Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 3043.1 1756 100.0
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 2868.2 1756 94.4
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1758.4 1841 59.5
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1643.6 1828 55.6
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1602.0 1789 56.5
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1543.5 1802 56.1
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1505.7 1713 54.6
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1478.8 1802 54.6
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1445.6 1790 53.9
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1445.3 1801 53.9
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1434.1 1589 60.0
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1433.7 1823 52.5
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1424.8 1798 51.1
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1418.7 1797 53.1
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1394.4 1804 52.4
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1365.9 1822 51.9
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1362.8 1413 59.8
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1361.7 1823 53.2
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1361.3 1815 53.3
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1360.5 1818 53.2
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1357.4 1818 53.1
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1357.0 1810 51.8
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1348.6 1811 53.1
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1338.9 1819 50.5
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1338.9 1826 50.5
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1338.2 1822 49.6
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1332.0 1803 49.8
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1321.2 1798 51.1
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1320.8 1806 50.3
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1319.3 1819 50.0
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1312.4 1785 49.7
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1310.0 1801 50.3
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1307.0 1821 48.9
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1304.7 1801 50.0
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1298.9 1518 55.5
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1296.2 1826 49.5
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1293.1 1800 49.9
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1292.3 1800 49.8
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1290.8 1811 49.0
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1290.8 1817 48.9
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1289.6 1801 49.8
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1288.1 1636 51.9
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1284.2 1810 49.7
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1277.3 1937 46.6
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1274.2 1619 52.4
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1273.8 1592 53.8
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1273.5 1819 48.4
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1271.5 1811 49.0
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1263.4 1806 49.2
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1258.4 1829 48.5
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1258.0 1630 51.6
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1246.9 1613 51.7
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1241.1 1800 45.9
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1239.2 1889 47.9
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1234.2 1365 55.8
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1232.2 1802 48.5
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1221.8 1589 51.2
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1221.8 1800 47.4
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1214.9 1538 52.0
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1210.3 1789 47.8
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1204.9 1468 54.1
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1201.8 1353 54.5
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1183.3 1205 61.4
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1175.6 1629 49.8
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1129.0 1261 57.7
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 0.0e+00 1118.2 1285 57.7
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 0.0e+00 1112.8 1246 60.0
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1095.9 1260 56.2
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1084.7 1852 42.1
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1080.5 1260 55.6
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 1.7e-308 1063.5 916 66.0
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 3.8e-308 1062.4 1356 52.2
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 5.7e-304 1048.5 1413 51.1
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 1.3e-300 1037.3 1383 50.1
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 4.6e-277 959.1 1313 50.3
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 1.1e-275 954.5 1574 45.1
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.5e-275 951.4 916 62.4
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 4.1e-254 882.9 816 61.8
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 3.0e-252 876.7 1041 55.8
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.1e-246 858.2 1363 46.4
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 6.6e-236 822.4 1135 48.8
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 7.4e-235 818.9 1618 40.5
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 2.5e-227 793.9 1215 47.1
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 1.7e-162 578.6 833 44.9
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 1.8e-161 575.1 858 50.6
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.1e-149 535.0 555 59.1
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.2e-128 466.1 1140 33.9
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 5.6e-126 457.2 830 41.4
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.3e-119 435.3 532 53.4
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.2e-114 418.7 818 40.3
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.6e-88 331.6 714 37.0
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.0e-71 276.9 819 33.5
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 2.6e-70 272.3 265 59.6
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 7.7e-67 260.8 242 61.2
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 5.5e-57 228.0 222 61.3
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.7e-50 206.5 232 52.2
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 1.0e-47 197.2 574 31.5
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.6e-40 173.3 168 59.5
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 1.5e-38 166.8 150 58.7
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.4e-38 165.2 170 61.8
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 4.9e-37 161.8 142 62.0
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 8.6e-34 151.0 1320 23.4
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 4.3e-33 148.7 273 37.4
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.5e-33 147.5 152 58.6
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.3e-31 142.9 270 40.0
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 3.9e-26 125.6 134 56.7
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 9.5e-25 120.9 228 32.5
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.6e-24 120.2 192 43.2
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 3.4e-22 112.5 276 30.1
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.1e-17 97.4 157 40.1
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-16 92.0 68 57.4
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 4.7e-16 92.0 83 60.2
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 4.4e-14 85.5 79 55.7
Actinidia09210 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.8e-08 65.5 183 32.2
Nn1g01396 Nelumbo nucifera HOM05D001674 ORTHO05D008599 1.8e-07 63.5 51 66.7
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-07 62.4 107 37.4


User provided reference genes

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