Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 3.9e-173 611.3 294 100.0
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.0e-161 572.4 289 94.1
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.5e-124 449.9 284 73.9
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 4.8e-115 418.3 285 67.4
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 3.1e-114 415.6 285 68.8
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 2.7e-113 412.5 289 65.7
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 3.2e-111 405.6 286 66.8
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 6.1e-110 401.4 276 67.8
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 1.8e-109 399.8 287 64.8
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 2.3e-109 399.4 283 65.4
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 3.0e-109 399.1 285 65.6
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 1.2e-108 397.1 288 62.8
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 3.4e-108 395.6 285 65.3
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 2.8e-107 392.5 284 60.6
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 4.9e-107 391.7 293 63.1
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 5.0e-104 381.7 273 64.5
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.5e-103 380.2 285 63.2
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 1.2e-102 377.1 284 63.7
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 1.2e-102 377.1 286 62.2
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 3.6e-102 375.6 284 62.3
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 6.1e-102 374.8 286 61.2
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.8e-101 373.2 286 61.2
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.0e-100 369.8 288 61.1
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 3.4e-100 369.0 273 63.0
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.7e-99 366.7 286 58.4
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.9e-99 365.9 294 59.5
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 4.9e-99 365.2 267 60.3
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 3.2e-98 362.5 277 59.2
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 3.2e-98 362.5 282 58.9
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 5.4e-98 361.7 286 58.0
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 5.9e-97 358.2 297 58.2
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.0e-96 357.5 288 56.9
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 1.0e-96 357.5 272 60.3
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 8.6e-96 354.4 264 61.7
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.1e-95 354.0 294 58.5
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.1e-95 354.0 294 58.5
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 1.1e-95 354.0 290 58.6
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 4.3e-95 352.1 285 57.5
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 2.1e-94 349.7 290 56.6
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 2.8e-94 349.4 290 58.3
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 3.1e-93 345.9 234 66.7
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 3.1e-93 345.9 289 57.8
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 6.8e-93 344.7 292 53.1
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.2e-92 344.0 288 55.6
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.5e-92 343.6 241 65.1
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 4.4e-92 342.0 291 55.0
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 5.8e-92 341.7 289 57.1
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 5.8e-92 341.7 287 54.7
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 8.3e-91 337.8 275 57.8
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 4.1e-90 335.5 277 59.6
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.0e-89 333.2 269 55.4
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 3.9e-88 328.9 290 54.8
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 9.5e-87 324.3 276 58.0
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 9.5e-87 324.3 276 54.0
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 5.8e-84 315.1 292 53.8
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 2.2e-83 313.2 269 56.1
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 4.9e-83 312.0 288 53.5
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 4.9e-83 312.0 230 62.2
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 6.4e-83 311.6 284 49.6
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 8.4e-75 284.6 262 52.7
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 6.6e-72 275.0 317 47.3
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.5e-68 263.8 212 58.0
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 2.6e-68 263.1 227 53.7
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 4.4e-68 262.3 278 43.9
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 8.4e-67 258.1 271 42.4
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 1.1e-66 257.7 223 54.7
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.9e-66 256.9 273 41.0
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 2.5e-63 246.5 284 44.4
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 4.5e-60 235.7 211 52.6
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 8.4e-59 231.5 216 54.2
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 2.1e-57 226.9 228 50.0
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 4.8e-54 215.7 183 52.5
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 2.6e-52 209.9 375 34.1
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 5.5e-50 202.2 233 46.8
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 9.3e-34 148.3 107 61.7
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 3.0e-32 143.3 141 52.5
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.9e-31 140.6 105 63.8
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 2.5e-26 123.6 366 25.1
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 2.4e-21 107.1 64 70.3
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.3e-19 101.3 178 37.1
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 7.9e-17 92.0 64 70.3
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.0e-07 60.8 44 59.1
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 8.2e-06 55.5 58 44.8


User provided reference genes

Program Settings