Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 5.2e-273 943.7 458 100.0
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 1.3e-255 885.9 458 94.1
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 5.2e-108 395.6 454 47.1
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.9e-105 387.1 451 45.5
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 6.0e-104 382.1 459 44.4
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 7.3e-102 375.2 461 43.4
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 1.6e-101 374.0 463 43.8
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 4.7e-101 372.5 459 45.8
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 4.7e-101 372.5 459 45.8
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 8.4e-98 361.7 455 43.1
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 4.2e-97 359.4 458 43.7
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 1.6e-96 357.5 459 43.4
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 3.5e-96 356.3 454 41.9
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 3.0e-95 353.2 459 42.9
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 6.6e-95 352.1 458 41.9
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 1.9e-94 350.5 457 42.9
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 2.5e-94 350.1 447 43.2
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 4.3e-94 349.4 459 42.0
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 7.3e-94 348.6 459 44.0
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 9.6e-94 348.2 461 43.2
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 1.4e-92 344.4 461 42.1
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 2.4e-92 343.6 458 41.0
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 1.5e-91 340.9 427 43.6
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 4.5e-91 339.3 470 42.8
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 2.9e-90 336.7 456 40.1
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 1.1e-89 334.7 456 40.4
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 2.4e-89 333.6 457 39.2
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 3.2e-89 333.2 456 40.6
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 7.1e-89 332.0 458 40.0
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 7.1e-89 332.0 453 41.3
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 1.6e-88 330.9 457 40.5
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 2.1e-88 330.5 457 40.7
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 2.7e-88 330.1 450 41.1
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 7.9e-88 328.6 460 42.0
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 7.9e-88 328.6 378 48.9
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 1.0e-87 328.2 460 42.0
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 6.7e-87 325.5 509 38.7
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 6.7e-87 325.5 455 40.7
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.9e-86 323.9 456 41.9
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 2.5e-86 323.6 458 40.8
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 2.5e-86 323.6 456 39.5
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 5.6e-86 322.4 458 39.5
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 9.6e-86 321.6 404 43.6
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 3.7e-85 319.7 455 40.0
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 8.1e-85 318.5 452 39.6
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 6.9e-84 315.5 457 39.4
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 1.2e-83 314.7 457 38.5
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 3.4e-83 313.2 542 36.3
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 5.8e-83 312.4 522 37.2
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 9.9e-83 311.6 458 39.1
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 2.4e-81 307.0 387 43.9
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 7.1e-81 305.4 465 38.5
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 1.8e-79 300.8 469 37.3
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 4.8e-77 292.7 481 36.8
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 9.0e-76 288.5 459 39.0
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 2.6e-75 287.0 449 36.1
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 2.6e-75 287.0 465 38.1
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 1.3e-74 284.6 461 37.7
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 2.2e-74 283.9 460 36.1
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 3.5e-72 276.6 450 36.7
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 4.6e-72 276.2 455 37.1
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 7.9e-72 275.4 456 37.7
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 1.0e-71 275.0 444 37.2
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.3e-71 274.6 463 37.1
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 1.3e-71 274.6 461 37.1
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 2.3e-71 273.9 451 36.4
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 8.7e-71 271.9 463 36.7
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 8.7e-71 271.9 459 36.8
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 9.7e-70 268.5 457 36.5
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 2.2e-69 267.3 459 35.5
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 3.7e-69 266.5 463 36.7
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 1.1e-68 265.0 448 35.5
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 1.1e-68 265.0 480 34.2
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.4e-68 264.6 459 35.9
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.1e-68 263.5 459 35.7
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 4.5e-67 259.6 451 35.0
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 7.6e-67 258.8 422 38.4
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 1.0e-66 258.5 464 34.1
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 1.3e-66 258.1 460 37.2
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 1.7e-66 257.7 463 34.1
