 122.9 501 25.0
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 9.7e-26 122.5 516 25.8
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 3.7e-25 120.6 489 25.8
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.1e-24 119.0 489 25.8
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 1.8e-24 118.2 498 25.9
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 1.8e-24 118.2 503 27.2
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 2.4e-24 117.9 513 27.3
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 5.3e-24 116.7 529 23.3
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 5.3e-24 116.7 487 24.2
PSO832G1385 Papaver somniferum HOM05D010434 ORTHO05D012099 5.3e-24 116.7 276 34.8
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 6.9e-24 116.3 553 23.3
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 6.9e-24 116.3 422 27.5
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.2e-23 115.5 533 24.4
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.5e-23 115.2 523 23.1
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 1.5e-23 115.2 504 23.4
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 2.6e-23 114.4 489 25.6
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.6e-23 114.4 543 23.6
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 3.4e-23 114.0 494 27.1
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 7.7e-23 112.8 476 24.6
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.0e-22 112.5 546 26.0
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 1.3e-22 112.1 510 27.1
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.7e-22 111.7 539 26.3
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.2e-22 111.3 536 22.9
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 2.9e-22 110.9 546 26.0
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 5.0e-22 110.2 539 26.2
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 5.0e-22 110.2 520 25.4
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 6.5e-22 109.8 502 27.1
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 6.5e-22 109.8 521 24.8
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.4e-21 108.6 505 26.7
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 1.4e-21 108.6 410 24.1
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.9e-21 108.2 497 24.7
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.5e-21 107.8 503 24.7
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 3.2e-21 107.5 401 25.2
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 3.2e-21 107.5 498 24.5
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 4.2e-21 107.1 507 21.9
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 4.2e-21 107.1 489 23.1
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 5.5e-21 106.7 476 23.9
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 5.5e-21 106.7 421 25.4
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 7.2e-21 106.3 405 26.4
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.2e-20 105.5 475 22.9
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.6e-20 105.1 514 24.3
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 3.6e-20 104.0 519 25.8
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 3.6e-20 104.0 506 24.5
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 6.1e-20 103.2 482 23.0
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.1e-20 103.2 482 23.0
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 7.9e-20 102.8 479 25.3
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 1.0e-19 102.4 537 24.2
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.0e-19 102.4 482 23.4
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.4e-19 102.1 429 25.6
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 2.3e-19 101.3 417 25.2
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 3.0e-19 100.9 404 25.5
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 6.7e-19 99.8 509 23.0
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 6.7e-19 99.8 516 24.0
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 1.1e-18 99.0 389 24.7
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 1.1e-18 99.0 518 23.9
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.5e-18 98.6 417 24.7
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 3.3e-18 97.4 492 23.4
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 4.4e-18 97.1 410 26.1
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 5.7e-18 96.7 417 24.7
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 1.3e-17 95.5 351 25.9
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 1.7e-17 95.1 395 24.1
Cpa.g.sc1872.2 Carica papaya HOM05D002270 ORTHO05D002866 2.2e-17 94.7 399 25.6
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 1.1e-16 92.4 503 22.1
SEGI_39597 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.1e-16 92.4 406 25.6
SEGI_08864 Sequoiadendron giganteum HOM05D002270 ORTHO05D012099 2.4e-16 91.3 397 24.7
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 2.6e-15 87.8 408 26.2
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 1.7e-14 85.1 416 23.1
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 2.2e-14 84.7 418 27.8
PSO591G0123 Papaver somniferum HOM05D010434 ORTHO05D012099 2.2e-14 84.7 141 39.7
SHI16818 Sapria himalayana HOM05D002270 ORTHO05D012099 6.5e-14 83.2 270 26.7
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 6.5e-14 83.2 413 22.0
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 8.5e-14 82.8 460 25.0
PSO591G0064 Papaver somniferum HOM05D010434 ORTHO05D012099 5.5e-13 80.1 165 35.8
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 4.7e-12 77.0 469 22.8
C05p38590 Brassica napus HOM05D002270 ORTHO05D002866 2.3e-11 74.7 475 25.1
BolC5t32597H Brassica oleracea HOM05D002270 ORTHO05D002866 2.3e-11 74.7 475 25.1
Nn5g26982 Nelumbo nucifera HOM05D002270 ORTHO05D012099 1.3e-09 68.9 129 38.0
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 1.1e-08 65.9 162 30.2
Rhsim04G0127600 Rhododendron simsii HOM05D002270 ORTHO05D012099 5.9e-07 60.1 117 34.2
SEGI_33198 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 8.5e-06 56.2 164 29.9


User provided reference genes

Program Settings