Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 6.8e-82 307.4 166 100.0
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 4.4e-81 304.7 166 98.8
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 9.5e-68 260.4 167 80.8
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 2.0e-65 252.7 166 79.5
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 5.8e-65 251.1 168 78.6
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 7.5e-65 250.8 167 76.6
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 1.7e-64 249.6 168 77.4
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 1.7e-64 249.6 167 76.6
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.2e-64 249.2 167 76.6
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 2.4e-63 245.7 167 76.6
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 3.2e-63 245.4 167 74.9
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 4.1e-63 245.0 171 77.2
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 4.1e-63 245.0 168 76.2
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 4.1e-63 245.0 168 75.6
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 4.1e-63 245.0 168 76.2
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 5.4e-63 244.6 168 75.6
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 5.4e-63 244.6 167 75.4
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.4e-63 244.6 168 76.8
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 7.1e-63 244.2 167 75.4
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 7.1e-63 244.2 168 75.6
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 7.1e-63 244.2 168 75.6
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 7.1e-63 244.2 167 73.1
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 1.6e-62 243.0 168 75.0
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 2.7e-62 242.3 171 76.0
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 2.7e-62 242.3 167 74.3
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 2.7e-62 242.3 167 75.4
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 3.5e-62 241.9 168 74.4
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 6.0e-62 241.1 167 73.1
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 6.0e-62 241.1 167 74.9
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 7.8e-62 240.7 168 73.8
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.0e-61 240.4 170 75.9
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 3.0e-61 238.8 168 73.2
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 3.9e-61 238.4 169 74.0
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 3.9e-61 238.4 168 73.8
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 3.9e-61 238.4 168 75.0
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 5.1e-61 238.0 168 76.8
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 5.1e-61 238.0 169 74.0
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 6.6e-61 237.7 167 74.3
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 6.6e-61 237.7 169 73.4
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 8.6e-61 237.3 168 75.0
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 8.6e-61 237.3 169 72.2
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 1.1e-60 236.9 168 75.6
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.1e-60 236.9 167 71.3
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.9e-60 236.1 169 72.2
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 2.5e-60 235.7 172 72.1
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 3.3e-60 235.3 167 73.1
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 3.3e-60 235.3 167 74.3
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 5.6e-60 234.6 167 73.1
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 7.3e-60 234.2 166 74.1
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 7.3e-60 234.2 167 71.9
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 9.6e-60 233.8 169 72.2
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 1.6e-59 233.0 168 71.4
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.6e-59 233.0 169 72.2
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 2.8e-59 232.3 167 71.9
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 2.8e-59 232.3 161 74.5
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 4.7e-59 231.5 168 72.6
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 8.1e-59 230.7 172 70.3
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 1.1e-58 230.3 169 72.2
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 1.4e-58 229.9 168 73.8
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.4e-58 229.2 169 71.6
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 3.1e-58 228.8 168 72.0
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 4.0e-58 228.4 166 70.5
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 8.9e-58 227.3 169 71.0
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 8.9e-58 227.3 170 70.0
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 1.5e-57 226.5 169 70.4
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.6e-57 225.7 170 69.4
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 2.6e-57 225.7 168 68.5
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 3.4e-57 225.3 169 69.2
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 2.9e-56 222.2 168 70.2
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 2.9e-56 222.2 169 68.0
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 3.8e-56 221.9 169 68.6
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 3.8e-56 221.9 166 69.9
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 8.4e-56 220.7 173 71.1
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 8.4e-56 220.7 167 68.9
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.9e-55 219.5 168 68.5
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.2
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 3.2e-55 218.8 166 69.3
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 5.4e-55 218.0 164 70.7
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.2e-54 216.9 169 66.9
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 2.1e-54 216.1 166 66.9
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 67.9
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 3.5e-54 215.3 168 66.1
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 3.5e-54 215.3 168 65.5
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 4.6e-54 214.9 171 69.6