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 1.7e-66 257.7 453 35.3
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.7e-66 257.7 460 37.2
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 2.2e-66 257.3 459 37.3
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 8.5e-66 255.4 414 37.4
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 8.5e-66 255.4 451 34.8
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 8.5e-66 255.4 411 36.7
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 2.5e-65 253.8 451 34.8
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 5.5e-65 252.7 430 36.0
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 5.5e-65 252.7 460 36.7
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 9.4e-65 251.9 471 35.0
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 1.8e-63 247.7 450 35.6
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.1e-62 245.0 462 36.4
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 2.5e-62 243.8 385 38.2
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 4.3e-62 243.0 459 33.8
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 4.3e-62 243.0 378 38.1
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 7.4e-62 242.3 455 35.2
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 7.4e-62 242.3 457 35.2
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 9.7e-62 241.9 465 33.8
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 9.7e-62 241.9 371 36.4
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.3e-61 241.5 451 34.8
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.7e-61 241.1 456 36.0
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 6.3e-61 239.2 495 34.7
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.8e-60 237.7 467 33.2
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 1.8e-60 237.7 468 34.8
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 1.8e-60 237.7 468 34.8
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 2.4e-60 237.3 452 34.5
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 2.4e-60 237.3 485 34.0
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 3.1e-60 236.9 455 33.8
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 3.1e-60 236.9 455 34.5
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 3.1e-60 236.9 456 34.6
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 2.0e-59 234.2 455 35.6
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 5.9e-59 232.6 388 35.8
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 8.5e-58 228.8 493 33.9
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 1.1e-57 228.4 472 32.8
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 1.1e-57 228.4 455 33.8
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 3.6e-56 223.4 308 42.5
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 7.9e-56 222.2 468 31.0
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 1.4e-55 221.5 268 46.6
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 2.3e-55 220.7 461 31.7
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 8.8e-55 218.8 458 32.8
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 2.6e-54 217.2 295 41.4
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 7.4e-54 215.7 456 32.7
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 7.4e-54 215.7 456 33.1
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 7.4e-54 215.7 456 33.1
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 2.8e-53 213.8 461 32.8
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 6.3e-53 212.6 456 32.7
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 5.0e-50 203.0 455 32.5
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 6.5e-50 202.6 455 32.1
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 6.5e-50 202.6 495 31.1
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 1.4e-49 201.4 471 32.1
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 3.2e-49 200.3 309 38.5
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 1.0e-47 195.3 427 31.6
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 1.4e-47 194.9 309 39.8
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 1.1e-46 191.8 245 46.5
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 7.4e-46 189.1 335 35.8
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 2.2e-45 187.6 312 34.0
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 2.8e-45 187.2 506 30.4
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 9.1e-44 182.2 430 30.0
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 2.9e-42 177.2 295 38.3
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 2.1e-40 171.0 244 38.1
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.8e-39 167.9 312 33.3
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 1.7e-34 151.4 240 37.1
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 9.4e-33 145.6 136 52.9
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 2.0e-30 137.9 298 32.9
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 2.6e-30 137.5 185 44.9
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 1.4e-28 131.7 126 51.6
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 4.1e-28 130.2 199 40.2
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 6.1e-24 116.3 343 25.9
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 1.5e-22 111.7 253 26.5
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 1.2e-19 102.1 140 37.1
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.1e-17 95.5 136 36.8
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 9.5e-17 92.4 195 31.3
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 7.0e-12 76.3 120 36.7
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 2.0e-11 74.7 114 39.5
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 3.9e-10 70.5 111 41.4
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 1.1e-07 62.4 102 34.3
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 1.8e-07 61.6 81 35.8
Lj1g0024684 Lotus japonicus HOM05D004162 ORTHO05D004543 3.1e-07 60.8 59 50.8
Haze_09935 Corylus avellana HOM05D001513 ORTHO05D004543 8.9e-07 59.3 62 46.8
QL10p030172 Quercus lobata HOM05D004162 ORTHO05D004543 2.0e-06 58.2 66 43.9


User provided reference genes

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