Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3469 Papaver somniferum HOM05D001104 ORTHO05D006624 1.6e-252 875.5 425 100.0
PSO017G6424 Papaver somniferum HOM05D001104 ORTHO05D006624 1.5e-229 799.3 425 92.7
TAR374G1405 Trochodendron aralioides HOM05D001104 ORTHO05D006624 1.6e-199 699.5 428 79.7
Haze_14675 Corylus avellana HOM05D001104 ORTHO05D006624 5.8e-194 681.0 426 77.9
Cpa.g.sc215.8 Carica papaya HOM05D001104 ORTHO05D006624 9.9e-194 680.2 428 75.2
Dinv35069 Davidia involucrata HOM05D001104 ORTHO05D006624 2.2e-193 679.1 419 78.3
Prupe.3G285400 Prunus persica HOM05D001104 ORTHO05D006624 1.4e-192 676.4 437 75.3
Aqoxy3G01030 Aquilegia oxysepala HOM05D001104 ORTHO05D006624 5.4e-192 674.5 427 76.1
Oeu062922.1 Olea europaea HOM05D001104 ORTHO05D006624 1.2e-191 673.3 428 76.6
Hma1.2p1_0993F.1_g245480 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 2.1e-191 672.5 428 76.4
Dinv33487 Davidia involucrata HOM05D001104 ORTHO05D006624 3.5e-191 671.8 426 77.0
TWI12G0063 Tripterygium wilfordii HOM05D001104 ORTHO05D006624 4.6e-191 671.4 428 75.2
Potri.001G348700 Populus trichocarpa HOM05D001104 ORTHO05D006624 1.0e-190 670.2 428 75.0
MSTRG.15512 Avicennia marina HOM05D001104 ORTHO05D006624 3.0e-190 668.7 418 76.8
Ciclev10015353m.g Citrus clementina HOM05D001104 ORTHO05D006624 3.0e-190 668.7 428 75.7
Atru.chr6.2305 Acer truncatum HOM05D001104 ORTHO05D006624 3.9e-190 668.3 428 75.5
Nn4g22776 Nelumbo nucifera HOM05D001104 ORTHO05D006624 6.6e-190 667.5 429 75.3
CsaV3_5G027380 Cucumis sativus L. HOM05D001104 ORTHO05D006624 8.7e-190 667.2 430 74.9
CSS0039746 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.9e-189 666.0 419 76.8
Cc07_g02180 Coffea canephora HOM05D001104 ORTHO05D006624 1.9e-189 666.0 419 77.1
MD17G1034200 Malus domestica HOM05D001104 ORTHO05D006624 2.5e-189 665.6 449 73.1
MELO3C021546.2 Cucumis melo HOM05D001104 ORTHO05D006624 7.3e-189 664.1 430 74.9
Sed0005946 Sechium edule HOM05D001104 ORTHO05D006624 9.6e-189 663.7 428 74.5
CiPaw.03G038600 Carya illinoinensis HOM05D001104 ORTHO05D006624 2.1e-188 662.5 423 75.4
Eucgr.I01793 Eucalyptus grandis HOM05D001104 ORTHO05D006624 4.7e-188 661.4 426 75.6
Migut.H00115 Erythranthe guttata HOM05D001104 ORTHO05D006624 6.2e-188 661.0 428 75.9
Rhsim10G0021500 Rhododendron simsii HOM05D001104 ORTHO05D006624 6.2e-188 661.0 419 75.7
Actinidia35743 Actinidia chinensis HOM05D001104 ORTHO05D006624 1.4e-187 659.8 428 75.0
CSS0024274 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.4e-187 659.8 422 75.6
Nitab4.5_0001709g0040 Nicotiana tabacum HOM05D001104 ORTHO05D006624 4.0e-187 658.3 428 74.1
Duzib147G0036 Durio zibethinus HOM05D001104 ORTHO05D006624 3.4e-186 655.2 422 74.6
Solyc02g067740.4 Solanum lycopersicum HOM05D001104 ORTHO05D006624 4.4e-186 654.8 429 74.8
Thecc.04G010000 Theobroma cacao HOM05D001104 ORTHO05D006624 9.9e-186 653.7 423 74.7
Sopen02g016860 Solanum pennellii HOM05D001104 ORTHO05D006624 2.9e-185 652.1 429 74.6
RcHm_v2.0_Chr2g0171701 Rosa chinensis HOM05D001104 ORTHO05D006624 8.4e-185 650.6 438 71.7
