Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1486 Papaver somniferum HOM05D013321 ORTHO05D302527 4.7e-135 484.6 250 100.0
PSO782G0334 Papaver somniferum HOM05D013321 ORTHO05D305364 7.5e-125 450.7 250 93.2
PSO478G3375 Papaver somniferum HOM05D013321 ORTHO05D302577 6.4e-100 367.9 254 78.3
PSO210G6715 Papaver somniferum HOM05D013321 ORTHO05D305304 9.8e-16 88.2 222 31.1
PSO765G0082 Papaver somniferum HOM05D013321 ORTHO05D304512 2.4e-14 83.6 276 30.8
PSO349G0025 Papaver somniferum HOM05D013321 ORTHO05D302247 5.4e-14 82.4 224 32.1
PSO675G8012 Papaver somniferum HOM05D013321 ORTHO05D304638 5.5e-11 72.4 279 27.2
PSO675G1393 Papaver somniferum HOM05D000062 ORTHO05D303422 2.1e-10 70.5 223 26.0
Zm00001eb043470 Zea mays HOM05D000062 ORTHO05D000043 2.3e-09 67.0 227 25.6
COL.COLO4_11679 Corchorus olitorius HOM05D000062 ORTHO05D000043 5.2e-09 65.9 287 25.4
Dinv08969 Davidia involucrata HOM05D000062 ORTHO05D000043 1.5e-08 64.3 226 26.5
PSO198G0009 Papaver somniferum HOM05D013321 ORTHO05D305121 1.5e-08 64.3 77 50.6
Os02g0774300 Oryza sativa ssp. japonica HOM05D000062 ORTHO05D000043 2.0e-08 63.9 227 25.1
Haze_10396 Corylus avellana HOM05D000062 ORTHO05D000043 2.6e-08 63.5 226 24.8
Migut.N01111 Erythranthe guttata HOM05D000062 ORTHO05D000043 2.6e-08 63.5 238 24.8
SalBow4G0839 Salvia bowleyana HOM05D000062 ORTHO05D000043 2.6e-08 63.5 238 25.2
Hund16614 Selenicereus undatus HOM05D000062 ORTHO05D000043 2.6e-08 63.5 228 24.6
EL10Ac6g13304 Beta vulgaris HOM05D000062 ORTHO05D000043 3.4e-08 63.2 215 25.1
Thecc.01G083800 Theobroma cacao HOM05D000062 ORTHO05D000043 3.4e-08 63.2 226 25.2
TAR625G0328 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.4e-08 63.2 226 26.1
Zm00001eb220140 Zea mays HOM05D000062 ORTHO05D000043 3.4e-08 63.2 227 24.2
CSS0049484 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D000043 4.4e-08 62.8 226 24.8
CARHR246320 Cardamine hirsuta HOM05D000062 ORTHO05D000043 4.4e-08 62.8 227 25.1
CiPaw.06G160800 Carya illinoinensis HOM05D000062 ORTHO05D000043 4.4e-08 62.8 226 24.3
MBI16_g36496_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 4.4e-08 62.8 226 25.7
Sp7g35550 Schrenkiella parvula HOM05D000062 ORTHO05D000043 4.4e-08 62.8 227 24.7
Aa31LG6G14830 Aethionema arabicum HOM05D000062 ORTHO05D000043 5.7e-08 62.4 226 24.3
Aqoxy5G00457 Aquilegia oxysepala HOM05D000062 ORTHO05D000043 5.7e-08 62.4 226 24.8
CiPaw.05G027000 Carya illinoinensis HOM05D000062 ORTHO05D000043 5.7e-08 62.4 226 24.8
BcaC01g00367 Brassica carinata HOM05D000062 ORTHO05D000043 7.5e-08 62.0 227 24.7
A08p22930 Brassica napus HOM05D000062 ORTHO05D000043 7.5e-08 62.0 227 24.7
C03p78930 Brassica napus HOM05D000062 ORTHO05D000043 7.5e-08 62.0 227 24.7
BolC3t20137H Brassica oleracea HOM05D000062 ORTHO05D000043 7.5e-08 62.0 227 24.7
BraA08t34255Z Brassica rapa HOM05D000062 ORTHO05D000043 7.5e-08 62.0 227 24.7
Gohir.D11G214600 Gossypium hirsutum HOM05D000062 ORTHO05D000043 7.5e-08 62.0 226 25.2
Ah.03g134380 Amaranthus hybridus HOM05D000062 ORTHO05D000043 9.8e-08 61.6 227 24.7
AL7G12740 Arabidopsis lyrata HOM05D000062 ORTHO05D000043 9.8e-08 61.6 226 23.9
