Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 0.0e+00 1100.5 588 100.0
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 1.7e-289 998.8 554 96.8
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 1.7e-199 699.9 555 67.7
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 2.4e-198 696.0 554 67.5
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 2.0e-152 543.5 535 55.5
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 5.8e-152 542.0 552 54.3
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.4e-150 536.6 553 53.0
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 5.4e-150 535.4 548 53.1
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 2.1e-149 533.5 553 53.3
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 1.6e-146 523.9 556 54.5
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 4.8e-146 522.3 588 50.7
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 8.1e-146 521.5 557 53.7
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 8.1e-146 521.5 573 51.5
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.1e-145 519.6 561 51.3
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 2.6e-144 516.5 552 54.2
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 2.2e-143 513.5 547 52.8
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 2.1e-141 506.9 565 50.4
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.8e-140 503.8 549 51.0
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 1.8e-137 493.8 582 49.5
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 3.1e-137 493.0 546 51.1
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.1e-137 493.0 553 52.1
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.1e-134 484.6 554 48.6
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 2.5e-134 483.4 553 48.8
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 2.5e-134 483.4 547 51.0
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 2.5e-131 473.4 554 48.4
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 3.3e-131 473.0 593 48.2
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 1.3e-130 471.1 545 49.2
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.6e-130 470.7 556 49.8
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 1.6e-130 470.7 551 49.0
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.1e-130 470.3 554 48.6
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.1e-130 470.3 554 48.6
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 3.7e-130 469.5 556 48.2
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 8.2e-130 468.4 553 49.5
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 8.2e-130 468.4 551 51.2
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 1.4e-129 467.6 550 48.7
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 4.0e-129 466.1 564 47.9
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.2e-128 464.5 572 47.4
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.5e-128 464.2 572 47.2
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 1.5e-128 464.2 551 48.6
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 3.4e-128 463.0 552 48.7
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 4.5e-128 462.6 546 48.4
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 1.7e-127 460.7 582 47.1
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.2e-127 460.3 567 48.3
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 6.5e-127 458.8 554 48.0
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.1e-126 458.0 558 47.7
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 2.5e-126 456.8 547 48.1
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 3.2e-126 456.4 589 46.9
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.5e-125 453.0 439 57.2
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 3.5e-125 453.0 554 46.6
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 4.6e-125 452.6 623 45.9
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 3.9e-124 449.5 550 47.6
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 7.4e-123 445.3 550 46.2
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.8e-122 442.6 577 45.1
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 6.3e-122 442.2 543 47.7
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 8.2e-122 441.8 556 47.7
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-121 441.0 550 45.8
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 3.1e-121 439.9 557 46.7
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 9.0e-121 438.3 578 44.8
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 9.0e-121 438.3 578 44.8
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.2e-120 438.0 550 45.3
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.5e-120 437.6 578 45.7
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.5e-120 436.0 577 44.4
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 2.2e-119 433.7 572 46.0
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.9e-118 430.6 559 45.8
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 2.5e-118 430.3 563 45.8
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 2.5e-118 430.3 554 45.1
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 4.2e-118 429.5 577 44.9
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 5.5e-118 429.1 546 44.9
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 7.2e-118 428.7 557 45.4
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 9.4e-118 428.3 547 46.8
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 2.7e-117 426.8 554 44.4
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 4.6e-117 426.0 551 46.5
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 1.4e-116 424.5 567 46.0
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 6.7e-116 422.2 569 44.6
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 8.8e-116 421.8 543 46.2
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 2.5e-115 420.2 561 43.7
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 4.3e-115 419.5 548 45.6
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 5.7e-115 419.1 508 48.2
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 9.7e-115 418.3 555 45.8
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 9.7e-115 418.3 579 43.9
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 8.2e-114 415.2 445 52.4
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.4e-113 414.5 576 43.2
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 1.8e-113 414.1 547 44.4
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 3.1e-113 413.3 581 44.9
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 5.3e-113 412.5 581 45.1
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 9.1e-113 411.8 571 45.0
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.2e-112 411.4 556 43.7
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 2.9e-111 406.8 556 43.2
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.9e-111 406.8 572 43.4
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.0e-111 406.0 574 43.4
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.1e-110 404.8 581 44.6
