Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 0.0e+00 1077.4 821 100.0
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 5.8e-275 951.0 821 78.0
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 3.8e-149 533.1 581 59.9
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.6e-81 307.8 447 52.6
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 3.0e-74 284.3 264 60.6
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 1.2e-73 282.3 246 63.4
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.6e-73 281.2 425 52.9
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 3.4e-73 280.8 247 61.1
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 3.4e-73 280.8 247 61.1
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 2.2e-72 278.1 305 54.8
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 2.9e-72 277.7 280 57.1
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 6.4e-72 276.6 257 61.1
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 1.1e-71 275.8 227 65.2
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 2.4e-71 274.6 262 58.4
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 4.1e-71 273.9 199 68.3
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 4.1e-71 273.9 199 68.3
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 5.4e-71 273.5 280 56.1
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 7.0e-71 273.1 265 57.7
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 1.0e-69 269.2 234 62.8
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 3.0e-69 267.7 226 61.9
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 5.0e-69 266.9 253 57.3
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 8.6e-69 266.2 289 63.3
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.5e-68 265.4 255 57.3
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 4.3e-68 263.8 255 57.3
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 4.3e-68 263.8 436 47.5
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 7.3e-68 263.1 257 57.2
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 9.5e-68 262.7 245 58.0
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 9.5e-68 262.7 279 54.1
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 1.6e-67 261.9 280 55.7
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 1.6e-67 261.9 223 61.9
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 1.6e-67 261.9 209 64.1
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.1e-67 261.5 264 54.9
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 2.1e-67 261.5 219 63.0
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 6.2e-67 260.0 227 62.6
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 6.2e-67 260.0 276 54.3
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 8.0e-67 259.6 241 59.3
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 1.4e-66 258.8 256 55.5
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 1.8e-66 258.5 180 71.1
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 2.3e-66 258.1 223 63.2
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.3e-66 258.1 282 53.2
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.3e-66 258.1 266 55.6
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 4.0e-66 257.3 269 55.8
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 4.0e-66 257.3 194 65.5
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 4.0e-66 257.3 434 50.0
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 5.2e-66 256.9 247 58.7
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 1.2e-65 255.8 258 56.6
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 1.2e-65 255.8 303 49.2
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 1.2e-65 255.8 296 52.0
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 1.5e-65 255.4 257 57.2
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 1.5e-65 255.4 218 61.9
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 2.0e-65 255.0 201 68.2
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 2.0e-65 255.0 306 51.3
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 3.4e-65 254.2 259 56.8
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 4.4e-65 253.8 219 61.6
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 5.8e-65 253.4 190 66.3
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 1.3e-64 252.3 200 65.5
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 1.3e-64 252.3 210 63.3
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 1.3e-64 252.3 206 64.6
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 1.7e-64 251.9 283 52.3
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 1.7e-64 251.9 217 60.8
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 2.2e-64 251.5 257 56.4
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 2.2e-64 251.5 303 51.5
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 2.2e-64 251.5 212 60.8
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 3.7e-64 250.8 246 57.3
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 4.9e-64 250.4 180 68.3
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 6.4e-64 250.0 201 64.7
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 6.4e-64 250.0 262 57.6
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 1.1e-63 249.2 213 61.5
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 1.1e-63 249.2 218 60.6
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 1.1e-63 249.2 256 54.3
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 2.4e-63 248.1 196 63.3
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 2.4e-63 248.1 184 69.6
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 4.1e-63 247.3 211 59.2
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 5.4e-63 246.9 211 59.7
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 5.4e-63 246.9 293 52.2
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 9.2e-63 246.1 185 64.9
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 1.2e-62 245.7 188 64.9
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 1.2e-62 245.7 255 54.5
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 1.2e-62 245.7 251 54.2
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 1.6e-62 245.4 236 58.1
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 2.7e-62 244.6 302 49.3
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 3.5e-62 244.2 299 48.2
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 4.6e-62 243.8 196 62.8
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 4.6e-62 243.8 198 64.6
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 6.0e-62 243.4 259 54.4
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 6.0e-62 243.4 212 58.5
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 6.0e-62 243.4 212 58.5
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 7.8e-62 243.0 180 67.2
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 1.0e-61 242.7 199 62.8
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 1.3e-61 242.3 277 50.2
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 1.3e-61 242.3 162 72.2
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 1.7e-61 241.9 269 54.3
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.7e-61 241.9 269 50.9
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 3.0e-61 241.1 196 65.3
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 3.9e-61 240.7 281 52.0
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 5.0e-61 240.4 199 62.8
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 2.5e-60 238.0 251 52.2
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 1.6e-59 235.3 291 49.5
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 1.6e-59 235.3 277 49.8
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 2.1e-59 235.0 181 64.6
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 2.8e-59 234.6 256 53.1
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 1.4e-58 232.3 227 58.6
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 1.2e-57 229.2 279 50.5
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 2.0e-57 228.4 202 59.9
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 2.6e-57 228.0 193 60.1
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 7.5e-57 226.5 329 45.9
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 3.7e-56 224.2 174 69.0
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 2.4e-55 221.5 302 48.0
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 7.1e-55 219.9 251 49.4
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 7.1e-55 219.9 310 45.5
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 2.7e-54 218.0 291 46.0
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 2.7e-54 218.0 215 52.1
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 1.3e-53 215.7 193 58.0
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 8.6e-53 213.0 301 43.5
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 1.1e-52 212.6 208 52.9
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 1.9e-52 211.8 182 79.1
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 2.5e-52 211.5 243 49.4
PSO339G0229 Papaver somniferum HOM05D004586 ORTHO05D005266 1.2e-51 209.1 484 56.8
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 3.6e-51 207.6 277 47.7
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 4.7e-51 207.2 164 62.8
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 3.1e-50 204.5 214 49.1
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 4.0e-50 204.1 432 43.1
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 1.3e-48 199.1 143 66.4
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 3.8e-48 197.6 237 47.7
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 3.8e-48 197.6 194 51.5
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 2.7e-46 191.4 229 47.2
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 3.5e-46 191.0 276 44.2
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 6.0e-46 190.3 194 53.6
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 6.0e-46 190.3 239 47.7
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 3.9e-45 187.6 169 59.8
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 2.5e-44 184.9 187 53.5
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 8.9e-42 176.4 320 38.8
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 2.0e-41 175.3 274 43.4
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 2.9e-40 171.4 177 50.8
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 3.8e-40 171.0 173 50.3
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 5.4e-39 167.2 243 46.9
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.3e-37 162.5 173 49.7
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 1.3e-37 162.5 136 53.7
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 8.1e-35 153.3 136 56.6
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 2.6e-33 148.3 183 46.4
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 7.6e-33 146.7 284 38.0
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 1.7e-32 145.6 213 42.7
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 4.8e-27 127.5 96 65.6
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 4.0e-26 124.4 119 56.3
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 9.3e-23 113.2 92 65.2
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 1.1e-15 89.7 71 59.2
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 3.9e-13 81.3 139 42.4
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 1.2e-09 69.7 182 28.0
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 4.5e-09 67.8 191 27.7
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 5.5e-07 60.8 100 36.0


User provided reference genes

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