Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO528G0071 Papaver somniferum HOM05D000434 ORTHO05D005487 1.1e-137 493.4 273 100.0
PSO478G5095 Papaver somniferum HOM05D000434 ORTHO05D005487 8.5e-98 360.9 268 73.5
PSO478G4149 Papaver somniferum HOM05D000434 ORTHO05D005487 5.1e-50 202.2 310 46.8
PSO017G6446 Papaver somniferum HOM05D000434 ORTHO05D005487 2.1e-48 196.8 310 45.8
MBI19_g33767_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005487 3.3e-41 172.9 301 43.9
TAR374G1521 Trochodendron aralioides HOM05D000434 ORTHO05D005487 2.8e-40 169.9 297 41.4
Nn3g17801 Nelumbo nucifera HOM05D000434 ORTHO05D005487 9.0e-39 164.9 279 43.0
Dinv04482 Davidia involucrata HOM05D000434 ORTHO05D005487 1.5e-38 164.1 300 39.7
Nn4g23805 Nelumbo nucifera HOM05D000434 ORTHO05D005487 1.5e-38 164.1 286 42.0
Hma1.2p1_0030F.1_g018190 Hydrangea macrophylla HOM05D000434 ORTHO05D005487 2.0e-38 163.7 299 40.1
GSVIVG01011916001 Vitis vinifera HOM05D000434 ORTHO05D005487 3.4e-38 162.9 292 39.7
Aqoxy3G00326 Aquilegia oxysepala HOM05D000434 ORTHO05D005487 1.1e-36 157.9 296 39.2
CAN.G656.26 Capsicum annuum HOM05D000434 ORTHO05D005487 1.4e-36 157.5 257 41.2
QL01p043953 Quercus lobata HOM05D000434 ORTHO05D005487 4.2e-36 156.0 261 41.8
QL93p0130_0046 Quercus lobata HOM05D000434 ORTHO05D005487 4.2e-36 156.0 261 41.8
CiPaw.15G005700 Carya illinoinensis HOM05D000434 ORTHO05D005487 7.1e-36 155.2 270 42.2
Gorai.013G081700 Gossypium raimondii HOM05D000434 ORTHO05D005487 1.2e-35 154.5 278 41.7
Cfa018611 Carpinus fangiana HOM05D000434 ORTHO05D005487 1.6e-35 154.1 295 38.0
Gohir.D13G071400 Gossypium hirsutum HOM05D000434 ORTHO05D005487 1.6e-35 154.1 278 42.4
vmacro01373 Vaccinium macrocarpon HOM05D000434 ORTHO05D005487 2.1e-35 153.7 296 38.2
Gohir.A13G053900 Gossypium hirsutum HOM05D000434 ORTHO05D005487 7.8e-35 151.8 278 41.7
Peaxi162Scf00382g00219 Petunia axillaris HOM05D000434 ORTHO05D005487 1.0e-34 151.4 305 38.7
Solyc05g009540.3 Solanum lycopersicum HOM05D000434 ORTHO05D005487 2.3e-34 150.2 257 40.5
Sed0025596 Sechium edule HOM05D000434 ORTHO05D005487 3.0e-34 149.8 246 42.3
TPR.G26286 Trifolium pratense HOM05D000434 ORTHO05D005487 3.0e-34 149.8 272 40.1
Potri.010G126900 Populus trichocarpa HOM05D000434 ORTHO05D005487 3.9e-34 149.4 237 41.4
Duzib248G1356 Durio zibethinus HOM05D000434 ORTHO05D005487 6.6e-34 148.7 273 40.3
CiPaw.16G004900 Carya illinoinensis HOM05D000434 ORTHO05D005487 8.7e-34 148.3 250 41.2
Haze_17463 Corylus avellana HOM05D000434 ORTHO05D005487 8.7e-34 148.3 289 37.7
Thecc.02G357400 Theobroma cacao HOM05D000434 ORTHO05D005487 8.7e-34 148.3 277 40.4
