Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2610 Papaver somniferum HOM05D004718 ORTHO05D005838 0.0e+00 1241.9 601 100.0
PSO421G0298 Papaver somniferum HOM05D004718 ORTHO05D005838 1.6e-165 587.0 395 75.4
PSO017G4020 Papaver somniferum HOM05D004718 ORTHO05D005838 3.2e-145 519.6 396 68.7
PSO063G2513 Papaver somniferum HOM05D004718 ORTHO05D005838 3.0e-143 513.1 398 67.8
Aqoxy7G00911 Aquilegia oxysepala HOM05D004718 ORTHO05D005838 2.3e-127 460.3 399 56.9
TAR624G0199 Trochodendron aralioides HOM05D004718 ORTHO05D005838 3.6e-125 453.0 397 56.7
Dinv09445 Davidia involucrata HOM05D004718 ORTHO05D005838 3.2e-121 439.9 397 56.7
GSVIVG01035602001 Vitis vinifera HOM05D004718 ORTHO05D005838 2.1e-117 427.2 398 54.3
Nn8g40158 Nelumbo nucifera HOM05D004718 ORTHO05D005838 1.8e-116 424.1 399 54.6
MBI07_g41265_MAGBIO Magnolia biondii HOM05D004718 ORTHO05D005838 1.1e-110 404.8 398 54.5
EL10Ac2g03649 Beta vulgaris HOM05D004718 ORTHO05D005838 1.9e-110 404.1 396 52.8
MSTRG.2684 Avicennia marina HOM05D004718 ORTHO05D005838 4.8e-109 399.4 397 51.1
Haze_21689 Corylus avellana HOM05D004718 ORTHO05D005838 3.1e-108 396.7 399 53.1
Atru.chr12.843 Acer truncatum HOM05D004718 ORTHO05D005838 4.0e-108 396.4 399 52.1
Ciclev10007306m.g Citrus clementina HOM05D004718 ORTHO05D005838 6.9e-108 395.6 388 51.5
Lj7A755G38 Lonicera japonica HOM05D004718 ORTHO05D005838 9.0e-108 395.2 397 51.4
Actinidia03322 Actinidia chinensis HOM05D004718 ORTHO05D005838 1.2e-107 394.8 398 51.5
Rhsim04G0220700 Rhododendron simsii HOM05D004718 ORTHO05D005838 1.5e-107 394.4 398 50.5
COL.COLO4_18636 Corchorus olitorius HOM05D004718 ORTHO05D005838 2.6e-107 393.7 398 53.5
CSS0022336 Camellia sinensis var. sinensis HOM05D004718 ORTHO05D005838 3.4e-107 393.3 398 51.8
CSS0012298 Camellia sinensis var. sinensis HOM05D004718 ORTHO05D005838 7.6e-107 392.1 398 51.5
QL12p024639 Quercus lobata HOM05D004718 ORTHO05D005838 1.3e-106 391.3 409 51.3
Sc06g0001390 Simmondsia chinensis HOM05D004718 ORTHO05D005838 6.4e-106 389.0 396 51.0
Nitab4.5_0000964g0050 Nicotiana tabacum HOM05D004718 ORTHO05D005838 1.4e-105 387.9 403 51.1
Manes.18G079200 Manihot esculenta HOM05D004718 ORTHO05D005838 1.9e-105 387.5 398 52.5
Hund19371 Selenicereus undatus HOM05D004718 ORTHO05D005838 3.2e-105 386.7 385 51.7
Thecc.09G001900 Theobroma cacao HOM05D004718 ORTHO05D005838 1.2e-104 384.8 398 53.0
MD15G1110500 Malus domestica HOM05D004718 ORTHO05D005838 3.5e-104 383.3 398 51.5
AUR62028027 Chenopodium quinoa HOM05D004718 ORTHO05D005838 4.6e-104 382.9 396 51.0
CiPaw.07G215000 Carya illinoinensis HOM05D004718 ORTHO05D005838 7.9e-104 382.1 398 51.8
Hma1.2p1_0147F.1_g065850 Hydrangea macrophylla HOM05D004718 ORTHO05D005838 2.3e-103 380.6 385 52.5
PSO782G5635 Papaver somniferum HOM05D004718 ORTHO05D005838 2.3e-103 380.6 293 66.9
AUR62020697 Chenopodium quinoa HOM05D004718 ORTHO05D005838 8.7e-103 378.6 396 50.8
Oeu047653.1 Olea europaea HOM05D004718 ORTHO05D005838 8.7e-103 378.6 397 48.9
