Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2622 Papaver somniferum HOM05D004585 ORTHO05D037280 2.0e-62 242.3 123 100.0
PSO447G0101 Papaver somniferum HOM05D004585 ORTHO05D037280 5.4e-52 207.6 129 85.3
PSO173G0033 Papaver somniferum HOM05D004585 ORTHO05D005640 3.0e-10 68.9 33 93.9
PSO675G5749 Papaver somniferum HOM05D004585 ORTHO05D005640 3.0e-10 68.9 33 93.9
PSO717G0039 Papaver somniferum HOM05D004585 ORTHO05D005640 3.0e-10 68.9 33 93.9
PSO210G0756 Papaver somniferum HOM05D004585 ORTHO05D005640 4.4e-09 65.1 33 87.9
CDE02G2408 Ceratophyllum demersum HOM05D000251 ORTHO05D002506 7.4e-09 64.3 33 84.8
Sc09g0005570 Simmondsia chinensis HOM05D004585 ORTHO05D005640 7.4e-09 64.3 33 81.8
CDE04G0123 Ceratophyllum demersum HOM05D004585 ORTHO05D005640 9.7e-09 63.9 33 81.8
Cc02_g10240 Coffea canephora HOM05D004585 ORTHO05D005640 1.3e-08 63.5 33 78.8
Aqoxy1G00240 Aquilegia oxysepala HOM05D004585 ORTHO05D005640 1.7e-08 63.2 46 60.9
Dinv30656 Davidia involucrata HOM05D004585 ORTHO05D005640 1.7e-08 63.2 36 75.0
Dinv20840 Davidia involucrata HOM05D004585 ORTHO05D005640 2.2e-08 62.8 34 79.4
Hma1.2p1_0567F.1_g180100 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 2.2e-08 62.8 33 84.8
QL04p041242 Quercus lobata HOM05D004585 ORTHO05D005640 2.2e-08 62.8 33 84.8
COL.COLO4_33895 Corchorus olitorius HOM05D004585 ORTHO05D005640 3.7e-08 62.0 33 78.8
Sabra10G0182000 Salix brachista HOM05D004585 ORTHO05D005640 3.7e-08 62.0 36 72.2
Duzib128G1105 Durio zibethinus HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 78.8
Gohir.A13G011400 Gossypium hirsutum HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 78.8
Gohir.D13G012100 Gossypium hirsutum HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 78.8
Gorai.013G013300 Gossypium raimondii HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 78.8
Rhsim03G0106100 Rhododendron simsii HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 75.8
Hund13887 Selenicereus undatus HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 81.8
Thecc.10G109700 Theobroma cacao HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 78.8
Thecc.K0008500 Theobroma cacao HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 78.8
vmacro07224 Vaccinium macrocarpon HOM05D004585 ORTHO05D037280 4.8e-08 61.6 33 75.8
vmacro21510 Vaccinium macrocarpon HOM05D004585 ORTHO05D005640 4.8e-08 61.6 33 75.8
Lj3A931T47 Lonicera japonica HOM05D004585 ORTHO05D005640 6.3e-08 61.2 33 78.8
Actinidia18578 Actinidia chinensis HOM05D004585 ORTHO05D005640 1.1e-07 60.5 33 72.7
CSS0035600 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 1.1e-07 60.5 33 72.7
Cfa011225 Carpinus fangiana HOM05D004585 ORTHO05D005640 1.1e-07 60.5 33 81.8
Cfa013557 Carpinus fangiana HOM05D004585 ORTHO05D005640 1.1e-07 60.5 33 81.8
Haze_02611 Corylus avellana HOM05D004585 ORTHO05D005640 1.1e-07 60.5 33 81.8
Hund06922 Selenicereus undatus HOM05D004585 ORTHO05D005640 1.1e-07 60.5 33 78.8