vmacro10548 Vaccinium macrocarpon HOM05D000434 ORTHO05D005487 8.7e-34 148.3 246 42.3
Hund25082 Selenicereus undatus HOM05D000434 ORTHO05D005487 1.1e-33 147.9 297 38.7
EL10Ac6g14439 Beta vulgaris HOM05D000434 ORTHO05D005487 1.5e-33 147.5 258 42.6
Sed0007294 Sechium edule HOM05D000434 ORTHO05D005487 1.5e-33 147.5 248 39.9
ATR0665G319 Amborella trichopoda HOM05D000434 ORTHO05D005487 1.9e-33 147.1 272 39.0
Medtr1g111180 Medicago truncatula HOM05D000434 ORTHO05D005487 2.5e-33 146.7 262 41.2
Sopen05g005350 Solanum pennellii HOM05D000434 ORTHO05D005487 2.5e-33 146.7 295 37.3
Ciclev10030630m.g Citrus clementina HOM05D000434 ORTHO05D005487 4.3e-33 146.0 278 39.2
Cc11_g10310 Coffea canephora HOM05D000434 ORTHO05D005487 4.3e-33 146.0 285 36.8
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 9.6e-33 144.8 291 39.5
Nitab4.5_0004895g0050 Nicotiana tabacum HOM05D000434 ORTHO05D005487 9.6e-33 144.8 300 36.3
CSS0003031 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005487 1.3e-32 144.4 246 39.0
Dinv21107 Davidia involucrata HOM05D000434 ORTHO05D005487 1.3e-32 144.4 299 37.1
Phvul.007G026100 Phaseolus vulgaris HOM05D000434 ORTHO05D005487 1.3e-32 144.4 246 42.7
Ca_11184_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005487 2.1e-32 143.7 298 38.3
Actinidia16640 Actinidia chinensis HOM05D000434 ORTHO05D005487 2.8e-32 143.3 236 41.5
Lj5g0000210 Lotus japonicus HOM05D000434 ORTHO05D005487 2.8e-32 143.3 271 39.9
Psat6g229160 Pisum sativum HOM05D000434 ORTHO05D005487 2.8e-32 143.3 289 38.8
Sabra10G0096400 Salix brachista HOM05D000434 ORTHO05D005487 2.8e-32 143.3 302 36.8
SEGI_05979 Sequoiadendron giganteum HOM05D000434 ORTHO05D005487 6.2e-32 142.1 262 38.2
Nitab4.5_0003823g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005487 8.1e-32 141.7 310 35.2
Cpa.g.c32989 Carica papaya HOM05D000434 ORTHO05D005487 1.1e-31 141.4 273 44.0
Lalb_Chr21g0309021 Lupinus albus HOM05D000434 ORTHO05D005487 1.1e-31 141.4 263 38.8
CSS0003626 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005487 1.4e-31 141.0 295 36.6
VMungo0720G1375 Vigna mungo HOM05D000434 ORTHO05D005487 1.4e-31 141.0 247 42.1
Atru.chr11.1294 Acer truncatum HOM05D000434 ORTHO05D005487 3.1e-31 139.8 264 40.5
SGA_v2.0_scaffold124G33549 Striga asiatica HOM05D000434 ORTHO05D005487 3.1e-31 139.8 276 37.3
COL.COLO4_07904 Corchorus olitorius HOM05D000434 ORTHO05D005487 5.3e-31 139.0 306 38.6
Oeu033298.1 Olea europaea HOM05D000434 ORTHO05D005487 6.9e-31 138.7 300 36.0
Lalb_Chr02g0146071 Lupinus albus HOM05D000434 ORTHO05D005487 9.0e-31 138.3 301 36.2
HanXRQChr08g0214201 Helianthus annuus HOM05D000434 ORTHO05D005487 1.2e-30 137.9 322 35.7