C01p01280 Brassica napus HOM05D000062 ORTHO05D000043 9.8e-08 61.6 227 25.1
CSS0007341 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D000043 9.8e-08 61.6 226 24.3
Duzib147G0818 Durio zibethinus HOM05D000062 ORTHO05D000043 9.8e-08 61.6 226 25.2
Gohir.A11G208901 Gossypium hirsutum HOM05D000062 ORTHO05D000043 9.8e-08 61.6 226 25.2
Lalb_Chr15g0090271 Lupinus albus HOM05D000062 ORTHO05D000043 9.8e-08 61.6 226 23.9
Nn4g25090 Nelumbo nucifera HOM05D000062 ORTHO05D000043 9.8e-08 61.6 242 24.8
Os03g0113700 Oryza sativa ssp. japonica HOM05D000062 ORTHO05D000043 9.8e-08 61.6 227 25.1
Carub.0007s0231 Capsella rubella HOM05D000062 ORTHO05D000043 1.3e-07 61.2 227 24.7
Cc07_g07860 Coffea canephora HOM05D000062 ORTHO05D000043 1.3e-07 61.2 226 24.8
Gorai.008G018400 Gossypium raimondii HOM05D000062 ORTHO05D000043 1.3e-07 61.2 226 26.1
Lalb_Chr18g0060311 Lupinus albus HOM05D000062 ORTHO05D000043 1.3e-07 61.2 226 23.9
THA.LOC104804183 Tarenaya hassleriana HOM05D000062 ORTHO05D000043 1.3e-07 61.2 226 25.7
A01p01140 Brassica napus HOM05D000062 ORTHO05D000043 1.7e-07 60.8 205 25.9
BraA01t00112Z Brassica rapa HOM05D000062 ORTHO05D000043 1.7e-07 60.8 205 25.9
MBI16_g10453_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 1.7e-07 60.8 226 24.3
TAR381G0703 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.7e-07 60.8 226 24.3
ATR0800G178 Amborella trichopoda HOM05D000062 ORTHO05D000043 2.2e-07 60.5 226 23.9
Cfa004803 Carpinus fangiana HOM05D004672 ORTHO05D005732 2.2e-07 60.5 226 24.3
CDE02G4530 Ceratophyllum demersum HOM05D000062 ORTHO05D000043 2.2e-07 60.5 220 24.5
Ciclev10000502m.g Citrus clementina HOM05D000062 ORTHO05D000043 2.2e-07 60.5 220 24.1
Thhalv10012866m.g Eutrema salsugineum HOM05D000062 ORTHO05D000043 2.2e-07 60.5 227 24.7
Psat1g212880 Pisum sativum HOM05D000062 ORTHO05D000043 2.2e-07 60.5 226 23.9
Prupe.8G075000 Prunus persica HOM05D000062 ORTHO05D000043 2.2e-07 60.5 226 24.3
SMO347G0010 Selaginella moellendorffii HOM05D000062 ORTHO05D000043 2.2e-07 60.5 227 25.6
THA.LOC104807660 Tarenaya hassleriana HOM05D000062 ORTHO05D000043 2.2e-07 60.5 226 25.7
TWI14G0191 Tripterygium wilfordii HOM05D000062 ORTHO05D000043 2.2e-07 60.5 226 23.5
VMungo0540G0883 Vigna mungo HOM05D000062 ORTHO05D000043 2.2e-07 60.5 226 23.9
Thhalv10024591m.g Eutrema salsugineum HOM05D000062 ORTHO05D000043 2.8e-07 60.1 227 24.7
Gohir.D12G018000 Gossypium hirsutum HOM05D000062 ORTHO05D000043 2.8e-07 60.1 226 25.2
Gohir.D12G018100 Gossypium hirsutum HOM05D000062 ORTHO05D000043 2.8e-07 60.1 226 25.2
Gorai.008G018200 Gossypium raimondii HOM05D000062 ORTHO05D000043 2.8e-07 60.1 226 25.2
Gorai.008G018300 Gossypium raimondii HOM05D000062 ORTHO05D000043 2.8e-07 60.1 226 25.2
Manes.10G094100 Manihot esculenta HOM05D000062 ORTHO05D000043 2.8e-07 60.1 226 25.7
HPP92_025413 Vanilla planifolia HOM05D000062 ORTHO05D000043 2.8e-07 60.1 226 24.3
GSVIVG01038517001 Vitis vinifera HOM05D000062 ORTHO05D000043 2.8e-07 60.1 226 24.8
BcaNung00961 Brassica carinata HOM05D000062 ORTHO05D000043 3.7e-07 59.7 205 25.4
BolC1t00125H Brassica oleracea HOM05D000062 ORTHO05D000043 3.7e-07 59.7 205 25.4