Actinidia06020 Actinidia chinensis HOM05D001104 ORTHO05D006624 1.9e-184 649.4 419 74.7
PGR142G0881 Punica granatum HOM05D001104 ORTHO05D006624 7.1e-184 647.5 434 72.4
PGSC0003DMG400006955 Solanum tuberosum HOM05D001104 ORTHO05D006624 7.1e-184 647.5 429 74.4
FvH4_6g50760 Fragaria vesca HOM05D001104 ORTHO05D006624 1.0e-182 643.7 444 69.4
CAN.G973.9 Capsicum annuum HOM05D001104 ORTHO05D006624 1.7e-182 642.9 428 73.1
FAN14G0697 Fragaria x ananassa HOM05D001104 ORTHO05D006624 5.1e-182 641.3 444 69.1
MD09G1032600 Malus domestica HOM05D001104 ORTHO05D006624 6.6e-182 641.0 449 71.0
Gorai.001G262300 Gossypium raimondii HOM05D001104 ORTHO05D006624 1.5e-181 639.8 423 73.3
FAN05G2035 Fragaria x ananassa HOM05D001104 ORTHO05D006624 1.9e-181 639.4 444 69.1
Gohir.A07G220700 Gossypium hirsutum HOM05D001104 ORTHO05D006624 9.6e-181 637.1 423 73.0
GSVIVG01032469001 Vitis vinifera HOM05D001104 ORTHO05D006624 2.1e-180 636.0 423 72.8
SalBow1G5303 Salvia bowleyana HOM05D001104 ORTHO05D006624 2.4e-179 632.5 429 71.8
QL02p076349 Quercus lobata HOM05D001104 ORTHO05D006624 5.3e-179 631.3 428 71.7
CANSAT64G0855 Cannabis sativa HOM05D001104 ORTHO05D006624 6.9e-179 630.9 423 71.6
Lj7C592G4 Lonicera japonica HOM05D001104 ORTHO05D006624 4.9e-177 624.8 428 71.7
Medtr6g007040 Medicago truncatula HOM05D001104 ORTHO05D006624 4.2e-176 621.7 417 71.7
ECA232G2826 Erigeron canadensis HOM05D001104 ORTHO05D006624 9.3e-176 620.5 428 69.4
ClCG09G018970 Citrullus lanatus HOM05D001104 ORTHO05D006624 2.7e-175 619.0 480 64.6
Cfa007422 Carpinus fangiana HOM05D001104 ORTHO05D006624 4.6e-175 618.2 392 77.3
THA.LOC104825337 Tarenaya hassleriana HOM05D001104 ORTHO05D006624 2.3e-174 615.9 429 69.9
arahy.Tifrunner.gnm1.ann1.PA6DSG Arachis hypogaea HOM05D001104 ORTHO05D006624 3.0e-174 615.5 424 69.6
vmacro05831 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 3.9e-174 615.1 427 70.5
ECA238G2799 Erigeron canadensis HOM05D001104 ORTHO05D006624 1.5e-173 613.2 424 68.6
Sp2g16980 Schrenkiella parvula HOM05D001104 ORTHO05D006624 3.3e-173 612.1 429 69.2
COL.COLO4_28978 Corchorus olitorius HOM05D001104 ORTHO05D006624 4.3e-173 611.7 451 68.5
HanXRQChr14g0450311 Helianthus annuus HOM05D001104 ORTHO05D006624 1.6e-172 609.8 428 68.2
Peaxi162Scf00933g00005 Petunia axillaris HOM05D001104 ORTHO05D006624 1.1e-171 607.1 393 73.5
BcaC06g30950 Brassica carinata HOM05D001104 ORTHO05D006624 1.8e-171 606.3 430 68.6
Glyma.19G007900 Glycine max HOM05D001104 ORTHO05D006624 3.1e-171 605.5 424 69.8
VMungo0464G0407 Vigna mungo HOM05D001104 ORTHO05D006624 9.0e-171 604.0 423 68.3
Phvul.004G013700 Phaseolus vulgaris HOM05D001104 ORTHO05D006624 2.0e-170 602.8 424 69.1
Hma1.2p1_3249F.1_g334430 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 2.6e-170 602.4 395 73.4
BcaC06g33770 Brassica carinata HOM05D001104 ORTHO05D006624 2.9e-169 599.0 429 67.8
C07p37130 Brassica napus HOM05D001104 ORTHO05D006624 2.9e-169 599.0 429 67.8
arahy.Tifrunner.gnm1.ann1.S5BZSG Arachis hypogaea HOM05D001104 ORTHO05D006624 3.8e-169 598.6 444 65.8