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.1e-107 394.8 365 60.8
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 4.4e-107 392.9 553 42.7
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 4.8e-106 389.4 552 42.9
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 1.1e-105 388.3 557 42.4
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 1.4e-105 387.9 549 44.1
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.3e-105 386.0 389 54.2
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 7.7e-104 382.1 554 41.7
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 1.6e-101 374.4 550 42.9
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 6.7e-100 369.0 553 40.5
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 1.1e-99 368.2 553 39.8
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 2.0e-99 367.5 553 40.0
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 5.7e-99 365.9 548 41.1
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 7.4e-99 365.5 553 38.9
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 8.2e-98 362.1 553 39.4
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 5.3e-97 359.4 555 38.0
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 9.1e-97 358.6 553 39.2
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 2.0e-96 357.5 566 39.6
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 2.0e-96 357.5 555 38.9
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 2.0e-96 357.5 553 39.2
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 2.0e-96 357.5 432 48.8
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 2.0e-96 357.5 355 56.3
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 2.2e-95 354.0 572 42.3
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 8.5e-95 352.1 553 43.0
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 7.2e-94 349.0 545 39.4
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 9.4e-94 348.6 555 38.7
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 1.6e-93 347.8 551 40.3
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 1.8e-92 344.4 434 44.2
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 5.2e-92 342.8 454 43.8
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 6.8e-92 342.4 435 46.9
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 9.1e-89 332.0 440 46.6
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 4.2e-86 323.2 461 42.3
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 5.5e-86 322.8 266 65.0
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 1.0e-79 302.0 545 36.7
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 5.7e-75 286.2 550 34.4
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 7.0e-73 279.3 545 34.5
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 9.2e-73 278.9 262 55.7
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.6e-69 266.9 329 48.3
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 6.2e-69 266.2 437 37.8
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.6e-64 251.5 446 37.2
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 6.8e-60 236.1 250 50.8
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 3.9e-47 193.7 346 35.5
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.8e-45 187.6 248 42.3
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 2.0e-43 181.4 372 33.3
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.1e-40 171.4 227 47.1
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 1.3e-39 168.7 491 28.5
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 9.9e-35 152.5 232 42.7
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.7e-34 151.8 164 50.6
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.2e-34 151.4 150 48.7
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.2e-34 151.4 153 54.9
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.8e-34 150.6 153 54.9
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 1.1e-33 149.1 528 26.3
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 1.2e-32 145.6 532 25.4
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 2.3e-31 141.4 162 43.2
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 4.8e-29 133.7 153 49.0
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.4e-28 132.1 195 44.6
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 4.0e-28 130.6 542 23.4
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 4.9e-26 123.6 139 49.6
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.9e-26 123.6 118 58.5
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 6.4e-26 123.2 148 45.3
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.2e-24 119.0 142 43.7
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 6.0e-24 116.7 553 23.1
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 3.9e-23 114.0 162 42.6
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 1.5e-22 112.1 157 35.7
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 2.5e-22 111.3 582 23.9
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 7.4e-22 109.8 163 41.7
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.6e-21 108.6 123 48.8
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 3.1e-20 104.4 95 57.9
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 1.2e-19 102.4 76 61.8
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 4.5e-19 100.5 127 46.5
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.8e-19 100.1 101 55.4
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.1e-17 95.9 133 43.6
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 7.1e-17 93.2 513 22.4
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 2.7e-16 91.3 454 22.9
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 7.9e-16 89.7 134 39.6
AagrBONN_evm.TU.Sc2ySwM_228.1577 Anthoceros agrestis HOM05D003578 ORTHO05D004021 5.1e-15 87.0 373 24.9
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 6.7e-15 86.7 123 40.7
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 1.1e-14 85.9 211 27.5
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.6e-13 82.0 65 60.0
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.4e-12 78.2 83 49.4
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 6.9e-12 76.6 111 39.6
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 9.0e-12 76.3 179 30.2
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.2e-11 75.9 71 60.6
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.7e-10 72.0 111 36.9
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 6.5e-10 70.1 68 54.4
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.1e-09 69.3 65 53.8
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.1e-09 69.3 65 53.8
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.5e-08 64.3 108 41.7
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 3.5e-08 64.3 82 36.6
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 6.1e-08 63.5 78 42.3
Sopen01g047030 Solanum pennellii HOM05D003578 ORTHO05D004021 3.0e-07 61.2 96 39.6
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 5.1e-07 60.5 54 57.4


User provided reference genes

Program Settings