Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 5.1e-75 284.3 137 100.0
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 4.2e-69 264.6 137 93.4
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 9.4e-37 157.1 142 58.5
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 3.0e-35 152.1 140 56.4
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 8.8e-35 150.6 139 57.6
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 7.4e-34 147.5 140 55.0
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 3.7e-33 145.2 142 55.6
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 8.2e-33 144.1 144 57.6
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 8.2e-33 144.1 139 58.3
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.1e-32 143.7 147 55.1
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 1.1e-32 143.7 139 58.3
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.4e-32 143.3 136 53.7
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 2.4e-32 142.5 143 54.5
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 3.1e-32 142.1 136 56.6
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 4.1e-32 141.7 137 54.0
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 4.1e-32 141.7 143 54.5
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 4.1e-32 141.7 136 57.4
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 4.1e-32 141.7 120 57.5
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 5.3e-32 141.4 135 54.1
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 9.1e-32 140.6 135 55.6
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 1.2e-31 140.2 144 54.9
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 1.5e-31 139.8 140 56.4
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.0e-31 139.4 136 55.9
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 2.0e-31 139.4 136 58.1
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 2.0e-31 139.4 142 57.0
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 2.0e-31 139.4 132 57.6
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 2.6e-31 139.0 143 53.8
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 4.5e-31 138.3 141 56.0
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 7.7e-31 137.5 133 57.9
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 1.0e-30 137.1 140 57.1
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 1.7e-30 136.3 86 69.8
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 2.2e-30 136.0 142 54.9
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 2.2e-30 136.0 131 55.0
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 2.2e-30 136.0 112 58.9
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 2.9e-30 135.6 144 50.0
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 5.0e-30 134.8 141 51.1
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 5.0e-30 134.8 141 51.1
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 5.0e-30 134.8 141 53.9
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 6.5e-30 134.4 143 53.1
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 8.5e-30 134.0 145 50.3
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 8.5e-30 134.0 136 52.2
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 1.1e-29 133.7 145 52.4
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 1.9e-29 132.9 137 53.3
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 3.2e-29 132.1 138 51.4
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 3.2e-29 132.1 138 51.4
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 5.5e-29 131.3 140 52.9
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 5.5e-29 131.3 140 52.9
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 9.4e-29 130.6 138 52.2
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 9.4e-29 130.6 132 54.5
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 1.2e-28 130.2 94 64.9
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 1.6e-28 129.8 110 56.4
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 1.6e-28 129.8 86 66.3
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 1.6e-28 129.8 139 53.2
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 1.6e-28 129.8 87 67.8
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 1.6e-28 129.8 140 49.3
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.6e-28 129.8 139 50.4
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 2.1e-28 129.4 141 51.1
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 2.7e-28 129.0 126 50.8
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 2.7e-28 129.0 94 67.0
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 2.7e-28 129.0 137 49.6
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 4.7e-28 128.3 142 48.6
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 6.1e-28 127.9 127 53.5
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 8.0e-28 127.5 145 49.0
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 1.0e-27 127.1 140 49.3
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 1.0e-27 127.1 132 52.3
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 1.4e-27 126.7 140 48.6
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 1.4e-27 126.7 128 56.2
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 1.8e-27 126.3 133 51.1
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 1.8e-27 126.3 128 51.6
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 2.3e-27 125.9 144 48.6
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 3.0e-27 125.6 140 47.1
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 3.0e-27 125.6 141 48.9
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 5.2e-27 124.8 147 51.0
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 5.2e-27 124.8 90 66.7
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 5.2e-27 124.8 85 70.6
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 6.7e-27 124.4 140 47.9
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 6.7e-27 124.4 121 52.9
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 8.8e-27 124.0 145 48.3
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 1.1e-26 123.6 134 50.7
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.5e-26 123.2 124 51.6
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 2.6e-26 122.5 162 45.1
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 3.3e-26 122.1 160 46.2
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 5.7e-26 121.3 146 49.3
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 9.7e-26 120.6 78 66.7
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 9.7e-26 120.6 91 62.6
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 9.7e-26 120.6 79 67.1
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 1.3e-25 120.2 104 55.8
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 4.8e-25 118.2 135 51.9
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 4.8e-25 118.2 83 68.7
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 6.3e-25 117.9 80 70.0
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 1.1e-24 117.1 142 47.9
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.8e-24 116.3 78 70.5
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 1.8e-24 116.3 138 45.7
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 9.1e-24 114.0 117 54.7
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 9.1e-24 114.0 134 50.7
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 1.2e-23 113.6 92 55.4
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.6e-23 113.2 98 55.1
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 2.0e-23 112.8 147 48.3
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 2.6e-23 112.5 120 50.0
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 4.5e-23 111.7 89 65.2
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 5.9e-23 111.3 91 61.5
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 7.7e-23 110.9 140 47.9
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.1e-21 107.1 137 46.7
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 1.5e-21 106.7 135 47.4
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 5.5e-21 104.8 108 50.0
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 7.2e-21 104.4 137 43.1
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 7.2e-21 104.4 101 49.5
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 2.1e-20 102.8 89 52.8
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 1.8e-19 99.8 77 58.4
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 5.2e-19 98.2 96 50.0
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 6.8e-19 97.8 94 54.3
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 3.4e-18 95.5 134 44.0
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 4.4e-18 95.1 68 63.2
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 5.3e-16 88.2 119 48.7
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.6e-15 86.7 102 48.0
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 3.5e-15 85.5 118 45.8
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 1.7e-14 83.2 73 57.5
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 1.5e-13 80.1 89 40.4
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 7.2e-13 77.8 86 43.0
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 9.4e-13 77.4 80 52.5
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 2.7e-12 75.9 66 54.5
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 1.0e-11 73.9 66 51.5
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 4.0e-11 72.0 121 40.5
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 3.4e-10 68.9 118 39.8
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 1.7e-09 66.6 117 40.2
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 8.3e-09 64.3 105 41.0
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 7.0e-08 61.2 110 38.2
Zm00001eb390880 Zea mays HOM05D001191 ORTHO05D000979 5.0e-06 55.1 88 35.2
AagrBONN_evm.TU.Sc2ySwM_344.2063 Anthoceros agrestis HOM05D006427 ORTHO05D008147 6.6e-06 54.7 102 41.2


User provided reference genes

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