Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1426 Papaver somniferum HOM05D005415 ORTHO05D006242 1.9e-153 545.8 278 100.0
PSO017G0412 Papaver somniferum HOM05D005415 ORTHO05D006242 7.7e-46 188.3 437 37.1
PSO478G2612 Papaver somniferum HOM05D005415 ORTHO05D006242 5.0e-45 185.7 437 36.8
COL.COLO4_16633 Corchorus olitorius HOM05D005415 ORTHO05D006242 7.0e-31 138.7 304 33.9
Thecc.03G133700 Theobroma cacao HOM05D005415 ORTHO05D006242 1.6e-30 137.5 311 33.8
Cfa018765 Carpinus fangiana HOM05D005415 ORTHO05D006242 2.7e-30 136.7 310 32.9
Atru.chr6.1849 Acer truncatum HOM05D005415 ORTHO05D006242 7.7e-30 135.2 308 33.1
QL10p002178 Quercus lobata HOM05D005415 ORTHO05D006242 1.7e-29 134.0 312 34.0
Dinv11193 Davidia involucrata HOM05D005415 ORTHO05D006242 2.9e-29 133.3 304 35.2
Lj9C481T20 Lonicera japonica HOM05D005415 ORTHO05D006242 2.9e-29 133.3 304 35.5
Sed0003726 Sechium edule HOM05D005415 ORTHO05D006242 2.9e-29 133.3 309 34.3
Gohir.D07G053600 Gossypium hirsutum HOM05D005415 ORTHO05D006242 8.6e-29 131.7 324 33.3
Gorai.001G056700 Gossypium raimondii HOM05D005415 ORTHO05D006242 1.9e-28 130.6 324 33.3
TAR629G2415 Trochodendron aralioides HOM05D005415 ORTHO05D006242 2.5e-28 130.2 306 32.7
Eucgr.B00088 Eucalyptus grandis HOM05D005415 ORTHO05D006242 3.3e-28 129.8 326 31.9
Haze_07175 Corylus avellana HOM05D005415 ORTHO05D006242 2.8e-27 126.7 313 32.9
MELO3C026191.2 Cucumis melo HOM05D005415 ORTHO05D006242 3.6e-27 126.3 320 33.1
Duzib068G0666 Durio zibethinus HOM05D005415 ORTHO05D006242 3.6e-27 126.3 312 33.3
CsaV3_1G000400 Cucumis sativus L. HOM05D005415 ORTHO05D006242 1.8e-26 124.0 321 31.2
MSTRG.22895 Avicennia marina HOM05D005415 ORTHO05D006242 4.0e-26 122.9 361 29.6
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 6.8e-26 122.1 358 31.0
CiPaw.13G052100 Carya illinoinensis HOM05D005415 ORTHO05D006242 8.9e-26 121.7 301 29.9
Manes.06G122000 Manihot esculenta HOM05D005415 ORTHO05D006242 2.6e-25 120.2 325 32.6
Sopen12g001850 Solanum pennellii HOM05D005415 ORTHO05D006242 4.4e-25 119.4 368 30.7
Nn4g22247 Nelumbo nucifera HOM05D005415 ORTHO05D006242 5.7e-25 119.0 310 30.6
Solyc05g014400.4 Solanum lycopersicum HOM05D005415 ORTHO05D006242 7.5e-25 118.6 357 30.3
Sopen05g009520 Solanum pennellii HOM05D005415 ORTHO05D006242 7.5e-25 118.6 357 30.5
Potri.015G100200 Populus trichocarpa HOM05D005415 ORTHO05D006242 9.8e-25 118.2 317 28.4
SGA_v2.0_scaffold414G51200 Striga asiatica HOM05D005415 ORTHO05D006242 1.7e-24 117.5 355 28.7
Nitab4.5_0001213g0090 Nicotiana tabacum HOM05D005415 ORTHO05D006242 2.2e-24 117.1 355 29.6
Solyc12g005900.3 Solanum lycopersicum HOM05D005415 ORTHO05D006242 2.2e-24 117.1 357 28.3
AUR62043951 Chenopodium quinoa HOM05D005415 ORTHO05D006242 2.8e-24 116.7 321 31.8
Sabra15G0120800 Salix brachista HOM05D005415 ORTHO05D006242 3.7e-24 116.3 320 29.7
THA.LOC104798938 Tarenaya hassleriana HOM05D005415 ORTHO05D006242 4.9e-24 115.9 332 31.3
Ciclev10031056m.g Citrus clementina HOM05D005415 ORTHO05D006242 8.3e-24 115.2 302 31.5
Migut.I00557 Erythranthe guttata HOM05D005415 ORTHO05D006242 8.3e-24 115.2 363 28.1
SalBow5G0795 Salvia bowleyana HOM05D005415 ORTHO05D006242 8.3e-24 115.2 357 29.1
Phvul.002G284900 Phaseolus vulgaris HOM05D005415 ORTHO05D006242 1.4e-23 114.4 357 28.3