TAR633G1318 Trochodendron aralioides HOM05D004585 ORTHO05D005640 1.1e-07 60.5 33 75.8
COL.COLO4_14104 Corchorus olitorius HOM05D004585 ORTHO05D005736 1.4e-07 60.1 32 78.1
Lj9A82T44 Lonicera japonica HOM05D004585 ORTHO05D005640 1.4e-07 60.1 34 76.5
MD08G1243300 Malus domestica HOM05D004585 ORTHO05D005640 1.4e-07 60.1 36 72.2
Phvul.005G089300 Phaseolus vulgaris HOM05D004585 ORTHO05D005640 1.4e-07 60.1 33 81.8
GSVIVG01021851001 Vitis vinifera HOM05D004585 ORTHO05D005640 1.4e-07 60.1 33 78.8
Lalb_Chr22g0354511 Lupinus albus HOM05D004585 ORTHO05D005640 1.8e-07 59.7 33 81.8
Ah.16g102420 Amaranthus hybridus HOM05D004585 ORTHO05D005640 2.4e-07 59.3 37 64.9
TAR633G2635 Trochodendron aralioides HOM05D004585 ORTHO05D005640 2.4e-07 59.3 33 75.8
Actinidia06707 Actinidia chinensis HOM05D004585 ORTHO05D005640 3.1e-07 58.9 33 69.7
EL10Ac2g03709 Beta vulgaris HOM05D004585 ORTHO05D005640 3.1e-07 58.9 33 75.8
EL10Ac4g08675 Beta vulgaris HOM05D004585 ORTHO05D005640 3.1e-07 58.9 33 75.8
EL10Ac4g08678 Beta vulgaris HOM05D004585 ORTHO05D005640 3.1e-07 58.9 33 75.8
CSS0012030 Camellia sinensis var. sinensis HOM05D004585 ORTHO05D005640 3.1e-07 58.9 33 69.7
COL.COLO4_27310 Corchorus olitorius HOM05D004585 ORTHO05D005640 3.1e-07 58.9 33 78.8
ATR0068G115 Amborella trichopoda HOM05D004585 ORTHO05D005640 4.1e-07 58.5 33 75.8
Potri.010G234800 Populus trichocarpa HOM05D004585 ORTHO05D005640 4.1e-07 58.5 36 69.4
COL.COLO4_17533 Corchorus olitorius HOM05D001240 ORTHO05D002450 5.3e-07 58.2 32 75.0
Lalb_Chr14g0365991 Lupinus albus HOM05D004585 ORTHO05D005640 5.3e-07 58.2 33 78.8
Manes.05G202500 Manihot esculenta HOM05D004585 ORTHO05D005640 5.3e-07 58.2 36 69.4
Oeu027977.1 Olea europaea HOM05D004585 ORTHO05D005640 5.3e-07 58.2 33 75.8
Psat6g221600 Pisum sativum HOM05D004585 ORTHO05D005640 5.3e-07 58.2 33 78.8
Ah.03g136890 Amaranthus hybridus HOM05D004585 ORTHO05D005640 9.1e-07 57.4 33 69.7
arahy.Tifrunner.gnm1.ann1.48LUDE Arachis hypogaea HOM05D004585 ORTHO05D005640 9.1e-07 57.4 33 72.7
arahy.Tifrunner.gnm1.ann1.CB8VHN Arachis hypogaea HOM05D004585 ORTHO05D005640 9.1e-07 57.4 33 72.7
Migut.F01706 Erythranthe guttata HOM05D004585 ORTHO05D005640 9.1e-07 57.4 33 72.7
Eucgr.G02711 Eucalyptus grandis HOM05D004585 ORTHO05D005640 9.1e-07 57.4 33 75.8
THA.LOC104823192 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 9.1e-07 57.4 36 69.4
CiPaw.01G204400 Carya illinoinensis HOM05D004585 ORTHO05D005640 1.2e-06 57.0 33 78.8
HanXRQChr10g0319081 Helianthus annuus HOM05D004585 ORTHO05D005640 1.2e-06 57.0 33 78.8
HanXRQChr14g0456901 Helianthus annuus HOM05D004585 ORTHO05D005640 1.2e-06 57.0 33 78.8
CANSAT56G4487 Cannabis sativa HOM05D004585 ORTHO05D005640 1.5e-06 56.6 36 69.4
Ca_04982_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 1.5e-06 56.6 33 78.8
Ca_11096_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 1.5e-06 56.6 33 78.8