CiPaw.08G145300 Carya illinoinensis HOM05D000062 ORTHO05D000043 3.7e-07 59.7 226 25.2
Lsat_1_v5_gn_9_113681 Lactuca sativa HOM05D000062 ORTHO05D000043 3.7e-07 59.7 226 25.7
Manes.07G046700 Manihot esculenta HOM05D000062 ORTHO05D000043 3.7e-07 59.7 226 24.8
Rhsim05G0096400 Rhododendron simsii HOM05D000062 ORTHO05D000043 3.7e-07 59.7 226 24.3
SEGI_09923 Sequoiadendron giganteum HOM05D000062 ORTHO05D000043 3.7e-07 59.7 226 24.3
vmacro19597 Vaccinium macrocarpon HOM05D000062 ORTHO05D000043 3.7e-07 59.7 226 24.3
Cpa.g.sc20.39 Carica papaya HOM05D000062 ORTHO05D000043 4.9e-07 59.3 226 23.9
MD05G1049700 Malus domestica HOM05D000062 ORTHO05D000043 4.9e-07 59.3 226 23.9
Nn5g29781 Nelumbo nucifera HOM05D000062 ORTHO05D000043 4.9e-07 59.3 226 24.3
Oeu014205.1 Olea europaea HOM05D000062 ORTHO05D000043 4.9e-07 59.3 226 24.3
Thecc.02G125100 Theobroma cacao HOM05D000062 ORTHO05D000043 4.9e-07 59.3 226 24.8
arahy.Tifrunner.gnm1.ann1.3T7HHY Arachis hypogaea HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.5
arahy.Tifrunner.gnm1.ann1.XX30P2 Arachis hypogaea HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.5
MSTRG.5294 Avicennia marina HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 24.3
Ca_00180_v3 Cicer arietinum L. HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.5
DCAR_029280 Daucus carota HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.9
Duzib052G0770 Durio zibethinus HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 24.8
Gohir.A12G017300 Gossypium hirsutum HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 24.8
Gohir.A12G017400 Gossypium hirsutum HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 24.8
Lj6g0005143 Lotus japonicus HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.5
MD10G1056800 Malus domestica HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.9
Medtr4g092920 Medicago truncatula HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.5
Phvul.006G199800 Phaseolus vulgaris HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.5
Potri.009G079700 Populus trichocarpa HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 23.9
SalBow6G2802 Salvia bowleyana HOM05D000062 ORTHO05D000043 6.3e-07 58.9 226 24.3
Atru.chr6.1349 Acer truncatum HOM05D000062 ORTHO05D000043 8.3e-07 58.5 226 23.9
AT4G37910 Arabidopsis thaliana HOM05D000062 ORTHO05D000043 8.3e-07 58.5 227 23.8
BcaNung00964 Brassica carinata HOM05D000062 ORTHO05D000043 8.3e-07 58.5 205 24.9
Cre09.g393200 Chlamydomonas reinhardtii HOM05D000062 ORTHO05D000043 8.3e-07 58.5 233 25.3
Ciclev10027943m.g Citrus clementina HOM05D000062 ORTHO05D000043 8.3e-07 58.5 226 23.9
Eucgr.G01045 Eucalyptus grandis HOM05D000062 ORTHO05D000043 8.3e-07 58.5 226 23.9
Eucgr.I02583 Eucalyptus grandis HOM05D000062 ORTHO05D000043 8.3e-07 58.5 226 23.9
Oeu010514.1 Olea europaea HOM05D000062 ORTHO05D000043 8.3e-07 58.5 226 23.9
PRCOL_00001396 Prasinoderma coloniale HOM05D000062 ORTHO05D000043 8.3e-07 58.5 226 24.3
Sabra09G0061700 Salix brachista HOM05D000062 ORTHO05D000043 8.3e-07 58.5 226 24.3