PGR083G0902 Punica granatum HOM05D005415 ORTHO05D006242 1.4e-23 114.4 335 30.1
AUR62038846 Chenopodium quinoa HOM05D005415 ORTHO05D006242 4.1e-23 112.8 341 29.9
AUR62029576 Chenopodium quinoa HOM05D005415 ORTHO05D006242 5.4e-23 112.5 347 29.7
Ca_17566_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 5.4e-23 112.5 319 28.8
Ca_29727_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 5.4e-23 112.5 319 28.8
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 5.4e-23 112.5 355 28.2
AL8G40620 Arabidopsis lyrata HOM05D005415 ORTHO05D006242 9.2e-23 111.7 345 30.4
GSVIVG01008582001 Vitis vinifera HOM05D005415 ORTHO05D006242 9.2e-23 111.7 333 30.9
CAN.G2034.2 Capsicum annuum HOM05D005415 ORTHO05D006242 2.7e-22 110.2 357 27.7
Carub.0008s2427 Capsella rubella HOM05D005415 ORTHO05D006242 4.5e-22 109.4 320 31.9
Aa31LG1G18400 Aethionema arabicum HOM05D005415 ORTHO05D006242 7.8e-22 108.6 347 28.2
Lsat_1_v5_gn_4_82521 Lactuca sativa HOM05D005415 ORTHO05D006242 7.8e-22 108.6 363 28.1
VMungo0251G3541 Vigna mungo HOM05D005415 ORTHO05D006242 7.8e-22 108.6 404 25.5
ClCG06G018070 Citrullus lanatus HOM05D005415 ORTHO05D006242 1.3e-21 107.8 328 30.2
EL10Ac5g11383 Beta vulgaris HOM05D005415 ORTHO05D006242 3.9e-21 106.3 346 30.6
HanXRQChr09g0273461 Helianthus annuus HOM05D005415 ORTHO05D006242 1.1e-20 104.8 361 26.6
Sc10g0010570 Simmondsia chinensis HOM05D005415 ORTHO05D006242 1.1e-20 104.8 303 29.0
Nitab4.5_0003683g0010 Nicotiana tabacum HOM05D005415 ORTHO05D006242 1.5e-20 104.4 368 28.5
HPP92_021709 Vanilla planifolia HOM05D005415 ORTHO05D006242 3.3e-20 103.2 314 28.7
Rhsim08G0192500 Rhododendron simsii HOM05D005415 ORTHO05D006242 4.3e-20 102.8 268 32.5
Thhalv10003815m.g Eutrema salsugineum HOM05D005415 ORTHO05D006242 7.3e-20 102.1 345 29.6
Glyma.08G010700 Glycine max HOM05D005415 ORTHO05D006242 7.3e-20 102.1 410 27.1
Sp2g26630 Schrenkiella parvula HOM05D005415 ORTHO05D006242 9.5e-20 101.7 348 29.6
BcaC04g23337 Brassica carinata HOM05D005415 ORTHO05D006242 1.2e-19 101.3 351 29.1
A09p08330 Brassica napus HOM05D005415 ORTHO05D006242 1.2e-19 101.3 344 27.9
C09p09400 Brassica napus HOM05D005415 ORTHO05D006242 1.2e-19 101.3 351 29.1
FAN23G0140 Fragaria x ananassa HOM05D005415 ORTHO05D006242 1.2e-19 101.3 350 29.4
Zm00001eb085270 Zea mays HOM05D005415 ORTHO05D006242 1.6e-19 100.9 314 28.3
Actinidia18334 Actinidia chinensis HOM05D005415 ORTHO05D006242 2.1e-19 100.5 331 28.7
AT5G63540 Arabidopsis thaliana HOM05D005415 ORTHO05D006242 2.1e-19 100.5 344 29.9
CARHR277400 Cardamine hirsuta HOM05D005415 ORTHO05D006242 1.0e-18 98.2 339 28.9
unitig_8.g4692 Utricularia gibba HOM05D005415 ORTHO05D006242 1.4e-18 97.8 329 26.4
Hund02456 Selenicereus undatus HOM05D005415 ORTHO05D006242 2.3e-18 97.1 323 28.5
arahy.Tifrunner.gnm1.ann1.NCF6IW Arachis hypogaea HOM05D005415 ORTHO05D006242 8.9e-18 95.1 390 24.9
FAN26G2295 Fragaria x ananassa HOM05D005415 ORTHO05D006242 8.9e-18 95.1 350 28.3
HPP92_021694 Vanilla planifolia HOM05D005415 ORTHO05D006242 8.9e-18 95.1 314 28.0
BcaB04g19924 Brassica carinata HOM05D005415 ORTHO05D006242 1.5e-17 94.4 334 27.2
FAN28G1156 Fragaria x ananassa HOM05D005415 ORTHO05D006242 2.0e-17 94.0 350 28.0
RcHm_v2.0_Chr7g0189541 Rosa chinensis HOM05D005415 ORTHO05D006242 2.6e-17 93.6 351 28.2
