Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 0.0e+00 1424.8 782 100.0
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 0.0e+00 1327.0 786 94.3
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 3.9e-164 582.8 828 52.3
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 4.9e-138 496.1 836 48.6
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 7.8e-136 488.8 825 48.2
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 1.9e-134 484.2 770 51.4
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 3.3e-134 483.4 845 47.3
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 5.6e-134 482.6 787 47.5
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 4.0e-132 476.5 837 46.7
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 5.8e-131 472.6 827 46.8
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 2.9e-130 470.3 840 45.7
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 8.3e-130 468.8 830 46.0
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 1.1e-129 468.4 845 47.0
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 3.2e-129 466.8 822 46.7
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 1.0e-127 461.8 828 46.3
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 1.2e-125 454.9 845 44.7
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 2.8e-125 453.8 827 45.5
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 1.1e-124 451.8 832 46.6
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 5.2e-124 449.5 832 45.3
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 8.9e-124 448.7 820 46.0
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 3.4e-123 446.8 817 45.2
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 7.5e-123 445.7 814 45.3
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 2.2e-122 444.1 830 45.3
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 2.2e-122 444.1 823 44.8
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 1.9e-121 441.0 821 45.3
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.4e-121 439.5 821 45.3
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 2.7e-120 437.2 840 45.1
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 2.7e-120 437.2 745 47.2
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 2.7e-120 437.2 810 45.1
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 3.5e-120 436.8 838 44.4
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.7e-119 434.5 832 44.7
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 2.3e-119 434.1 856 39.0
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 3.0e-119 433.7 780 45.6
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.1e-119 433.0 820 45.1
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 1.5e-118 431.4 793 45.5
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 7.3e-118 429.1 845 43.8
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 1.2e-117 428.3 787 45.6
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 4.7e-117 426.4 822 46.0
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 4.7e-117 426.4 833 45.0
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 1.4e-116 424.9 824 43.4
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 5.2e-116 422.9 822 45.9
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 1.2e-115 421.8 827 44.5
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 3.4e-115 420.2 833 44.1
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 7.6e-115 419.1 835 43.8
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 3.7e-114 416.8 795 44.7
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 6.4e-114 416.0 820 42.7
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 8.3e-114 415.6 819 44.2
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 1.1e-113 415.2 827 40.9
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 1.9e-113 414.5 829 44.8
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 1.9e-113 414.5 798 43.5
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 4.1e-113 413.3 833 43.7
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 7.1e-113 412.5 828 43.7
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 1.2e-112 411.8 821 43.7
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 2.1e-112 411.0 789 43.0
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 2.7e-112 410.6 764 44.1
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 2.3e-111 407.5 779 43.9
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 6.6e-111 406.0 763 44.6
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 2.5e-110 404.1 830 43.9
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 9.6e-110 402.1 829 42.8
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 1.6e-109 401.4 790 41.9
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 2.8e-109 400.6 790 41.9
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 8.1e-109 399.1 705 43.7
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 8.1e-109 399.1 757 44.8
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 1.1e-108 398.7 771 42.7
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 1.4e-108 398.3 734 45.6
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 4.0e-108 396.7 485 58.1
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 5.8e-107 392.9 726 45.5
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 7.6e-107 392.5 781 42.4
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 7.6e-107 392.5 626 43.5
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 1.7e-106 391.3 781 41.7
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 2.2e-106 391.0 826 41.5
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 8.4e-106 389.0 845 36.9
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 1.4e-105 388.3 815 42.7
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 2.4e-105 387.5 838 43.2
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 7.1e-105 386.0 702 44.4
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 7.1e-105 386.0 702 44.4
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 7.1e-105 386.0 775 44.5
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 2.3e-103 380.9 820 41.5
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.1e-101 374.4 816 42.4
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 2.8e-101 374.0 809 42.2
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 2.4e-100 370.9 792 41.7
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 7.1e-97 359.4 819 42.0
ATR1001G008 Amborella trichopoda HOM05D000237 ORTHO05D006530 1.6e-96 358.2 640 41.7
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 2.5e-94 350.9 805 40.0
CARHR021940 Cardamine hirsuta HOM05D000237 ORTHO05D006530 5.6e-94 349.7 617 40.8
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 1.3e-93 348.6 759 41.4
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 2.1e-93 347.8 918 37.6
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.8e-93 347.4 898 38.9
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 8.1e-93 345.9 788 39.7
AT1G21580 Arabidopsis thaliana HOM05D000237 ORTHO05D006530 7.6e-91 339.3 620 41.3
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 9.9e-91 339.0 778 40.7
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 4.9e-90 336.7 827 41.4
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 4.9e-90 336.7 812 40.0
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 2.4e-89 334.3 497 51.3
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 3.2e-89 334.0 815 40.1
SalBow7G2018 Salvia bowleyana HOM05D000237 ORTHO05D006530 9.3e-89 332.4 623 41.1
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 6.9e-84 316.2 465 50.8
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 3.2e-81 307.4 724 41.0
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 1.2e-80 305.4 757 40.7
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 1.6e-80 305.1 692 42.1
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 1.8e-79 301.6 811 37.6
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 2.3e-79 301.2 804 37.6
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 4.2e-73 280.4 493 40.2
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 1.6e-72 278.5 566 38.0
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 2.1e-72 278.1 800 38.2
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 2.1e-72 278.1 808 36.5
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 1.5e-70 271.9 652 41.1
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 1.6e-69 268.5 490 47.3
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 1.8e-68 265.0 336 55.4
Sed0005866 Sechium edule HOM05D000237 ORTHO05D006530 1.5e-67 261.9 604 38.2
SEGI_16153 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 7.2e-65 253.1 254 55.9
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 3.5e-51 207.6 296 54.1
Manes.18G083000 Manihot esculenta HOM05D000237 ORTHO05D006530 4.5e-51 207.2 520 36.9
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 5.5e-49 200.3 713 34.4
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 3.3e-46 191.0 528 35.4
CARHR070760 Cardamine hirsuta HOM05D000237 ORTHO05D006530 5.4e-36 157.1 209 44.5
TPR.G40837 Trifolium pratense HOM05D000237 ORTHO05D006530 3.4e-30 137.9 114 61.4
AUR62007706 Chenopodium quinoa HOM05D000237 ORTHO05D006530 4.4e-30 137.5 413 34.9
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 3.1e-28 131.3 81 76.5
PGSC0003DMG401025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 7.0e-28 130.2 421 32.5
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 3.8e-26 124.4 214 37.4
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 4.4e-22 110.9 564 33.0
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 4.9e-21 107.5 229 51.5
Oeu030983.1 Olea europaea HOM05D000237 ORTHO05D006530 5.0e-18 97.4 93 62.4
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 3.6e-16 91.3 758 23.5
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 2.0e-14 85.5 157 36.9
Lj4A681T41 Lonicera japonica HOM05D000237 ORTHO05D006530 1.3e-13 82.8 156 35.9
Oeu047172.1 Olea europaea HOM05D000237 ORTHO05D006530 2.2e-13 82.0 230 32.2
vmacro21124 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 2.4e-12 78.6 282 32.3
ATR0172G001 Amborella trichopoda HOM05D000237 ORTHO05D006530 3.5e-11 74.7 155 38.7
Oeu045950.1 Olea europaea HOM05D000237 ORTHO05D006530 1.3e-10 72.8 276 30.4
Sc20g0002720 Simmondsia chinensis HOM05D000237 ORTHO05D006530 6.8e-07 60.5 64 53.1


User provided reference genes

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