MBI16_g05636_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006624 6.4e-169 597.8 395 72.9
Thhalv10004293m.g Eutrema salsugineum HOM05D001104 ORTHO05D006624 1.1e-168 597.0 427 69.3
HanXRQChr09g0266171 Helianthus annuus HOM05D001104 ORTHO05D006624 4.6e-167 591.7 413 68.5
Lalb_Chr06g0176011 Lupinus albus HOM05D001104 ORTHO05D006624 1.3e-166 590.1 413 68.0
DCAR_011201 Daucus carota HOM05D001104 ORTHO05D006624 3.9e-166 588.6 396 71.0
Gohir.D07G227400 Gossypium hirsutum HOM05D001104 ORTHO05D006624 9.6e-165 583.9 395 71.9
Lj2g0012499 Lotus japonicus HOM05D001104 ORTHO05D006624 1.1e-163 580.5 410 68.8
Ca_04192_v3 Cicer arietinum L. HOM05D001104 ORTHO05D006624 2.0e-162 576.2 416 67.8
Carub.0005s0650 Capsella rubella HOM05D001104 ORTHO05D006624 1.3e-161 573.5 422 65.4
ATR0730G148 Amborella trichopoda HOM05D001104 ORTHO05D006624 1.7e-161 573.2 428 66.1
AL5G17430 Arabidopsis lyrata HOM05D001104 ORTHO05D006624 1.7e-161 573.2 428 65.7
CARHR149500 Cardamine hirsuta HOM05D001104 ORTHO05D006624 1.7e-161 573.2 433 65.1
FAN02G3192 Fragaria x ananassa HOM05D001104 ORTHO05D006624 4.9e-161 571.6 499 58.9
AT3G27930 Arabidopsis thaliana HOM05D001104 ORTHO05D006624 1.9e-160 569.7 428 65.7
DCAR_015045 Daucus carota HOM05D001104 ORTHO05D006624 4.2e-160 568.5 452 62.2
EL10Ac4g08579 Beta vulgaris HOM05D001104 ORTHO05D006624 5.7e-157 558.1 416 64.4
SGA_v2.0_scaffold135G34875 Striga asiatica HOM05D001104 ORTHO05D006624 1.1e-155 553.9 372 73.9
Lsat_1_v5_gn_4_182480 Lactuca sativa HOM05D001104 ORTHO05D006624 1.4e-155 553.5 428 65.0
Os05g0577800 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 2.4e-155 552.7 418 63.6
CDE06G1183 Ceratophyllum demersum HOM05D001104 ORTHO05D006624 9.0e-155 550.8 425 63.5
CSS0016338 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 2.5e-149 532.7 456 61.2
Aa31LG2G4840 Aethionema arabicum HOM05D001104 ORTHO05D006285 6.3e-148 528.1 381 67.7
Sc03g0007930 Simmondsia chinensis HOM05D001104 ORTHO05D006624 1.5e-146 523.5 338 74.6
Manes.17G117000 Manihot esculenta HOM05D001104 ORTHO05D006624 1.5e-141 506.9 428 61.0
HPP92_024321 Vanilla planifolia HOM05D001104 ORTHO05D006285 1.1e-139 500.7 356 67.1
Nitab4.5_0001125g0070 Nicotiana tabacum HOM05D001104 ORTHO05D006624 1.7e-137 493.4 432 59.7
vmacro18250 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 9.4e-136 487.6 417 60.0
Oeu043054.1 Olea europaea HOM05D001104 ORTHO05D006285 3.9e-134 482.3 386 64.0
CSS0012459 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 4.5e-130 468.8 436 57.8
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 7.7e-130 468.0 409 59.9
Os05g0577900 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 5.7e-125 451.8 422 53.1
unitig_899.g15491 Utricularia gibba HOM05D000928 ORTHO05D001186 7.0e-123 444.9 401 56.6
Psat1g057160 Pisum sativum HOM05D001104 ORTHO05D006624 5.5e-120 435.3 302 69.5
A06p40770 Brassica napus HOM05D001104 ORTHO05D006624 5.0e-113 412.1 292 69.2
BolC7t44224H Brassica oleracea HOM05D001104 ORTHO05D006624 6.6e-113 411.8 291 69.1