AUR62002892 Chenopodium quinoa HOM05D000434 ORTHO05D005487 1.5e-30 137.5 286 38.8
CsaV3_5G034190 Cucumis sativus L. HOM05D000434 ORTHO05D005487 7.6e-30 135.2 246 38.6
Sabra08G0090400 Salix brachista HOM05D000434 ORTHO05D005487 9.9e-30 134.8 280 36.4
Potri.008G119100 Populus trichocarpa HOM05D000434 ORTHO05D005487 1.3e-29 134.4 320 33.8
HPP92_009435 Vanilla planifolia HOM05D000434 ORTHO05D005487 1.3e-29 134.4 312 34.6
CDE05G2965 Ceratophyllum demersum HOM05D000434 ORTHO05D005487 1.7e-29 134.0 302 37.1
Rhsim09G0109700 Rhododendron simsii HOM05D000434 ORTHO05D005487 1.7e-29 134.0 270 38.5
arahy.Tifrunner.gnm1.ann1.11CPHY Arachis hypogaea HOM05D000434 ORTHO05D005487 2.2e-29 133.7 296 36.1
AUR62035250 Chenopodium quinoa HOM05D000434 ORTHO05D005487 3.8e-29 132.9 261 41.0
DCAR_026727 Daucus carota HOM05D000434 ORTHO05D005487 3.8e-29 132.9 276 39.1
Glyma.01G082700 Glycine max HOM05D000434 ORTHO05D005487 3.8e-29 132.9 296 36.1
ClCG05G022840 Citrullus lanatus HOM05D000434 ORTHO05D005487 8.4e-29 131.7 246 37.8
DCAR_007234 Daucus carota HOM05D000434 ORTHO05D005487 8.4e-29 131.7 304 36.2
Oeu057624.1 Olea europaea HOM05D000434 ORTHO05D005487 1.1e-28 131.3 309 34.3
Migut.E00325 Erythranthe guttata HOM05D000434 ORTHO05D005487 1.4e-28 131.0 279 35.5
AT1G13350 Arabidopsis thaliana HOM05D000434 ORTHO05D005487 1.9e-28 130.6 254 35.8
PGSC0003DMG400012975 Solanum tuberosum HOM05D000434 ORTHO05D005487 1.9e-28 130.6 293 35.8
MELO3C012233.2 Cucumis melo HOM05D000434 ORTHO05D005487 2.4e-28 130.2 236 40.7
THA.LOC104825736 Tarenaya hassleriana HOM05D000434 ORTHO05D005487 2.4e-28 130.2 262 38.5
Prupe.1G308700 Prunus persica HOM05D000434 ORTHO05D005487 3.2e-28 129.8 252 35.3
Sc04g0006550 Simmondsia chinensis HOM05D000434 ORTHO05D005487 3.2e-28 129.8 284 39.8
AL5G14460 Arabidopsis lyrata HOM05D000434 ORTHO05D005487 4.2e-28 129.4 272 37.1
Migut.L01078 Erythranthe guttata HOM05D000434 ORTHO05D005487 4.2e-28 129.4 298 35.6
Lj3A1017G50 Lonicera japonica HOM05D000434 ORTHO05D005487 5.4e-28 129.0 107 61.7
CDE11G0725 Ceratophyllum demersum HOM05D000434 ORTHO05D005487 7.1e-28 128.6 283 37.5
Lj6A761T52 Lonicera japonica HOM05D000434 ORTHO05D005487 1.2e-27 127.9 109 60.6
Thhalv10003622m.g Eutrema salsugineum HOM05D000434 ORTHO05D005487 2.1e-27 127.1 264 37.9
FAN07G0245 Fragaria x ananassa HOM05D000434 ORTHO05D005487 3.5e-27 126.3 268 36.6
Glyma.10G275400 Glycine max HOM05D000434 ORTHO05D005487 4.6e-27 125.9 184 42.9
AT3G25840 Arabidopsis thaliana HOM05D000434 ORTHO05D005487 6.0e-27 125.6 303 35.6
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 6.0e-27 125.6 257 37.7