Medtr1g108290 Medicago truncatula HOM05D004585 ORTHO05D005640 1.5e-06 56.6 33 78.8
Nitab4.5_0003470g0110 Nicotiana tabacum HOM05D004585 ORTHO05D005640 1.5e-06 56.6 33 72.7
TPR.G4853 Trifolium pratense HOM05D004585 ORTHO05D005640 1.5e-06 56.6 33 75.8
PGSC0003DMG400000462 Solanum tuberosum HOM05D004585 ORTHO05D005640 2.0e-06 56.2 33 75.8
SGA_v2.0_scaffold10G05319 Striga asiatica HOM05D004585 ORTHO05D005640 2.0e-06 56.2 33 69.7
SGA_v2.0_scaffold154G37190 Striga asiatica HOM05D004585 ORTHO05D005640 2.0e-06 56.2 33 69.7
THA.LOC104816458 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 2.0e-06 56.2 36 69.4
VMungo1080G1669 Vigna mungo HOM05D004585 ORTHO05D005640 2.0e-06 56.2 33 78.8
Cpa.g.sc128.48 Carica papaya HOM05D004585 ORTHO05D005640 2.6e-06 55.8 36 66.7
Glyma.02G173000 Glycine max HOM05D004585 ORTHO05D005640 2.6e-06 55.8 33 72.7
Glyma.09G111400 Glycine max HOM05D004585 ORTHO05D005640 2.6e-06 55.8 33 72.7
Lj6g0005217 Lotus japonicus HOM05D004585 ORTHO05D005640 2.6e-06 55.8 33 75.8
SalBow6G2458 Salvia bowleyana HOM05D004585 ORTHO05D005640 2.6e-06 55.8 33 69.7
EL10Ac7g17659 Beta vulgaris HOM05D004585 ORTHO05D005640 3.4e-06 55.5 31 74.2
Ciclev10033004m.g Citrus clementina HOM05D004585 ORTHO05D005640 3.4e-06 55.5 36 66.7
Os08g0412200 Oryza sativa ssp. japonica HOM05D004585 ORTHO05D005640 3.4e-06 55.5 33 78.8
Sed0007729 Sechium edule HOM05D004585 ORTHO05D005640 3.4e-06 55.5 33 69.7
Sed0016970 Sechium edule HOM05D004585 ORTHO05D005640 3.4e-06 55.5 33 72.7
TWI38G0710 Tripterygium wilfordii HOM05D004585 ORTHO05D005640 3.4e-06 55.5 33 75.8
HPP92_008213 Vanilla planifolia HOM05D004585 ORTHO05D005640 3.4e-06 55.5 33 75.8
DCAR_001331 Daucus carota HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 72.7
DCAR_012470 Daucus carota HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 72.7
Lsat_1_v5_gn_2_86220 Lactuca sativa HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 72.7
Nitab4.5_0000442g0080 Nicotiana tabacum HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 72.7
Peaxi162Scf00150g00411 Petunia axillaris HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 75.8
RcHm_v2.0_Chr4g0433501 Rosa chinensis HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 75.8
Sopen11g026360 Solanum pennellii HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 72.7
SGA_v2.0_scaffold113G31721 Striga asiatica HOM05D004585 ORTHO05D005640 4.5e-06 55.1 33 66.7
MSTRG.412 Avicennia marina HOM05D004585 ORTHO05D005640 7.7e-06 54.3 33 69.7
AUR62003699 Chenopodium quinoa HOM05D004585 ORTHO05D005640 7.7e-06 54.3 33 69.7
AUR62018007 Chenopodium quinoa HOM05D004585 ORTHO05D005640 7.7e-06 54.3 33 69.7
MD15G1437000 Malus domestica HOM05D004585 ORTHO05D005640 7.7e-06 54.3 37 67.6
Prupe.1G580700 Prunus persica HOM05D004585 ORTHO05D005640 7.7e-06 54.3 33 69.7
TPR.G31410 Trifolium pratense HOM05D004585 ORTHO05D005640 7.7e-06 54.3 32 78.1


User provided reference genes

Program Settings