AUR62029365 Chenopodium quinoa HOM05D001104 ORTHO05D006624 8.6e-113 411.4 421 51.3
BraA06t26998Z Brassica rapa HOM05D001104 ORTHO05D006624 1.5e-112 410.6 291 69.1
AagrBONN_evm.TU.Sc2ySwM_340.221 Anthoceros agrestis HOM05D001104 ORTHO05D006624 3.3e-112 409.5 427 48.0
Rhsim08G0054100 Rhododendron simsii HOM05D001104 ORTHO05D006285 2.3e-110 403.3 425 52.0
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 2.6e-109 399.8 436 51.1
AUR62043218 Chenopodium quinoa HOM05D001104 ORTHO05D006624 1.6e-106 390.6 419 51.1
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 4.5e-106 389.0 458 48.9
Pp3c25_9610 Physcomitrium patens HOM05D001104 ORTHO05D006624 4.4e-101 372.5 433 46.0
Zm00001eb344500 Zea mays HOM05D001104 ORTHO05D006624 4.3e-96 355.9 269 65.8
BolC2t11515H Brassica oleracea HOM05D001104 ORTHO05D006624 4.1e-91 339.3 636 35.8
Hund10304 Selenicereus undatus HOM05D001104 ORTHO05D006624 3.2e-83 313.2 263 58.9
HanXRQChr06g0175561 Helianthus annuus HOM05D001104 ORTHO05D006624 4.1e-83 312.8 286 55.6
A02p35680 Brassica napus HOM05D001104 ORTHO05D006624 7.3e-80 302.0 692 32.1
TPR.G2265 Trifolium pratense HOM05D001104 ORTHO05D006624 4.4e-77 292.7 193 72.0
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 2.2e-60 237.3 328 43.6
BraA02t08571Z Brassica rapa HOM05D001104 ORTHO05D006624 7.1e-59 232.3 544 32.5
Cfa008567 Carpinus fangiana HOM05D001104 ORTHO05D006624 4.5e-53 213.0 165 67.3
Psat0s3401g0080 Pisum sativum HOM05D001104 ORTHO05D006624 4.5e-53 213.0 145 70.3
A06p40780 Brassica napus HOM05D001104 ORTHO05D006624 2.9e-44 183.7 122 68.9
BraA02t08570Z Brassica rapa HOM05D001104 ORTHO05D006624 2.5e-40 170.6 107 72.9
SEGI_13753 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 2.5e-35 154.1 155 45.8
Oeu043225.1 Olea europaea HOM05D003428 ORTHO05D006624 2.2e-31 141.0 286 32.9
Oeu051906.1 Olea europaea HOM05D003428 ORTHO05D006624 6.3e-31 139.4 286 32.9
Psat1g219520 Pisum sativum HOM05D001104 ORTHO05D006624 8.2e-31 139.0 90 73.3
Glyma.05G007402 Glycine max HOM05D001104 ORTHO05D006624 3.8e-28 130.2 86 72.1
Actinidia36089 Actinidia chinensis HOM05D001104 ORTHO05D006624 9.1e-22 109.0 69 73.9
Thecc.04G111800 Theobroma cacao HOM05D001104 ORTHO05D006624 3.5e-21 107.1 85 57.6
BcaB07g30139 Brassica carinata HOM05D001104 ORTHO05D006624 8.8e-17 92.4 70 67.1
Cfa008566 Carpinus fangiana HOM05D001104 ORTHO05D006624 3.3e-16 90.5 57 78.9
Cre08.g358552 Chlamydomonas reinhardtii HOM05D001104 ORTHO05D006624 5.7e-16 89.7 461 24.3
SEGI_37884 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 6.3e-15 86.3 56 66.1
HanXRQChr16g0517041 Helianthus annuus HOM05D001104 ORTHO05D006624 2.0e-13 81.3 67 53.7
SEGI_12261 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 6.8e-09 66.2 54 59.3
TPR.G18830 Trifolium pratense HOM05D001104 ORTHO05D006624 4.8e-07 60.1 40 67.5
Sopen07g006450 Solanum pennellii HOM05D001104 ORTHO05D006624 3.1e-06 57.4 41 61.0


User provided reference genes

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