Gene: AT3G25840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G25840
  • Transcript Identifier AT3G25840.1
  • Gene Type Coding gene
  • Location Chr3 : 9452993-9457446 : negative

Gene Family Information

  • ID HOM05D000434
  • #Genes/#Species 1193/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G25840.1
  • uniprot Q8RWN3

Descriptions

  • Description Protein kinase superfamily protein
  • Computational description Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G13350.1); Has 159605 Blast hits to 120248 proteins in 3358 species: Archae - 256; Bacteria - 15698; Metazoa - 69851; Fungi - 20258; Plants - 17457; Viruses - 788; Other Eukaryotes - 35297 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045292
IEA
Gene OntologymRNA cis splicing, via spliceosome
GO:0045292
IEA
InterPromRNA cis splicing, via spliceosome
GO:0006468
IBA
IEA
Gene Ontologyprotein phosphorylation1
GO:0006468
IEA
InterProprotein phosphorylation
GO:0016310
IEA
GOA Databasephosphorylation
GO:0008380
IMP
Gene OntologyRNA splicing2
GO:0000380
IMP
Gene Ontologyalternative mRNA splicing, via spliceosome2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0004674
IEA
InterProprotein serine/threonine kinase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0106311
IEA
Gene Ontologyprotein threonine kinase activity
GO:0106310
IEA
Gene Ontologyprotein serine kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
ISM, IBA
Gene Ontologynucleus1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011009 Protein kinase-like domain superfamily
IPR000719 Protein kinase domain
IPR044092 Serine/threonine-protein PRP4, catalytic domain
Mapman id Description
16.2.6.8 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing regulatory kinase (PRP4K)
18.4.3.3 Protein modification.phosphorylation.CMGC protein kinase superfamily.protein kinase (DYRK)