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 6.0e-27 125.6 257 37.7
Pp3c9_3840 Physcomitrium patens HOM05D000434 ORTHO05D005487 6.0e-27 125.6 117 59.0
BcaB07g30630 Brassica carinata HOM05D000434 ORTHO05D005487 7.9e-27 125.2 253 38.7
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 7.9e-27 125.2 250 36.4
Glyma.20G114300 Glycine max HOM05D000434 ORTHO05D005487 7.9e-27 125.2 287 40.4
Sp2g15070 Schrenkiella parvula HOM05D000434 ORTHO05D005487 7.9e-27 125.2 251 39.4
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 1.0e-26 124.8 257 37.7
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.8e-26 124.0 250 36.0
Lalb_Chr17g0342041 Lupinus albus HOM05D000434 ORTHO05D005487 1.8e-26 124.0 168 44.6
Pp3c15_9260 Physcomitrium patens HOM05D000434 ORTHO05D005487 1.8e-26 124.0 112 60.7
Aa31LG2G6510 Aethionema arabicum HOM05D000434 ORTHO05D005487 2.3e-26 123.6 266 35.7
Mapoly0105s0003 Marchantia polymorpha HOM05D000434 ORTHO05D005487 2.3e-26 123.6 253 36.8
TAR622G0556 Trochodendron aralioides HOM05D001644 ORTHO05D005487 2.3e-26 123.6 107 59.8
unitig_699.g19888 Utricularia gibba HOM05D000434 ORTHO05D005487 2.3e-26 123.6 266 39.1
RcHm_v2.0_Chr4g0435481 Rosa chinensis HOM05D000434 ORTHO05D005487 3.0e-26 123.2 267 33.7
Carub.0005s0367 Capsella rubella HOM05D000434 ORTHO05D005487 3.9e-26 122.9 229 38.4
ECA233G3886 Erigeron canadensis HOM05D000434 ORTHO05D005487 5.1e-26 122.5 317 35.0
Lsat_1_v5_gn_8_39220 Lactuca sativa HOM05D000434 ORTHO05D005487 5.1e-26 122.5 324 33.3
Aa31LG1G1500 Aethionema arabicum HOM05D000434 ORTHO05D005487 6.7e-26 122.1 263 34.2
MD13G1043800 Malus domestica HOM05D000434 ORTHO05D005487 6.7e-26 122.1 249 38.6
Phvul.003G043900 Phaseolus vulgaris HOM05D000434 ORTHO05D005487 6.7e-26 122.1 297 34.0
FAN12G0546 Fragaria x ananassa HOM05D000434 ORTHO05D005487 1.5e-25 120.9 290 34.8
AagrBONN_evm.TU.Sc2ySwM_368.1606 Anthoceros agrestis HOM05D000434 ORTHO05D005487 1.9e-25 120.6 273 35.9
Rhsim12G0082600 Rhododendron simsii HOM05D000434 ORTHO05D005487 1.9e-25 120.6 288 35.8
BolC7t44018H Brassica oleracea HOM05D000434 ORTHO05D005487 2.5e-25 120.2 141 50.4
Eucgr.B03029 Eucalyptus grandis HOM05D000434 ORTHO05D005487 2.5e-25 120.2 157 45.9
FvH4_4g27640 Fragaria vesca HOM05D000434 ORTHO05D005487 3.3e-25 119.8 290 34.5
MD16G1044600 Malus domestica HOM05D000434 ORTHO05D005487 5.6e-25 119.0 249 37.8
AL5G34610 Arabidopsis lyrata HOM05D000434 ORTHO05D005487 7.4e-25 118.6 245 37.1
BcaC06g31112 Brassica carinata HOM05D000434 ORTHO05D005487 2.1e-24 117.1 260 35.0
Manes.06G070200 Manihot esculenta HOM05D000434 ORTHO05D005487 2.1e-24 117.1 286 33.9
