Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 1.1e-154 550.1 309 100.0
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.4e-141 505.8 309 93.5
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.7e-68 263.1 308 51.3
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 8.2e-65 251.5 251 56.6
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 8.2e-65 251.5 252 57.1
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 3.5e-63 246.1 255 58.8
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.0e-62 244.6 247 56.3
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 1.3e-62 244.2 255 58.4
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.1e-61 241.1 250 55.2
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 9.4e-61 238.0 310 47.1
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 2.3e-59 233.4 253 56.9
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.2e-58 231.1 258 51.9
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 5.7e-58 228.8 243 56.8
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 7.5e-58 228.4 254 55.5
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 3.5e-55 219.5 310 44.8
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.0e-54 218.0 214 61.2
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 1.3e-54 217.6 259 52.1
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 6.5e-54 215.3 309 46.6
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 8.5e-54 214.9 232 52.2
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.1e-53 214.5 255 51.4
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 4.2e-53 212.6 312 43.3
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 5.5e-53 212.2 237 52.7
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 5.5e-53 212.2 249 51.0
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 7.2e-53 211.8 244 53.3
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 1.6e-52 210.7 255 51.0
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 4.7e-52 209.1 247 51.8
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 1.0e-51 208.0 254 50.0
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 1.4e-51 207.6 315 43.5
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 2.3e-51 206.8 253 47.4
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 2.3e-51 206.8 223 52.5
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.2e-50 204.5 263 49.0
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.2e-50 204.5 258 50.0
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 2.6e-50 203.4 252 50.0
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 4.4e-50 202.6 247 53.8
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 4.4e-50 202.6 247 54.7
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 9.8e-50 201.4 318 42.8
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 9.8e-50 201.4 317 44.5
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 1.3e-49 201.1 224 52.7
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.3e-49 201.1 260 48.5
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 1.7e-49 200.7 238 49.2
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.7e-49 200.7 257 48.6
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 2.2e-49 200.3 232 50.4
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 2.8e-49 199.9 238 49.2
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 2.8e-49 199.9 260 48.1
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 3.7e-49 199.5 240 49.6
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 4.9e-49 199.1 238 48.7
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 1.1e-48 198.0 257 48.6
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 1.1e-48 198.0 256 50.4
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 1.1e-48 198.0 231 50.6
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 1.4e-48 197.6 205 58.0
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 1.4e-48 197.6 241 51.9
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 1.8e-48 197.2 231 52.4
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 2.4e-48 196.8 219 50.7
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 5.4e-48 195.7 226 53.5
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 9.2e-48 194.9 231 52.4
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.6e-47 194.1 238 51.7
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 1.6e-47 194.1 260 46.5
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 2.0e-47 193.7 242 49.6
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 2.0e-47 193.7 307 43.0
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 2.0e-47 193.7 215 55.8
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 2.7e-47 193.4 225 52.9
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 5.9e-47 192.2 240 48.8
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 5.9e-47 192.2 268 48.1
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 5.9e-47 192.2 335 40.0
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 5.9e-47 192.2 214 53.3
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 1.0e-46 191.4 210 51.0
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 1.7e-46 190.7 246 47.6
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 6.6e-46 188.7 214 50.9
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 6.6e-46 188.7 227 53.3
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 6.6e-46 188.7 239 50.6
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.1e-45 188.0 238 52.1
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.3e-45 186.4 260 48.5
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 5.6e-45 185.7 259 45.2
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 7.3e-45 185.3 214 51.9
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 9.5e-45 184.9 214 49.5
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.6e-44 184.1 237 46.8
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 2.1e-44 183.7 189 54.0
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 2.8e-44 183.3 225 49.8
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 2.8e-44 183.3 240 50.0
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 3.0e-43 179.9 206 51.5
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 5.2e-43 179.1 234 47.9
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 6.8e-43 178.7 210 52.4
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 1.5e-42 177.6 227 49.3
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.0e-42 177.2 224 51.3
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 2.6e-42 176.8 220 50.0
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 3.7e-41 172.9 290 44.1
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 6.4e-41 172.2 298 41.3
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 8.3e-41 171.8 209 52.2
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 1.4e-40 171.0 236 45.3
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.8e-40 170.6 192 55.7
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 4.1e-40 169.5 193 54.9
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 7.8e-39 165.2 178 59.6
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 2.3e-38 163.7 243 42.4
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 1.1e-37 161.4 209 46.4
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.5e-37 160.2 209 49.8
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 4.7e-36 156.0 260 40.8
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 4.4e-34 149.4 334 33.8
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 5.8e-34 149.1 198 48.5
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.3e-27 127.1 255 36.5
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 3.1e-27 126.7 245 37.6
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 2.9e-25 120.2 237 37.6
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 1.1e-24 118.2 228 39.9
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.0e-22 111.7 149 49.7
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 6.6e-22 109.0 216 41.2
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.7e-17 94.4 148 40.5
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 3.5e-15 86.7 118 46.6
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 6.0e-15 85.9 62 69.4
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 7.3e-13 79.0 122 47.5
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 1.2e-10 71.6 121 39.7
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 1.3e-09 68.2 70 50.0
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.2e-09 67.4 154 37.7
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.9e-09 67.0 137 31.4
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.9e-09 67.0 108 39.8
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.2e-08 63.5 70 52.9
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 7.1e-08 62.4 103 36.9
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.7e-07 60.5 50 54.0
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.6e-06 55.8 42 66.7


User provided reference genes

Program Settings