Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 4.4e-311 1070.5 536 100.0
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 6.8e-301 1036.6 547 96.0
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 2.9e-158 562.8 524 55.7
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 3.1e-152 542.7 539 51.2
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.3e-150 537.3 534 51.7
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.1e-149 534.3 534 51.9
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 2.5e-149 533.1 536 50.4
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 1.3e-145 520.8 565 48.5
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 1.5e-143 513.8 532 50.8
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 3.2e-141 506.1 538 50.0
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.0e-139 499.6 530 50.2
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 2.6e-138 496.5 530 50.0
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.8e-137 493.0 542 49.3
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 8.2e-137 491.5 536 49.1
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.8e-136 490.3 435 56.6
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 4.1e-136 489.2 525 49.9
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 6.9e-136 488.4 530 49.2
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 4.5e-135 485.7 536 49.3
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.0e-134 484.6 530 48.1
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 6.5e-134 481.9 501 48.1
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 1.9e-133 480.3 535 48.0
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 2.5e-133 479.9 535 46.9
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 3.2e-133 479.6 536 46.6
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.2e-132 477.6 424 55.9
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 2.7e-132 476.5 584 45.5
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 6.1e-132 475.3 530 46.6
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 1.0e-131 474.6 539 46.9
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 3.0e-131 473.0 530 46.4
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 9.7e-130 468.0 536 46.5
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 2.4e-128 463.4 537 47.3
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 3.1e-128 463.0 574 44.3
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 2.6e-127 459.9 530 46.0
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 3.5e-127 459.5 534 44.9
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 2.5e-125 453.4 536 45.1
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.2e-125 452.6 481 49.3
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 9.4e-125 451.4 538 44.4
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 1.2e-124 451.1 524 46.8
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.8e-123 447.2 588 43.2
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 5.2e-123 445.7 533 46.3
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 1.5e-122 444.1 544 44.3
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 9.7e-122 441.4 476 48.5
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 2.8e-121 439.9 524 45.8
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 4.8e-121 439.1 502 47.0
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 6.3e-121 438.7 485 47.4
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 2.4e-120 436.8 546 44.1
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 3.1e-120 436.4 534 44.9
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 9.1e-120 434.9 532 46.6
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.2e-119 434.5 533 45.4
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.6e-119 434.1 388 55.2
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 2.0e-119 433.7 549 44.6
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.5e-117 427.6 533 44.8
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 7.2e-117 425.2 541 44.4
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 2.1e-116 423.7 502 46.0
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.1e-116 423.7 511 47.0
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 4.7e-116 422.5 613 41.9
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 4.7e-116 422.5 543 43.8
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.4e-115 421.0 543 45.7
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 3.0e-115 419.9 543 43.6
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 4.0e-115 419.5 548 44.3
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 4.0e-115 419.5 423 52.7
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 8.8e-115 418.3 470 45.7
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 1.2e-114 417.9 543 43.6
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.0e-114 417.2 535 44.3
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 3.7e-113 412.9 476 46.6
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 3.7e-113 412.9 560 42.3
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 7.0e-112 408.7 428 49.1
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.0e-110 404.8 534 43.8
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 1.3e-110 404.4 692 36.0
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.7e-110 404.1 507 44.6
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.5e-109 401.0 568 41.4
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.6e-108 397.5 444 47.1
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 3.0e-107 393.3 432 47.5
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.8e-105 386.7 356 53.9
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 4.9e-105 386.0 476 43.5
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 1.6e-103 380.9 494 43.7
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 8.6e-102 375.2 469 43.7
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 4.7e-100 369.4 437 46.2
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 4.0e-99 366.3 429 44.3
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 2.2e-97 360.5 561 39.2
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 4.9e-97 359.4 386 48.4
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 3.9e-94 349.7 509 41.7
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 6.6e-94 349.0 433 46.0
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.5e-93 345.1 396 46.5
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.8e-91 340.9 372 48.1
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 1.2e-90 338.2 555 38.2
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.0e-90 337.4 395 44.3
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 5.8e-90 335.9 380 47.6
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 7.5e-90 335.5 399 43.4
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 3.7e-89 333.2 377 45.1
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 8.3e-89 332.0 407 43.2
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 1.2e-87 328.2 396 45.7
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 6.8e-83 312.4 446 40.8
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.3e-77 293.5 278 52.9
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.6e-68 263.5 227 61.7
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.9e-64 251.1 328 41.8
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 2.4e-64 250.8 342 40.9
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 2.1e-63 247.7 534 31.8
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 7.8e-63 245.7 504 32.1
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 4.6e-47 193.4 232 44.8
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 7.9e-39 166.0 287 37.3
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.1e-35 155.6 219 40.2
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 3.2e-32 144.1 210 36.7
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 9.7e-29 132.5 387 29.7
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 6.7e-22 109.8 261 29.9
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 1.7e-20 105.1 216 30.1
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.2e-18 99.0 183 32.8
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.5e-18 98.6 155 36.1
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.7e-17 95.1 101 47.5
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.2e-17 94.7 101 47.5
Aqoxy4G01848 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 4.2e-16 90.5 89 50.6
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 1.8e-14 85.1 144 38.9
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.3e-12 79.0 106 43.4
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 1.6e-07 62.0 89 36.0
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.8e-06 58.5 251 26.3


User provided reference genes

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