Prupe.5G147700 Prunus persica HOM05D005415 ORTHO05D006242 3.4e-17 93.2 363 26.4
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 4.4e-17 92.8 385 26.2
FAN19G3201 Fragaria x ananassa HOM05D005415 ORTHO05D006242 2.9e-16 90.1 364 26.9
MBI07_g01996_MAGBIO Magnolia biondii HOM05D005415 ORTHO05D006242 8.3e-16 88.6 88 52.3
FvH4_1g26610 Fragaria vesca HOM05D005415 ORTHO05D006242 2.4e-15 87.0 364 26.6
BolC9t53852H Brassica oleracea HOM05D005415 ORTHO05D006242 7.0e-15 85.5 389 26.5
Oeu030666.2 Olea europaea HOM05D005415 ORTHO05D006242 1.2e-14 84.7 230 27.8
BraA09t36482Z Brassica rapa HOM05D005415 ORTHO05D006242 2.0e-14 84.0 385 25.2
vmacro19135 Vaccinium macrocarpon HOM05D005415 ORTHO05D006242 2.7e-14 83.6 258 30.6
Peaxi162Scf00047g00185 Petunia axillaris HOM05D005415 ORTHO05D006242 3.5e-14 83.2 99 42.4
CANSAT25G2590 Cannabis sativa HOM05D005415 ORTHO05D006242 6.0e-14 82.4 365 23.8
ATR0582G259 Amborella trichopoda HOM05D005415 ORTHO05D006242 7.8e-14 82.0 75 52.0
TPR.G12965 Trifolium pratense HOM05D005415 ORTHO05D006242 7.8e-14 82.0 88 45.5
Gohir.A07G049320 Gossypium hirsutum HOM05D005415 ORTHO05D006242 1.3e-13 81.3 102 47.1
Gohir.A07G049360 Gossypium hirsutum HOM05D005415 ORTHO05D006242 1.3e-13 81.3 74 52.7
Ah.11g045540 Amaranthus hybridus HOM05D005415 ORTHO05D006242 3.9e-13 79.7 316 27.8
Lalb_Chr13g0297171 Lupinus albus HOM05D005415 ORTHO05D006242 5.0e-13 79.3 72 50.0
Medtr8g096570 Medicago truncatula HOM05D005415 ORTHO05D006242 1.1e-12 78.2 88 43.2
Aqoxy3G01618 Aquilegia oxysepala HOM05D005415 ORTHO05D006242 2.5e-12 77.0 174 35.1
arahy.Tifrunner.gnm1.ann1.MQVT4E Arachis hypogaea HOM05D005415 ORTHO05D006242 2.5e-12 77.0 75 46.7
Psat7g037120 Pisum sativum HOM05D005415 ORTHO05D006242 3.3e-12 76.6 88 43.2
Lj4g0026231 Lotus japonicus HOM05D005415 ORTHO05D006242 4.3e-12 76.3 96 37.5
CDE05G0217 Ceratophyllum demersum HOM05D005415 ORTHO05D006242 1.6e-11 74.3 74 45.9
SMO146G0239 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 8.0e-11 72.0 303 24.8
ECA232G0893 Erigeron canadensis HOM05D005415 ORTHO05D006242 1.8e-10 70.9 89 38.2
Actinidia25556 Actinidia chinensis HOM05D005415 ORTHO05D006242 4.0e-10 69.7 95 44.2
PSO782G1992 Papaver somniferum HOM05D005415 ORTHO05D006242 4.0e-10 69.7 133 43.6
DCAR_021639 Daucus carota HOM05D005415 ORTHO05D006242 7.5e-09 65.5 396 23.2
SMO173G0006 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 7.5e-09 65.5 303 24.4
Cpa.g.sc4.162 Carica papaya HOM05D005415 ORTHO05D006242 1.3e-08 64.7 106 39.6
PSO013G0019 Papaver somniferum HOM05D005415 ORTHO05D006242 3.7e-08 63.2 144 35.4
Pp3c4_19920 Physcomitrium patens HOM05D005415 ORTHO05D006242 6.4e-08 62.4 69 44.9
SHI10702 Sapria himalayana HOM05D005415 ORTHO05D006242 1.1e-07 61.6 98 37.8
Os04g0391000 Oryza sativa ssp. japonica HOM05D005415 ORTHO05D006242 2.4e-07 60.5 98 37.8
SEGI_11582 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 9.2e-07 58.5 41 61.0
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 2.1e-06 57.4 146 29.5
TPR.G12905 Trifolium pratense HOM05D005415 ORTHO05D006242 4.6e-06 56.2 101 36.6
SMO146G0204 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 6.0e-06 55.8 276 23.9


User provided reference genes

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