Duzib168G2024 Durio zibethinus HOM05D004718 ORTHO05D005838 1.1e-102 378.3 398 52.0
MD08G1133600 Malus domestica HOM05D004718 ORTHO05D005838 3.3e-102 376.7 398 50.5
Prupe.1G462800 Prunus persica HOM05D004718 ORTHO05D005838 3.3e-102 376.7 398 50.0
Cc07_g17410 Coffea canephora HOM05D004718 ORTHO05D005838 8.1e-101 372.1 397 49.6
SGA_v2.0_scaffold76G25169 Striga asiatica HOM05D004718 ORTHO05D005838 1.1e-100 371.7 398 48.5
CAN.G30.25 Capsicum annuum HOM05D004718 ORTHO05D005838 1.8e-100 370.9 398 50.8
CDE06G1884 Ceratophyllum demersum HOM05D004718 ORTHO05D005838 3.1e-100 370.2 395 50.4
TWI32G0049 Tripterygium wilfordii HOM05D004718 ORTHO05D005838 3.1e-100 370.2 419 48.9
PGSC0003DMG402018450 Solanum tuberosum HOM05D004718 ORTHO05D005838 4.0e-100 369.8 394 49.5
ECA240G2491 Erigeron canadensis HOM05D004718 ORTHO05D005838 1.2e-99 368.2 394 48.5
Gohir.D13G185401 Gossypium hirsutum HOM05D004718 ORTHO05D005838 3.4e-99 366.7 399 51.9
Gohir.A13G181900 Gossypium hirsutum HOM05D004718 ORTHO05D005838 7.6e-99 365.5 396 51.8
HanXRQChr03g0082331 Helianthus annuus HOM05D004718 ORTHO05D005838 2.2e-98 364.0 396 47.7
Gorai.013G211400 Gossypium raimondii HOM05D004718 ORTHO05D005838 3.8e-98 363.2 399 51.6
Solyc03g078390.3 Solanum lycopersicum HOM05D004718 ORTHO05D005838 3.8e-98 363.2 394 48.5
CANSAT25G2838 Cannabis sativa HOM05D004718 ORTHO05D005838 4.9e-98 362.8 398 49.2
Migut.H01115 Erythranthe guttata HOM05D004718 ORTHO05D005838 4.9e-98 362.8 398 48.0
RcHm_v2.0_Chr6g0312261 Rosa chinensis HOM05D004718 ORTHO05D005838 4.9e-98 362.8 398 47.7
Sopen03g021200 Solanum pennellii HOM05D004718 ORTHO05D005838 8.4e-98 362.1 394 48.2
Zm00001eb310400 Zea mays HOM05D004718 ORTHO05D005838 1.1e-97 361.7 399 48.4
FAN20G1074 Fragaria x ananassa HOM05D003231 ORTHO05D005838 1.9e-97 360.9 418 46.4
arahy.Tifrunner.gnm1.ann1.N8XBBJ Arachis hypogaea HOM05D004718 ORTHO05D005838 2.4e-97 360.5 398 48.5
Peaxi162Scf00583g00537 Petunia axillaris HOM05D004718 ORTHO05D005838 3.2e-97 360.1 399 49.4
Potri.005G179500 Populus trichocarpa HOM05D004718 ORTHO05D005838 3.2e-97 360.1 398 48.7
CDE04G3074 Ceratophyllum demersum HOM05D004718 ORTHO05D005838 5.5e-97 359.4 395 48.9
ATR0006G074 Amborella trichopoda HOM05D004718 ORTHO05D005838 7.1e-97 359.0 394 47.7
arahy.Tifrunner.gnm1.ann1.7TNR6F Arachis hypogaea HOM05D004718 ORTHO05D005838 2.1e-96 357.5 398 48.2
Nitab4.5_0000004g0240 Nicotiana tabacum HOM05D004718 ORTHO05D005838 3.5e-96 356.7 398 48.7
Glyma.14G132500 Glycine max HOM05D004718 ORTHO05D005838 4.6e-96 356.3 398 48.2
CsaV3_2G031540 Cucumis sativus L. HOM05D004718 ORTHO05D005838 1.3e-95 354.8 398 50.3
FvH4_2g30650 Fragaria vesca HOM05D004718 ORTHO05D005838 1.3e-95 354.8 418 45.7
HPP92_023163 Vanilla planifolia HOM05D004718 ORTHO05D005838 1.3e-95 354.8 400 46.5
MELO3C011203.2 Cucumis melo HOM05D004718 ORTHO05D005838 1.8e-95 354.4 398 49.7
Glyma.04G074300 Glycine max HOM05D004718 ORTHO05D005838 3.0e-95 353.6 398 48.5
