Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 0.0e+00 1119.4 602 100.0
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 1.1e-310 1069.3 602 95.5
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 8.2e-202 707.6 554 67.5
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 3.7e-194 682.2 529 67.9
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 2.6e-147 526.6 533 53.7
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 4.9e-146 522.3 556 52.7
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 7.8e-144 515.0 560 51.2
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 1.3e-143 514.2 557 52.6
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.9e-142 510.4 559 52.6
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.8e-141 506.5 592 48.5
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 1.4e-140 504.2 554 50.4
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 3.1e-140 503.1 572 50.2
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 8.9e-140 501.5 554 50.9
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 7.5e-139 498.4 561 51.3
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 2.7e-136 490.0 592 48.0
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.0e-135 488.0 555 50.3
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 1.7e-135 487.3 555 49.7
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 1.5e-134 484.2 590 47.3
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 4.3e-134 482.6 558 50.0
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.7e-130 470.7 555 47.9
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 2.2e-130 470.3 552 49.3
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.2e-130 470.3 550 48.2
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 2.9e-130 469.9 553 48.6
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 6.4e-130 468.8 553 49.4
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.9e-129 467.2 561 49.6
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 5.4e-129 465.7 551 49.4
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.7e-128 463.4 558 48.4
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.7e-128 463.4 558 48.4
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.3e-127 461.1 592 45.8
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 6.6e-127 458.8 546 48.7
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 8.6e-127 458.4 555 47.7
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 8.6e-127 458.4 555 47.6
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 1.8e-124 450.7 556 46.9
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.2e-124 449.1 553 46.7
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 6.9e-124 448.7 551 46.6
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 1.5e-123 447.6 560 47.0
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.0e-123 447.2 551 49.2
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 3.4e-123 446.4 549 47.2
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 5.8e-123 445.7 553 45.8
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 5.8e-123 445.7 550 48.5
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 5.8e-123 445.7 550 47.3
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 1.7e-122 444.1 574 45.1
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 2.2e-122 443.7 561 46.3
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 2.2e-122 443.7 556 46.0
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 4.9e-122 442.6 549 47.2
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-121 441.0 557 45.1
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 2.4e-121 440.3 549 46.1
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.2e-121 439.9 557 44.7
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 4.2e-121 439.5 555 45.6
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 7.1e-121 438.7 550 45.6
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.2e-120 438.0 571 46.1
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 1.6e-120 437.6 550 46.0
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 1.6e-120 437.6 557 45.1
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 7.8e-120 435.3 434 56.2
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 2.3e-119 433.7 569 45.3
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 2.3e-119 433.7 539 47.5
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 3.9e-119 433.0 555 46.7
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 5.1e-119 432.6 557 44.2
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 5.1e-119 432.6 553 45.2
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 6.6e-119 432.2 556 44.4
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.5e-118 431.0 557 44.2
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 1.5e-118 431.0 547 45.3
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 7.3e-118 428.7 554 47.7
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 1.3e-117 427.9 564 45.6
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.3e-117 427.9 553 45.0
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.3e-117 427.9 557 43.6
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.3e-117 427.9 557 43.6
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.8e-117 426.8 557 43.8
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 1.4e-116 424.5 553 44.7
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 1.2e-115 421.4 552 45.1
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 1.2e-115 421.4 624 43.3
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 1.5e-115 421.0 552 44.4
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 4.5e-115 419.5 555 45.0
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 7.6e-115 418.7 549 44.3
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 2.9e-114 416.8 568 44.2
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.9e-114 416.0 553 45.2
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 8.4e-114 415.2 568 43.0
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 8.4e-114 415.2 559 44.5
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 1.2e-112 411.4 545 45.9
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 2.1e-112 410.6 548 46.4
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 5.1e-111 406.0 552 42.6
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 3.3e-110 403.3 553 42.9
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 4.3e-110 402.9 550 43.5
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.1e-109 400.6 559 42.9
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.4e-108 397.9 567 43.9
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 2.4e-108 397.1 550 43.1
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 5.8e-107 392.5 548 43.1
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 3.8e-106 389.8 511 43.8
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 4.9e-106 389.4 553 42.3
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 4.9e-106 389.4 549 43.4