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 4.6e-54 214.9 171 69.6
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 6.0e-54 214.5 166 66.3
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 6.0e-54 214.5 166 66.3
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 1.0e-53 213.8 168 65.5
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 1.0e-53 213.8 168 65.5
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 1.0e-53 213.8 166 65.7
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 1.0e-53 213.8 168 65.5
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 1.3e-53 213.4 166 65.7
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 1.3e-53 213.4 168 64.9
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-53 213.4 168 64.9
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.3e-53 213.4 169 66.3
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 1.7e-53 213.0 168 64.9
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 2.3e-53 212.6 171 66.1
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 3.0e-53 212.2 167 65.9
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 3.0e-53 212.2 167 65.9
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 3.0e-53 212.2 167 68.3
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 5.1e-53 211.5 168 67.3
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 1.1e-52 210.3 168 64.3
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 1.9e-52 209.5 167 65.3
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 1.9e-52 209.5 169 64.5
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 1.9e-52 209.5 169 64.5
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 1.9e-52 209.5 169 64.5
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 2.5e-52 209.1 168 67.3
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 3.3e-52 208.8 163 65.0
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 3.3e-52 208.8 169 66.3
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 3.3e-52 208.8 171 67.8
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 4.3e-52 208.4 168 63.7
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 4.3e-52 208.4 163 66.3
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 4.3e-52 208.4 162 64.2
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 5.6e-52 208.0 156 71.2
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 7.3e-52 207.6 168 66.7
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 9.6e-52 207.2 168 62.5
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.3e-51 206.8 144 74.3
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.6e-51 206.5 167 65.9
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.1e-51 206.1 163 63.8
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.1e-51 206.1 162 67.3
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 4.8e-51 204.9 153 69.9
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 6.2e-51 204.5 171 62.0
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 8.1e-51 204.1 167 65.3
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.1e-50 203.8 170 61.8
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.8e-50 203.0 172 59.9
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 1.8e-50 203.0 171 62.0
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 1.8e-50 203.0 170 66.5
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 2.4e-50 202.6 171 62.0
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 2.4e-50 202.6 171 62.0
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 2.4e-50 202.6 171 62.0
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 9.0e-50 200.7 168 61.3
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 2.0e-49 199.5 167 64.7
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 2.0e-49 199.5 170 65.9
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 2.6e-49 199.1 170 60.6
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 5.8e-49 198.0 172 59.9
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 5.8e-49 198.0 172 59.9
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 6.4e-48 194.5 161 64.6
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 7.1e-47 191.0 169 61.5
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 3.3e-44 182.2 102 82.4
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 7.3e-44 181.0 100 84.0
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 6.2e-43 177.9 102 80.4
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 5.3e-42 174.9 100 80.0
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 5.3e-42 174.9 167 60.5
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 1.3e-40 170.2 169 58.6
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 1.7e-40 169.9 163 60.7
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 2.1e-38 162.9 167 56.3
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 5.1e-37 158.3 140 62.1
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 8.1e-35 151.0 167 52.1
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.1e-34 150.6 172 52.3
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 3.1e-34 149.1 174 49.4
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.1e-34 149.1 169 53.3
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 9.0e-34 147.5 215 44.7
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 2.9e-32 142.5 179 47.5
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 8.7e-29 131.0 142 50.7
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 2.5e-28 129.4 147 50.3
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 7.4e-28 127.9 70 84.3
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 1.3e-27 127.1 171 51.5
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.1e-27 126.3 70 82.9
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 4.8e-27 125.2 167 46.7
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 2.4e-26 122.9 178 48.9
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 5.0e-24 115.2 176 42.6
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-19 100.5 67 71.6
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 8.2e-19 97.8 81 64.2
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 1.9e-15 86.7 44 88.6
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 3.8e-08 62.4 62 61.3
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 6.5e-08 61.6 68 60.3


User provided reference genes

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