Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.2e-271 938.3 471 100.0
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 5.3e-172 608.2 437 71.2
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 2.0e-171 606.3 446 69.3
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.4e-169 600.1 450 67.1
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.5e-169 599.4 436 69.7
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 4.2e-169 598.6 450 66.9
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 1.8e-167 593.2 434 68.7
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 5.7e-166 588.2 449 66.6
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 9.7e-166 587.4 449 65.9
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 2.8e-165 585.9 461 65.9
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 3.7e-165 585.5 430 69.1
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 1.4e-164 583.6 457 65.4
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 5.3e-164 581.6 449 65.5
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 2.0e-163 579.7 445 65.6
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 2.2e-162 576.2 446 66.4
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 8.5e-162 574.3 458 64.4
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 3.2e-161 572.4 456 64.7
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 5.5e-161 571.6 444 64.6
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 7.2e-161 571.2 439 67.0
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.2e-160 570.5 441 65.5
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 2.7e-160 569.3 447 64.4
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 2.7e-160 569.3 443 65.2
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 4.6e-160 568.5 444 64.2
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 6.1e-160 568.2 462 61.9
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 1.8e-159 566.6 446 64.6
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 6.7e-159 564.7 427 67.4
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 5.7e-158 561.6 430 65.6
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 1.3e-157 560.5 465 61.7
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 2.2e-157 559.7 465 61.9
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 1.8e-156 556.6 464 62.1
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 4.1e-156 555.4 444 64.0
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.9e-156 554.7 451 63.6
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.9e-156 554.7 447 64.7
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 2.0e-155 553.1 462 61.5
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 1.0e-154 550.8 453 61.8
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 1.0e-154 550.8 457 62.4
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 1.3e-154 550.4 444 64.2
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.4e-153 547.0 465 59.1
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.9e-153 546.6 437 63.2
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 1.9e-153 546.6 413 66.8
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 2.5e-153 546.2 447 62.2
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 4.2e-153 545.4 431 63.1
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.1e-152 543.1 441 62.8
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 4.7e-152 542.0 427 63.9
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 1.8e-151 540.0 438 61.6
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.8e-151 540.0 448 62.5
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.0e-151 539.3 444 63.1
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 8.8e-151 537.7 442 60.9
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 8.8e-151 537.7 446 61.9
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 1.1e-150 537.3 427 62.8
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.0e-150 536.6 408 64.2
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 2.0e-150 536.6 445 60.9
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 7.4e-150 534.6 446 62.3
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 1.3e-149 533.9 439 63.8
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 2.8e-149 532.7 438 60.5
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 4.8e-149 531.9 448 62.9
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 8.2e-149 531.2 445 63.6
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 3.1e-148 529.3 483 57.8
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.2e-147 527.3 464 58.8
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.2e-147 527.3 400 66.5
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 2.6e-147 526.2 438 61.9
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 4.5e-147 525.4 458 61.8
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 5.9e-147 525.0 443 62.5
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 7.7e-147 524.6 413 64.4
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.7e-146 523.5 444 62.2
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 2.9e-146 522.7 458 60.5
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 5.0e-146 521.9 446 59.9
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 5.0e-146 521.9 398 65.3
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 9.4e-145 517.7 450 62.7
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.8e-143 513.5 418 61.2
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 1.8e-143 513.5 451 62.5
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 3.0e-143 512.7 451 62.7
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 8.8e-143 511.1 469 58.2
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 1.1e-140 504.2 463 61.1
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 8.5e-138 494.6 468 58.8
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.9e-137 493.4 440 56.8
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 5.5e-137 491.9 431 59.2
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 6.1e-136 488.4 432 56.5
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 2.6e-134 483.0 532 52.6
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 4.8e-133 478.8 446 58.1
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 9.1e-132 474.6 463 53.6
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.2e-126 457.6 457 54.7
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.5e-126 457.2 359 63.8
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 8.0e-120 434.9 460 53.9
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 3.4e-118 429.5 434 51.4
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.0e-114 417.9 728 37.8
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 6.6e-114 415.2 315 64.8
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 8.6e-114 414.8 375 59.7
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 6.8e-111 405.2 302 64.9
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 2.6e-110 403.3 331 61.3
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 2.9e-109 399.8 365 53.7
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 8.3e-109 398.3 313 62.9
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 1.0e-106 391.3 368 48.9
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 4.7e-104 382.5 449 47.9
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 8.9e-103 378.3 317 62.1
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 4.1e-100 369.4 418 46.4
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 6.2e-96 355.5 313 59.4
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.8e-95 354.0 234 73.5
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 8.9e-95 351.7 314 58.3
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.3e-93 347.8 318 58.5
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 3.7e-93 346.3 313 58.5
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.9e-84 317.4 399 47.1
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.4e-79 301.2 216 73.1
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 8.7e-74 282.0 434 41.7
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 7.3e-73 278.9 348 46.0
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.0e-67 259.2 240 58.3
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 6.9e-63 245.7 212 60.4
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.2e-62 245.0 223 60.1
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 5.5e-60 236.1 172 65.1
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 4.3e-49 199.9 174 59.2
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.8e-47 194.5 212 53.3
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 9.0e-47 192.2 138 68.8
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 3.4e-46 190.3 229 46.7
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.9e-44 184.5 130 68.5
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 1.4e-31 141.7 135 59.3
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 1.8e-31 141.4 132 60.6
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 5.9e-30 136.3 98 66.3
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 2.2e-29 134.4 128 59.4
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 2.0e-25 121.3 140 42.1
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 9.4e-20 102.4 395 24.3
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 4.0e-18 97.1 76 65.8
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 4.4e-17 93.6 135 43.0
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 7.7e-14 82.8 58 70.7
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 5.9e-06 56.6 39 66.7


User provided reference genes

Program Settings