DCAR_000697 Daucus carota HOM05D004718 ORTHO05D005838 4.3e-94 349.7 416 45.7
VMungo1309G0968 Vigna mungo HOM05D004718 ORTHO05D005838 4.3e-94 349.7 404 48.3
Sed0011780 Sechium edule HOM05D004718 ORTHO05D005838 7.4e-94 349.0 398 49.7
Ah.11g044230 Amaranthus hybridus HOM05D004718 ORTHO05D005838 1.6e-93 347.8 392 48.5
ClCG08G012790 Citrullus lanatus HOM05D004718 ORTHO05D005838 1.6e-93 347.8 398 49.2
Potri.002G081600 Populus trichocarpa HOM05D004718 ORTHO05D005838 1.6e-93 347.8 398 47.2
Glyma.06G075500 Glycine max HOM05D004718 ORTHO05D005838 2.1e-93 347.4 398 47.7
Lsat_1_v5_gn_5_59280 Lactuca sativa HOM05D004718 ORTHO05D005838 2.8e-93 347.1 398 46.2
Sabra02G0063900 Salix brachista HOM05D004718 ORTHO05D005838 4.8e-93 346.3 399 47.9
Ca_12884_v3 Cicer arietinum L. HOM05D004718 ORTHO05D005838 6.2e-93 345.9 397 47.6
Glyma.17G201000 Glycine max HOM05D004718 ORTHO05D005838 8.2e-93 345.5 398 47.5
Lalb_Chr08g0243651 Lupinus albus HOM05D004718 ORTHO05D005838 2.4e-92 344.0 398 46.0
Lj5g0017014 Lotus japonicus HOM05D004718 ORTHO05D005838 4.0e-92 343.2 398 46.5
Zm00001eb008340 Zea mays HOM05D004718 ORTHO05D005838 6.9e-92 342.4 399 46.4
Thhalv10010085m.g Eutrema salsugineum HOM05D004718 ORTHO05D005838 5.8e-91 339.3 395 47.3
PGR142G1098 Punica granatum HOM05D004718 ORTHO05D005838 5.8e-91 339.3 397 46.1
Phvul.009G100000 Phaseolus vulgaris HOM05D004718 ORTHO05D005838 1.7e-90 337.8 398 46.5
Sed0007031 Sechium edule HOM05D004718 ORTHO05D005838 3.8e-90 336.7 398 48.5
C08p24600 Brassica napus HOM05D004718 ORTHO05D005838 4.2e-89 333.2 395 45.3
Lalb_Chr14g0362131 Lupinus albus HOM05D004718 ORTHO05D005838 5.5e-89 332.8 396 46.5
Medtr3g108660 Medicago truncatula HOM05D004718 ORTHO05D005838 5.5e-89 332.8 398 46.2
BcaB01g00691 Brassica carinata HOM05D004718 ORTHO05D005838 7.1e-89 332.4 395 45.8
BcaC07g39424 Brassica carinata HOM05D004718 ORTHO05D005838 7.1e-89 332.4 395 45.1
A06p18130 Brassica napus HOM05D004718 ORTHO05D005838 7.1e-89 332.4 395 44.8
BraA06t24901Z Brassica rapa HOM05D004718 ORTHO05D005838 7.1e-89 332.4 395 44.8
BolC8t50076H Brassica oleracea HOM05D004718 ORTHO05D005838 1.2e-88 331.6 395 45.1
Psat6g031760 Pisum sativum HOM05D004718 ORTHO05D005838 1.6e-88 331.3 398 46.7
Medtr1g010040 Medicago truncatula HOM05D004718 ORTHO05D005838 2.1e-88 330.9 397 46.1
TPR.G1019 Trifolium pratense HOM05D004718 ORTHO05D005838 3.5e-88 330.1 390 46.4
Actinidia25724 Actinidia chinensis HOM05D004718 ORTHO05D005838 2.3e-87 327.4 352 48.9
Sp5g12510 Schrenkiella parvula HOM05D004718 ORTHO05D005838 2.3e-87 327.4 395 44.6
Phvul.001G057700 Phaseolus vulgaris HOM05D004718 ORTHO05D005838 3.0e-87 327.0 401 44.4
THA.LOC104799000 Tarenaya hassleriana HOM05D004718 ORTHO05D005838 5.1e-87 326.2 397 43.8
A06p28290 Brassica napus HOM05D004718 ORTHO05D005838 1.5e-86 324.7 396 45.2
BraA06t25772Z Brassica rapa HOM05D004718 ORTHO05D005838 1.5e-86 324.7 396 45.2
AL5G29440 Arabidopsis lyrata HOM05D004718 ORTHO05D005838 1.9e-86 324.3 395 44.3