unitig_0.g892 Utricularia gibba HOM05D000062 ORTHO05D000043 8.3e-07 58.5 216 25.0
MSTRG.20254 Avicennia marina HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.9
Cpa.g.sc755.2 Carica papaya HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.5
Glyma.08G065100 Glycine max HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.0
Nitab4.5_0002290g0040 Nicotiana tabacum HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.9
Nitab4.5_0004008g0070 Nicotiana tabacum HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.9
Phvul.002G215800 Phaseolus vulgaris HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.0
Sabra16G0177900 Salix brachista HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.9
Sc07g0000330 Simmondsia chinensis HOM05D000062 ORTHO05D000043 1.1e-06 58.2 194 24.7
TWI59G0217 Tripterygium wilfordii HOM05D000062 ORTHO05D000043 1.1e-06 58.2 226 23.5
Aqoxy4G02256 Aquilegia oxysepala HOM05D000062 ORTHO05D000043 1.4e-06 57.8 226 23.5
Haze_27056 Corylus avellana HOM05D000062 ORTHO05D000043 1.4e-06 57.8 239 26.8
Lj5A225T67 Lonicera japonica HOM05D000062 ORTHO05D000043 1.4e-06 57.8 226 23.5
Nn1g05670 Nelumbo nucifera HOM05D000062 ORTHO05D000043 1.4e-06 57.8 204 24.0
Ah.01g007230 Amaranthus hybridus HOM05D000062 ORTHO05D000043 1.8e-06 57.4 221 24.4
ATR0605G346 Amborella trichopoda HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 23.5
Duzib132G0431 Durio zibethinus HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 23.9
ECA240G2027 Erigeron canadensis HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 25.2
Glyma.13G254900 Glycine max HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 22.6
Glyma.15G059900 Glycine max HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 22.6
HanXRQChr05g0136881 Helianthus annuus HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 24.8
Hma1.2p1_2015F.1_g311135 Hydrangea macrophylla HOM05D000062 ORTHO05D000043 1.8e-06 57.4 238 25.2
Lsat_1_v5_gn_5_110901 Lactuca sativa HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 24.8
PSO339G6167 Papaver somniferum HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 24.3
PSO384G3876 Papaver somniferum HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 24.3
Psat7g103280 Pisum sativum HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 23.0
QL11p026591 Quercus lobata HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 23.5
unitig_61.g26047 Utricularia gibba HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 23.5
VMungo0251G1022 Vigna mungo HOM05D000062 ORTHO05D000043 1.8e-06 57.4 226 23.0
Aa31LG3G17460 Aethionema arabicum HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.5
arahy.Tifrunner.gnm1.ann1.G3H0B2 Arachis hypogaea HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.5
CANSAT56G2491 Cannabis sativa HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.0
MELO3C018045.2 Cucumis melo HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.9
CsaV3_4G014660 Cucumis sativus L. HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.9
FAN15G2921 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.5