BcaC06g33949 Brassica carinata HOM05D000434 ORTHO05D005487 2.8e-24 116.7 273 34.1
C07p34860 Brassica napus HOM05D000434 ORTHO05D005487 2.8e-24 116.7 273 34.1
Zm00001eb133880 Zea mays HOM05D000434 ORTHO05D005487 3.7e-24 116.3 167 41.3
CARHR013730 Cardamine hirsuta HOM05D000434 ORTHO05D005487 4.8e-24 115.9 243 37.0
FAN22G2294 Fragaria x ananassa HOM05D000434 ORTHO05D005487 4.8e-24 115.9 287 32.8
ECA233G4697 Erigeron canadensis HOM05D000434 ORTHO05D005487 1.1e-23 114.8 322 34.2
SMO367G0988 Selaginella moellendorffii HOM05D000434 ORTHO05D005487 1.1e-23 114.8 231 37.7
A06p42450 Brassica napus HOM05D000434 ORTHO05D005487 1.4e-23 114.4 254 35.0
BraA06t27160Z Brassica rapa HOM05D000434 ORTHO05D005487 1.4e-23 114.4 254 35.0
AT3G53640 Arabidopsis thaliana HOM05D000434 ORTHO05D005487 2.4e-23 113.6 225 37.3
Sopen06g002630 Solanum pennellii HOM05D000434 ORTHO05D005487 2.4e-23 113.6 107 57.0
Aqoxy5G04205 Aquilegia oxysepala HOM05D000434 ORTHO05D005487 9.0e-23 111.7 94 62.8
MSTRG.825 Avicennia marina HOM05D000434 ORTHO05D005487 3.4e-22 109.8 293 32.1
CBR_g38502 Chara braunii HOM05D000019 ORTHO05D000002 5.8e-22 109.0 105 54.3
Lsat_1_v5_gn_9_72680 Lactuca sativa HOM05D000434 ORTHO05D005487 5.8e-22 109.0 107 57.0
Carub.0005s2022 Capsella rubella HOM05D000434 ORTHO05D005487 1.7e-21 107.5 275 33.1
Zm00001eb033230 Zea mays HOM05D000434 ORTHO05D005487 2.2e-21 107.1 296 32.1
PGSC0003DMG400020660 Solanum tuberosum HOM05D000434 ORTHO05D005487 1.9e-20 104.0 390 29.5
Lsat_1_v5_gn_3_119060 Lactuca sativa HOM05D000434 ORTHO05D005487 1.3e-18 97.8 94 58.5
Os03g0710100 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005487 3.0e-18 96.7 105 46.7
HanXRQChr02g0058741 Helianthus annuus HOM05D000434 ORTHO05D005487 2.8e-16 90.1 107 52.3
PRCOL_00003126 Prasinoderma coloniale HOM05D000055 ORTHO05D005487 4.8e-16 89.4 121 42.1
MCO06G297 Micromonas commoda HOM05D000434 ORTHO05D005487 8.2e-16 88.6 98 48.0
FAN12G0730 Fragaria x ananassa HOM05D000434 ORTHO05D005487 1.1e-15 88.2 293 32.1
Haze_26846 Corylus avellana HOM05D000434 ORTHO05D005487 7.1e-12 75.5 91 44.0
Cre06.g248850 Chlamydomonas reinhardtii HOM05D000434 ORTHO05D005487 1.2e-11 74.7 130 36.2
Manes.14G100300 Manihot esculenta HOM05D000434 ORTHO05D250837 8.7e-10 68.6 181 34.8
SMO351G0350 Selaginella moellendorffii HOM05D000434 ORTHO05D005487 1.3e-08 64.7 95 40.0
Cfa026059 Carpinus fangiana HOM05D000434 ORTHO05D005487 2.8e-08 63.5 93 41.9
SMO351G0064 Selaginella moellendorffii HOM05D001644 ORTHO05D005487 2.8e-08 63.5 95 40.0


User provided reference genes

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