AT3G49600 Arabidopsis thaliana HOM05D004718 ORTHO05D005838 9.7e-86 322.0 395 43.8
Ca_15681_v3 Cicer arietinum L. HOM05D004718 ORTHO05D005838 2.2e-85 320.9 398 46.2
TPR.G12432 Trifolium pratense HOM05D004718 ORTHO05D005838 1.8e-84 317.8 398 45.5
Carub.0005s1593 Capsella rubella HOM05D004718 ORTHO05D005838 5.3e-84 316.2 395 44.1
Hma1.2p1_0147F.1_g065870 Hydrangea macrophylla HOM05D004718 ORTHO05D005838 4.5e-83 313.2 341 49.9
Hma1.2p1_2965F.1_g330973 Hydrangea macrophylla HOM05D004718 ORTHO05D005838 4.5e-83 313.2 341 49.9
VMungo0647G1764 Vigna mungo HOM05D004718 ORTHO05D005838 4.5e-83 313.2 459 41.0
Psat5g025880 Pisum sativum HOM05D004718 ORTHO05D005838 5.9e-83 312.8 401 44.9
Cpa.g.sc42.62 Carica papaya HOM05D004718 ORTHO05D005838 1.3e-82 311.6 307 53.7
Aa31LG4G18090 Aethionema arabicum HOM05D004718 ORTHO05D005838 1.4e-81 308.1 396 43.9
RcHm_v2.0_Chr6g0312311 Rosa chinensis HOM05D004718 ORTHO05D005838 6.7e-79 299.3 318 49.4
BcaB02g09597 Brassica carinata HOM05D004718 ORTHO05D005838 4.8e-77 293.1 361 44.3
C03p65460 Brassica napus HOM05D004718 ORTHO05D005838 5.0e-74 283.1 396 42.7
FAN27G1892 Fragaria x ananassa HOM05D004718 ORTHO05D005838 3.2e-73 280.4 414 40.1
CARHR158620 Cardamine hirsuta HOM05D004718 ORTHO05D005838 7.9e-72 275.8 341 43.7
vmacro12747 Vaccinium macrocarpon HOM05D004718 ORTHO05D005838 5.5e-65 253.1 238 52.5
Eucgr.E04340 Eucalyptus grandis HOM05D004718 ORTHO05D005838 3.6e-64 250.4 380 37.4
Mapoly0015s0043 Marchantia polymorpha HOM05D004718 ORTHO05D005838 3.6e-64 250.4 421 36.6
Pp3c16_5610 Physcomitrium patens HOM05D004718 ORTHO05D005838 6.3e-61 239.6 418 35.2
unitig_699.g19717 Utricularia gibba HOM05D004718 ORTHO05D005838 1.8e-60 238.0 286 43.7
AL8G22480 Arabidopsis lyrata HOM05D004718 ORTHO05D005838 3.1e-60 237.3 343 39.1
TPR.G36582 Trifolium pratense HOM05D004718 ORTHO05D005838 2.0e-59 234.6 362 39.0
BcaC01g02422 Brassica carinata HOM05D004718 ORTHO05D005838 4.2e-57 226.9 266 45.5
SEGI_37293 Sequoiadendron giganteum HOM05D004718 ORTHO05D005838 1.8e-55 221.5 263 42.6
SMO367G0705 Selaginella moellendorffii HOM05D004718 ORTHO05D005838 9.7e-54 215.7 398 33.4
CBR_g19585 Chara braunii HOM05D004718 ORTHO05D005838 1.2e-46 192.2 433 30.0
SEGI_25158 Sequoiadendron giganteum HOM05D004718 ORTHO05D046641 4.9e-21 107.1 129 44.2
FAN17G1117 Fragaria x ananassa HOM05D004718 ORTHO05D046641 4.9e-13 80.5 104 41.3
BcaC01g02421 Brassica carinata HOM05D004718 ORTHO05D005838 3.9e-10 70.9 97 43.3
Cre01.g030450 Chlamydomonas reinhardtii HOM05D004718 ORTHO05D005838 6.6e-10 70.1 145 29.7
Eucgr.E04341 Eucalyptus grandis HOM05D004718 ORTHO05D005838 6.6e-10 70.1 76 43.4
unitig_699.g19716 Utricularia gibba HOM05D004718 ORTHO05D005838 5.6e-09 67.0 64 50.0
Os03g0192900 Oryza sativa ssp. japonica HOM05D004718 ORTHO05D005838 1.8e-07 62.0 55 56.4
CARHR158610 Cardamine hirsuta HOM05D004718 ORTHO05D005838 1.5e-06 58.9 55 58.2


User provided reference genes

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