Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 2.0e-242 842.0 436 100.0
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 2.4e-235 818.5 437 97.7
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 2.6e-165 585.9 405 70.9
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.9e-163 579.7 404 70.8
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 2.7e-162 575.9 409 69.2
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 4.0e-158 562.0 405 69.4
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 1.1e-152 543.9 404 65.6
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.5e-152 542.7 403 66.5
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.5e-152 542.7 402 66.4
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 5.6e-152 541.6 404 65.3
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 4.8e-151 538.5 405 64.9
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 1.4e-150 537.0 411 64.2
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.8e-150 536.6 403 65.8
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 9.0e-150 534.3 405 64.9
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.5e-149 533.5 419 62.1
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 2.0e-149 533.1 405 64.7
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.6e-149 532.7 402 63.7
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 7.6e-149 531.2 410 63.4
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 3.8e-148 528.9 392 63.8
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 3.8e-148 528.9 407 64.4
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 4.9e-148 528.5 404 62.6
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.9e-147 526.6 407 64.1
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.9e-147 526.6 402 63.9
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 1.9e-147 526.6 404 64.6
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 4.2e-147 525.4 408 63.5
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 5.4e-147 525.0 402 63.7
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 9.3e-147 524.2 404 63.6
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 9.3e-147 524.2 402 63.4
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 7.9e-146 521.2 412 61.7
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.0e-145 520.8 407 63.6
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.3e-145 520.4 400 62.8
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 1.8e-145 520.0 402 63.7
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.3e-145 519.6 391 64.5
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 3.0e-145 519.2 391 64.5
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 5.1e-145 518.5 399 63.4
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 5.1e-145 518.5 403 63.5
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 6.7e-145 518.1 391 64.2
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.1e-144 517.3 391 64.2
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 2.5e-144 516.2 411 61.1
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 2.5e-144 516.2 404 62.1
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.3e-144 515.4 391 63.9
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 4.3e-144 515.4 426 62.4
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 7.4e-144 514.6 396 63.6
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.6e-143 513.5 405 63.5
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 2.8e-143 512.7 403 61.3
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 4.8e-143 511.9 407 62.2
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 2.4e-142 509.6 405 60.7
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.0e-142 508.8 366 67.2
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 4.0e-142 508.8 405 61.5
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 4.0e-142 508.8 409 62.6
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 4.0e-142 508.8 409 62.6
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 5.3e-142 508.4 369 66.1
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.2e-141 507.3 396 62.4
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.5e-141 506.9 423 61.9
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 2.6e-141 506.1 376 67.0
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 4.5e-141 505.4 392 62.0
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 5.8e-141 505.0 401 61.1
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 7.6e-141 504.6 403 62.3
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 2.2e-140 503.1 409 62.6
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 2.9e-140 502.7 391 60.6
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 6.4e-140 501.5 403 60.3
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 3.2e-139 499.2 402 61.4
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 3.2e-139 499.2 431 60.6
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 2.7e-138 496.1 402 60.7
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 4.6e-138 495.4 362 65.7
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 4.3e-136 488.8 404 57.9
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 4.3e-136 488.8 393 59.5
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 5.7e-136 488.4 392 62.5
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 7.4e-136 488.0 393 61.1
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 2.8e-135 486.1 393 60.8
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 2.8e-135 486.1 394 60.9
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 3.7e-135 485.7 394 60.7
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 4.8e-135 485.3 393 60.8
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 6.2e-135 485.0 411 57.9
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.4e-134 483.8 394 60.7
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.4e-134 483.8 398 58.0
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 3.1e-134 482.6 405 59.3
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 4.0e-134 482.3 411 58.2
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 4.0e-134 482.3 398 58.0
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.2e-133 480.7 361 62.6
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 2.6e-133 479.6 402 57.0
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 3.4e-133 479.2 405 58.3
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 4.5e-133 478.8 369 62.6
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.7e-132 476.9 403 57.8
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 1.4e-131 473.8 393 58.8
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 1.9e-131 473.4 393 58.8
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 5.5e-131 471.9 390 58.5
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 5.5e-131 471.9 314 70.1
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 7.1e-131 471.5 457 52.5
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 9.3e-131 471.1 351 63.2
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.6e-130 470.3 362 64.1
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.1e-128 464.2 425 56.0
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.5e-125 453.8 470 50.9
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 3.2e-123 446.0 314 67.5
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.7e-119 433.7 341 60.4
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 4.8e-119 432.2 352 62.5
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.1e-118 431.0 313 67.1
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 4.1e-118 429.1 325 61.2
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 4.5e-117 425.6 341 59.2
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.6e-114 417.2 349 59.3
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 9.4e-107 391.3 310 60.3
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 1.8e-105 387.1 366 54.1
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.3e-103 380.9 282 64.9
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 2.4e-102 376.7 297 62.0
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 1.8e-97 360.5 271 65.7
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.4e-94 350.9 358 51.4
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 4.1e-94 349.4 284 62.0
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.3e-92 344.4 234 69.7
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.9e-91 340.5 352 52.8
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 3.4e-88 329.7 405 46.2
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 4.5e-85 319.3 333 51.7
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 3.8e-84 316.2 236 62.7
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 5.2e-81 305.8 283 56.2
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 5.4e-78 295.8 322 50.3
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 1.5e-75 287.7 261 54.8
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.0e-72 277.3 315 49.5
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 1.6e-69 267.7 214 60.3
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.5e-67 261.2 158 78.5
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 1.3e-63 248.1 168 64.9
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 3.9e-60 236.5 232 52.2
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.6e-51 206.1 163 63.2
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.2e-46 190.3 144 66.0
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 9.3e-38 162.2 282 34.0
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 1.4e-30 138.3 110 57.3
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 3.2e-30 137.1 116 55.2
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 1.6e-29 134.8 116 61.2
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 4.0e-25 120.2 113 58.4
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.4e-19 99.4 61 77.0
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 2.7e-13 80.9 149 34.9
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-12 79.0 107 41.1


User provided reference genes

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