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 9.3e-105 385.2 554 42.2
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 2.7e-104 383.6 554 42.1
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 3.5e-104 383.3 443 48.8
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 1.8e-103 380.9 553 40.3
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.3e-103 380.6 554 41.7
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 3.9e-103 379.8 547 41.9
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 7.4e-102 375.6 554 40.6
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 2.1e-101 374.0 552 41.7
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.1e-101 374.0 553 41.8
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 2.8e-101 373.6 554 40.8
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 2.8e-101 373.6 550 41.1
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 2.4e-100 370.5 550 40.4
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 5.3e-100 369.4 554 43.0
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.5e-99 367.9 363 57.9
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 2.0e-99 367.5 554 40.3
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.8e-99 365.9 389 52.4
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 5.8e-99 365.9 548 40.5
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 1.7e-98 364.4 554 40.3
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 2.2e-98 364.0 570 39.6
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 2.2e-98 364.0 554 40.1
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 3.2e-97 360.1 558 39.8
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 2.1e-96 357.5 550 40.4
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 3.0e-95 353.6 553 42.0
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 7.4e-94 349.0 554 39.0
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 9.0e-92 342.0 365 51.5
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 1.0e-90 338.6 453 43.7
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 2.5e-89 334.0 444 46.6
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 4.6e-88 329.7 438 45.2
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 4.6e-88 329.7 551 39.4
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 6.1e-88 329.3 458 43.7
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 1.3e-87 328.2 547 38.9
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 5.1e-87 326.2 439 41.7
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.4e-84 318.2 265 65.7
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 5.3e-84 316.2 441 45.1
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.2e-77 294.3 547 34.7
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 2.2e-74 284.3 560 34.1
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 3.6e-72 276.9 438 39.3
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.2e-69 267.7 419 40.3
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 6.3e-69 266.2 262 55.3
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.5e-67 260.4 327 48.3
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 5.3e-60 236.5 250 51.6
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 1.8e-52 211.5 364 37.6
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 3.5e-51 207.2 374 36.1
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 3.0e-47 194.1 435 30.8
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 4.1e-44 183.7 248 41.9
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 2.1e-40 171.4 536 27.1
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 8.9e-39 166.0 524 26.1
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.6e-38 164.5 224 43.3
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.4e-37 159.8 152 59.2
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.8e-36 158.3 152 59.2
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.2e-32 145.6 164 49.4
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.8e-32 144.4 150 46.0
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 2.8e-32 144.4 526 25.3
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.6e-32 144.1 190 47.9
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.1e-31 142.5 231 37.2
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 4.0e-31 140.6 161 45.3
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 1.2e-30 139.0 554 24.0
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 1.0e-26 125.9 151 47.7
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 5.0e-26 123.6 139 51.1
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 5.6e-25 120.2 135 47.4
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.6e-24 118.6 131 47.3
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.1e-24 118.2 116 54.3
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 8.1e-24 116.3 157 37.6
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 9.9e-22 109.4 101 60.4
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 2.2e-21 108.2 587 23.2
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 9.2e-20 102.8 525 23.8
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 1.0e-18 99.4 85 60.0
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.3e-18 99.0 123 45.5
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.3e-18 99.0 163 39.3
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 3.0e-18 97.8 101 54.5
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 3.9e-18 97.4 232 30.2
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 5.1e-18 97.1 162 39.5
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 4.7e-16 90.5 130 42.3
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.1e-15 87.8 100 51.0
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 5.2e-15 87.0 111 43.2
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 8.9e-15 86.3 487 22.0
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 4.4e-14 84.0 90 50.0
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 7.6e-14 83.2 70 68.6
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 7.6e-14 83.2 134 38.1
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 9.9e-14 82.8 188 29.8
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 1.3e-13 82.4 123 38.2
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 6.4e-13 80.1 111 40.5
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.9e-12 78.6 73 57.5
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 1.6e-11 75.5 121 40.5
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.7e-10 72.0 80 56.2
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.3e-10 71.6 65 56.9
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.3e-10 71.6 65 56.9
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 1.2e-08 65.9 82 37.8
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 6.9e-07 60.1 53 58.5
GSVIVG01023070001 Vitis vinifera HOM05D003578 ORTHO05D004021 9.9e-06 56.2 55 49.1


User provided reference genes

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