FAN20G2947 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.5
FAN27G2951 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.5
MD17G1201200 Malus domestica HOM05D000062 ORTHO05D000043 2.4e-06 57.0 220 25.0
Prupe.3G077000 Prunus persica HOM05D000062 ORTHO05D000043 2.4e-06 57.0 220 25.0
RcHm_v2.0_Chr6g0269491 Rosa chinensis HOM05D000062 ORTHO05D000043 2.4e-06 57.0 226 23.5
FvH4_2g11170 Fragaria vesca HOM05D000062 ORTHO05D000043 3.1e-06 56.6 226 23.0
FAN24G1783 Fragaria x ananassa HOM05D000062 ORTHO05D000043 3.1e-06 56.6 226 23.0
HanXRQChr05g0136861 Helianthus annuus HOM05D000062 ORTHO05D000043 3.1e-06 56.6 226 24.8
MBI04_g42541_MAGBIO Magnolia biondii HOM05D000062 ORTHO05D000043 3.1e-06 56.6 226 22.6
Peaxi162Scf00003g03027 Petunia axillaris HOM05D000062 ORTHO05D000043 3.1e-06 56.6 226 23.5
Aqoxy6G00638 Aquilegia oxysepala HOM05D000062 ORTHO05D000043 4.1e-06 56.2 226 23.9
arahy.Tifrunner.gnm1.ann1.2BYT27 Arachis hypogaea HOM05D000062 ORTHO05D000043 4.1e-06 56.2 226 23.5
MSTRG.16632 Avicennia marina HOM05D000062 ORTHO05D000043 4.1e-06 56.2 226 23.5
Ca_18412_v3 Cicer arietinum L. HOM05D000062 ORTHO05D000043 4.1e-06 56.2 220 22.7
Thhalv10012864m.g Eutrema salsugineum HOM05D000062 ORTHO05D000043 4.1e-06 56.2 226 23.5
PGR042G2214 Punica granatum HOM05D000062 ORTHO05D000043 4.1e-06 56.2 226 23.5
Sed0014122 Sechium edule HOM05D000062 ORTHO05D000043 4.1e-06 56.2 226 23.9
TAR381G1394 Trochodendron aralioides HOM05D000062 ORTHO05D000043 4.1e-06 56.2 193 24.9
Ah.01g024160 Amaranthus hybridus HOM05D000062 ORTHO05D000043 5.4e-06 55.8 221 23.5
AT5G09590 Arabidopsis thaliana HOM05D000062 ORTHO05D000043 5.4e-06 55.8 204 23.5
ECA234G0499 Erigeron canadensis HOM05D000062 ORTHO05D000043 5.4e-06 55.8 204 25.0
Sp6g33780 Schrenkiella parvula HOM05D000062 ORTHO05D000043 5.4e-06 55.8 226 22.6
SGA_v2.0_scaffold32G12945 Striga asiatica HOM05D000062 ORTHO05D000043 5.4e-06 55.8 226 24.3
AL6G20000 Arabidopsis lyrata HOM05D000062 ORTHO05D000043 7.0e-06 55.5 204 23.5
Glyma.07G184300 Glycine max HOM05D000062 ORTHO05D000043 7.0e-06 55.5 226 22.6
Lalb_Chr16g0383071 Lupinus albus HOM05D000062 ORTHO05D000043 7.0e-06 55.5 226 22.1
Oeu010202.1 Olea europaea HOM05D000062 ORTHO05D000043 7.0e-06 55.5 226 23.5
PGR142G0450 Punica granatum HOM05D000062 ORTHO05D000043 7.0e-06 55.5 204 23.0
Sed0007852 Sechium edule HOM05D000062 ORTHO05D000043 7.0e-06 55.5 226 24.8
TPR.G16895 Trifolium pratense HOM05D000062 ORTHO05D000043 7.0e-06 55.5 227 24.2
TPR.G32642 Trifolium pratense HOM05D000062 ORTHO05D000043 7.0e-06 55.5 220 23.2
BcaB01g05662 Brassica carinata HOM05D000062 ORTHO05D000043 9.2e-06 55.1 226 22.6
ClCG10G009780 Citrullus lanatus HOM05D000062 ORTHO05D000043 9.2e-06 55.1 226 23.5
Oeu033796.1 Olea europaea HOM05D000062 ORTHO05D000043 9.2e-06 55.1 226 23.9
Psat7g057320 Pisum sativum HOM05D000062 ORTHO05D000043 9.2e-06 55.1 249 23.7
HPP92_018903 Vanilla planifolia HOM05D000062 ORTHO05D000043 9.2e-06 55.1 226 23.5
HPP92_018963 Vanilla planifolia HOM05D000062 ORTHO05D000043 9.2e-06 55.1 226 23.5


User provided reference genes

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